RNA–Protein interactions for RNA: ENST00000520485.5

ARFGAP1-214, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-214ENST00000520485 FAM98CQ17RN3 349 aaKnown RBP30.41■■■□□ 2.46
ARFGAP1-214ENST00000520485 PNNQ9H307 717 aaKnown RBP30.4■■■□□ 2.46
ARFGAP1-214ENST00000520485 SALL2Q9Y467 1007 aaPredicted RBP30.4■■■□□ 2.46
ARFGAP1-214ENST00000520485 PKD1L3Q7Z443 1732 aa30.4■■■□□ 2.46
ARFGAP1-214ENST00000520485 ZNF772Q68DY9 489 aaPredicted RBP30.39■■■□□ 2.46
ARFGAP1-214ENST00000520485 GJD4Q96KN9 370 aaPredicted RBP30.39■■■□□ 2.46
ARFGAP1-214ENST00000520485 RGS17Q9UGC6 210 aaPredicted RBP30.39■■■□□ 2.46
ARFGAP1-214ENST00000520485 NEFMP07197 916 aa30.38■■■□□ 2.45
ARFGAP1-214ENST00000520485 NEUROD2Q15784 382 aa30.38■■■□□ 2.45
ARFGAP1-214ENST00000520485 MTHFSDQ2M296 383 aaKnown RBP30.38■■■□□ 2.45
ARFGAP1-214ENST00000520485 SHANK3Q9BYB0 1731 aa30.37■■■□□ 2.45
ARFGAP1-214ENST00000520485 LRRC37A3O60309 1634 aa30.37■■■□□ 2.45
ARFGAP1-214ENST00000520485 HNRNPUQ00839 825 aaKnown RBP eCLIP30.37■■■□□ 2.45
ARFGAP1-214ENST00000520485 THRAP3Q9Y2W1 955 aaKnown RBP30.37■■■□□ 2.45
ARFGAP1-214ENST00000520485 A0A0G2JS52 829 aa30.35■■■□□ 2.45
ARFGAP1-214ENST00000520485 MYT1Q01538 1121 aa30.35■■■□□ 2.45
ARFGAP1-214ENST00000520485 BARGINQ6ZT62 677 aa30.34■■■□□ 2.45
ARFGAP1-214ENST00000520485 DLG5Q8TDM6 1919 aa30.34■■■□□ 2.45
ARFGAP1-214ENST00000520485 THSD7AQ9UPZ6 1657 aa30.34■■■□□ 2.45
ARFGAP1-214ENST00000520485 PLEKHO1Q53GL0 409 aaPredicted RBP30.33■■■□□ 2.45
ARFGAP1-214ENST00000520485 ZNF530Q6P9A1 599 aaPredicted RBP30.33■■■□□ 2.45
ARFGAP1-214ENST00000520485 TMPOP42166 694 aaKnown RBP30.32■■■□□ 2.44
ARFGAP1-214ENST00000520485 NFE2L2Q16236 605 aa30.32■■■□□ 2.44
ARFGAP1-214ENST00000520485 TNS2Q63HR2 1409 aa30.31■■■□□ 2.44
ARFGAP1-214ENST00000520485 POTEAQ6S8J7 498 aa30.3■■■□□ 2.44
ARFGAP1-214ENST00000520485 ZCRB1Q8TBF4 217 aaKnown RBP30.3■■■□□ 2.44
ARFGAP1-214ENST00000520485 RIPK4P57078 832 aa30.29■■■□□ 2.44
ARFGAP1-214ENST00000520485 AMOTQ4VCS5 1084 aa30.29■■■□□ 2.44
ARFGAP1-214ENST00000520485 GAS2L2Q8NHY3 880 aa30.29■■■□□ 2.44
ARFGAP1-214ENST00000520485 SPG7Q9UQ90 795 aa30.29■■■□□ 2.44
ARFGAP1-214ENST00000520485 DDX54Q8TDD1 881 aaKnown RBP30.27■■■□□ 2.44
ARFGAP1-214ENST00000520485 CDCA7Q9BWT1 371 aaPredicted RBP30.27■■■□□ 2.44
ARFGAP1-214ENST00000520485 MAP3K5Q99683 1374 aa30.26■■■□□ 2.43
ARFGAP1-214ENST00000520485 CYP27B1O15528 508 aa30.26■■■□□ 2.43
ARFGAP1-214ENST00000520485 PCDH11XQ9BZA7 1347 aa30.25■■■□□ 2.43
ARFGAP1-214ENST00000520485 PCDH11YQ9BZA8 1340 aa30.25■■■□□ 2.43
ARFGAP1-214ENST00000520485 RBM6P78332 1123 aaKnown RBP30.25■■■□□ 2.43
ARFGAP1-214ENST00000520485 DDB1Q16531 1140 aa30.25■■■□□ 2.43
ARFGAP1-214ENST00000520485 PLEKHG2Q9H7P9 1386 aa30.24■■■□□ 2.43
ARFGAP1-214ENST00000520485 DCTN1Q14203 1278 aa30.24■■■□□ 2.43
ARFGAP1-214ENST00000520485 C1orf141Q5JVX7 400 aa30.24■■■□□ 2.43
ARFGAP1-214ENST00000520485 THUMPD2Q9BTF0 503 aaKnown RBP30.24■■■□□ 2.43
ARFGAP1-214ENST00000520485 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.24■■■□□ 2.434e-13■□□□□ 9.9
ARFGAP1-214ENST00000520485 PHKG2P15735 406 aa30.23■■■□□ 2.43
ARFGAP1-214ENST00000520485 EXOC5O00471 708 aa30.22■■■□□ 2.43
ARFGAP1-214ENST00000520485 SEPT12Q8IYM1 358 aa30.22■■■□□ 2.43
ARFGAP1-214ENST00000520485 TRIM35Q9UPQ4 493 aa30.22■■■□□ 2.43
ARFGAP1-214ENST00000520485 MCM10Q7L590 875 aa30.22■■■□□ 2.43
ARFGAP1-214ENST00000520485 RXRBP28702 533 aa30.21■■■□□ 2.43
ARFGAP1-214ENST00000520485 AKAP4Q5JQC9 854 aa30.21■■■□□ 2.43
ARFGAP1-214ENST00000520485 GNAT3A8MTJ3 354 aa30.2■■■□□ 2.42
ARFGAP1-214ENST00000520485 MPRIPQ6WCQ1 1025 aa30.2■■■□□ 2.42
ARFGAP1-214ENST00000520485 IFNL2Q8IZJ0 200 aa30.2■■■□□ 2.42
ARFGAP1-214ENST00000520485 VIRMAQ69YN4 1812 aaKnown RBP30.19■■■□□ 2.42
ARFGAP1-214ENST00000520485 BRWD3Q6RI45 1802 aa30.19■■■□□ 2.42
ARFGAP1-214ENST00000520485 RGS12O14924 1447 aa30.18■■■□□ 2.42
ARFGAP1-214ENST00000520485 KDM6AO15550 1401 aaPredicted RBP30.18■■■□□ 2.42
ARFGAP1-214ENST00000520485 ONECUT3O60422 494 aaPredicted RBP30.17■■■□□ 2.42
ARFGAP1-214ENST00000520485 MARCH10Q8NA82 808 aaPredicted RBP30.17■■■□□ 2.42
ARFGAP1-214ENST00000520485 TOGARAM1Q9Y4F4 1720 aa30.16■■■□□ 2.42
ARFGAP1-214ENST00000520485 WWC1Q8IX03 1113 aa30.16■■■□□ 2.42
ARFGAP1-214ENST00000520485 RTF1Q92541 710 aaKnown RBP30.16■■■□□ 2.42
ARFGAP1-214ENST00000520485 LGR6Q9HBX8 967 aa30.16■■■□□ 2.42
ARFGAP1-214ENST00000520485 FAM182BQ5T319 152 aa30.15■■■□□ 2.42
ARFGAP1-214ENST00000520485 LMOD3Q0VAK6 560 aa30.14■■■□□ 2.42
ARFGAP1-214ENST00000520485 ZBED9Q6R2W3 1325 aa30.14■■■□□ 2.42
ARFGAP1-214ENST00000520485 ADAMTS7Q9UKP4 1686 aa30.13■■■□□ 2.41
ARFGAP1-214ENST00000520485 PDE3BQ13370 1112 aa30.13■■■□□ 2.41
ARFGAP1-214ENST00000520485 IL17REQ8NFR9 667 aa30.13■■■□□ 2.41
ARFGAP1-214ENST00000520485 SCN11AQ9UI33 1791 aa30.13■■■□□ 2.41
ARFGAP1-214ENST00000520485 CCDC27Q2M243 656 aa30.12■■■□□ 2.41
ARFGAP1-214ENST00000520485 ZNF521Q96K83 1311 aa30.12■■■□□ 2.41
ARFGAP1-214ENST00000520485 DOT1LQ8TEK3 1739 aa30.12■■■□□ 2.41
ARFGAP1-214ENST00000520485 RNMTO43148 476 aaKnown RBP30.12■■■□□ 2.41
ARFGAP1-214ENST00000520485 HTATSF1O43719 755 aaKnown RBP30.08■■■□□ 2.41
ARFGAP1-214ENST00000520485 DCAF5Q96JK2 942 aa30.08■■■□□ 2.41
ARFGAP1-214ENST00000520485 CEMIPQ8WUJ3 1361 aa30.08■■■□□ 2.41
ARFGAP1-214ENST00000520485 HSP90AB1P08238 724 aaKnown RBP30.07■■■□□ 2.4
ARFGAP1-214ENST00000520485 NKX1-1Q15270 411 aaPredicted RBP30.07■■■□□ 2.4
ARFGAP1-214ENST00000520485 NGEFQ8N5V2 710 aa30.06■■■□□ 2.4
ARFGAP1-214ENST00000520485 NCBP3Q53F19 620 aaKnown RBP30.06■■■□□ 2.4
ARFGAP1-214ENST00000520485 CDCA7LQ96GN5 454 aa30.06■■■□□ 2.4
ARFGAP1-214ENST00000520485 SPINK5Q9NQ38 1064 aaPredicted RBP30.06■■■□□ 2.4
ARFGAP1-214ENST00000520485 LAS1LQ9Y4W2 734 aaKnown RBP30.06■■■□□ 2.4
ARFGAP1-214ENST00000520485 MRC1P22897 1456 aa30.05■■■□□ 2.4
ARFGAP1-214ENST00000520485 KRT27Q7Z3Y8 459 aa30.05■■■□□ 2.4
ARFGAP1-214ENST00000520485 ACSBG1Q96GR2 724 aa30.05■■■□□ 2.4
ARFGAP1-214ENST00000520485 SIPA1L3O60292 1781 aaPredicted RBP30.03■■■□□ 2.4
ARFGAP1-214ENST00000520485 TEFQ10587 303 aa30.01■■■□□ 2.4
ARFGAP1-214ENST00000520485 MIS18AQ9NYP9 233 aa30.01■■■□□ 2.4
ARFGAP1-214ENST00000520485 GOLGA2Q08379 1002 aa30.01■■■□□ 2.39
ARFGAP1-214ENST00000520485 SYTL4Q96C24 671 aaPredicted RBP30.01■■■□□ 2.39
ARFGAP1-214ENST00000520485 ITGB4P16144 1822 aa30.01■■■□□ 2.39
ARFGAP1-214ENST00000520485 WDR63Q8IWG1 891 aa30■■■□□ 2.39
ARFGAP1-214ENST00000520485 SLC52A2Q9HAB3 445 aa30■■■□□ 2.39
ARFGAP1-214ENST00000520485 CABP4P57796 275 aa29.99■■■□□ 2.39
ARFGAP1-214ENST00000520485 TSR2Q969E8 191 aaKnown RBP29.99■■■□□ 2.39
ARFGAP1-214ENST00000520485 NFATC2IPQ8NCF5 419 aa29.98■■■□□ 2.39
ARFGAP1-214ENST00000520485 KAT6BQ8WYB5 2073 aa29.98■■■□□ 2.39
ARFGAP1-214ENST00000520485 EP400Q96L91 3159 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 785.7 ms