RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 SEMA3FQ13275 785 aa9.6□□□□□ -0.87
SKP1-207ENST00000520417 WASHC4Q2M389 1173 aa9.6□□□□□ -0.87
SKP1-207ENST00000520417 PRICKLE2Q7Z3G6 844 aa9.6□□□□□ -0.87
SKP1-207ENST00000520417 CYP2U1Q7Z449 544 aa9.6□□□□□ -0.87
SKP1-207ENST00000520417 NLRP3Q96P20 1036 aa9.6□□□□□ -0.87
SKP1-207ENST00000520417 CDCA7Q9BWT1 371 aaPredicted RBP9.6□□□□□ -0.87
SKP1-207ENST00000520417 COG6Q9Y2V7 657 aa9.6□□□□□ -0.87
SKP1-207ENST00000520417 A0A1W2PRU2 124 aa9.59□□□□□ -0.87
SKP1-207ENST00000520417 RAD21O60216 631 aa9.59□□□□□ -0.87
SKP1-207ENST00000520417 FOXD4L5Q5VV16 416 aaPredicted RBP9.59□□□□□ -0.87
SKP1-207ENST00000520417 RNF135Q8IUD6 432 aa9.59□□□□□ -0.87
SKP1-207ENST00000520417 WWC1Q8IX03 1113 aa9.59□□□□□ -0.87
SKP1-207ENST00000520417 CCDC85AQ96PX6 553 aaPredicted RBP9.59□□□□□ -0.87
SKP1-207ENST00000520417 WIPF1O43516 503 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 UBTFP17480 764 aaKnown RBP9.58□□□□□ -0.88
SKP1-207ENST00000520417 INSM1Q01101 510 aaPredicted RBP9.58□□□□□ -0.88
SKP1-207ENST00000520417 SLC27A3Q5K4L6 730 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 LYSMD3Q7Z3D4 306 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 CCDC155Q8N6L0 562 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 POM121Q96HA1 1249 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 ARHGEF10LQ9HCE6 1279 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 RAB6BQ9NRW1 208 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 DOLKQ9UPQ8 538 aa9.58□□□□□ -0.88
SKP1-207ENST00000520417 RHOQP17081 205 aa9.57□□□□□ -0.88
SKP1-207ENST00000520417 TMEM132AQ24JP5 1023 aa9.57□□□□□ -0.88
SKP1-207ENST00000520417 TSGA10IPQ3SY00 556 aa9.57□□□□□ -0.88
SKP1-207ENST00000520417 OXLD1Q5BKU9 147 aa9.57□□□□□ -0.88
SKP1-207ENST00000520417 OSBPL3Q9H4L5 887 aa9.57□□□□□ -0.88
SKP1-207ENST00000520417 CDC14CA4D256 554 aa9.56□□□□□ -0.88
SKP1-207ENST00000520417 FLIIQ13045 1269 aa9.55□□□□□ -0.88
SKP1-207ENST00000520417 SLC35F4A4IF30 521 aa9.54□□□□□ -0.88
SKP1-207ENST00000520417 RNF144AP50876 292 aaPredicted RBP9.54□□□□□ -0.88
SKP1-207ENST00000520417 USP4Q13107 963 aa9.53□□□□□ -0.88
SKP1-207ENST00000520417 TRAK2O60296 914 aa9.52□□□□□ -0.89
SKP1-207ENST00000520417 VWA5B2Q8N398 1253 aa9.52□□□□□ -0.89
SKP1-207ENST00000520417 GNRH1P01148 92 aa9.51□□□□□ -0.89
SKP1-207ENST00000520417 ITGA6P23229 1130 aa9.51□□□□□ -0.89
SKP1-207ENST00000520417 SOX11P35716 441 aa9.51□□□□□ -0.89
SKP1-207ENST00000520417 POU4F2Q12837 409 aa9.51□□□□□ -0.89
SKP1-207ENST00000520417 CLN3Q13286 438 aa9.51□□□□□ -0.89
SKP1-207ENST00000520417 PHTF2Q8N3S3 785 aa9.51□□□□□ -0.89
SKP1-207ENST00000520417 VSIG8P0DPA2 414 aa9.5□□□□□ -0.89
SKP1-207ENST00000520417 GPC1P35052 558 aa9.5□□□□□ -0.89
SKP1-207ENST00000520417 RIPOR1Q6ZS17 1223 aa9.5□□□□□ -0.89
SKP1-207ENST00000520417 PLPP7Q8NBV4 271 aa9.5□□□□□ -0.89
SKP1-207ENST00000520417 CNKSR1Q969H4 720 aa9.5□□□□□ -0.89
SKP1-207ENST00000520417 SIRT1Q96EB6 747 aa9.5□□□□□ -0.89
SKP1-207ENST00000520417 SENP3-EIF4A1A0A087X0R7 540 aa9.49□□□□□ -0.89
SKP1-207ENST00000520417 STAU1O95793 577 aaKnown RBP9.49□□□□□ -0.89
SKP1-207ENST00000520417 SV2AQ7L0J3 742 aa9.49□□□□□ -0.89
SKP1-207ENST00000520417 GPR161Q8N6U8 529 aaKnown RBP9.49□□□□□ -0.89
SKP1-207ENST00000520417 ZSCAN1Q8NBB4 408 aa9.49□□□□□ -0.89
SKP1-207ENST00000520417 GAS2L1Q99501 681 aaPredicted RBP9.49□□□□□ -0.89
SKP1-207ENST00000520417 GTF2E1P29083 439 aaPredicted RBP9.48□□□□□ -0.89
SKP1-207ENST00000520417 ESYT1Q9BSJ8 1104 aa9.48□□□□□ -0.89
SKP1-207ENST00000520417 PIK3CDO00329 1044 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 IL2RAP01589 272 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 SKIP12755 728 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 CENPCQ03188 943 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 ESCO1Q5FWF5 840 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 CNTNAP3BQ96NU0 1288 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 CNTNAP3Q9BZ76 1288 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 STK17AQ9UEE5 414 aa9.47□□□□□ -0.89
SKP1-207ENST00000520417 PHKA2P46019 1235 aa9.46□□□□□ -0.9
SKP1-207ENST00000520417 MAP7D1Q3KQU3 841 aa9.46□□□□□ -0.9
SKP1-207ENST00000520417 TMEM214Q6NUQ4 689 aaKnown RBP9.46□□□□□ -0.9
SKP1-207ENST00000520417 CLUAP1Q96AJ1 413 aa9.46□□□□□ -0.9
SKP1-207ENST00000520417 ZSCAN10Q96SZ4 725 aaPredicted RBP9.46□□□□□ -0.9
SKP1-207ENST00000520417 COL25A1Q9BXS0 654 aaPredicted RBP9.46□□□□□ -0.9
SKP1-207ENST00000520417 GRIP2Q9C0E4 1043 aa9.46□□□□□ -0.9
SKP1-207ENST00000520417 POM121CA8CG34 1229 aa9.45□□□□□ -0.9
SKP1-207ENST00000520417 NBPF10Q6P3W6 841 aaKnown RBP9.45□□□□□ -0.9
SKP1-207ENST00000520417 TAS1R3Q7RTX0 852 aa9.45□□□□□ -0.9
SKP1-207ENST00000520417 NBPF15Q8N660 670 aa9.45□□□□□ -0.9
SKP1-207ENST00000520417 TIMMDC1Q9NPL8 285 aa9.45□□□□□ -0.9
SKP1-207ENST00000520417 FAM181BA6NEQ2 426 aa9.44□□□□□ -0.9
SKP1-207ENST00000520417 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
SKP1-207ENST00000520417 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
SKP1-207ENST00000520417 ALG2Q9H553 416 aa9.44□□□□□ -0.9
SKP1-207ENST00000520417 ETNK1Q9HBU6 452 aa9.44□□□□□ -0.9
SKP1-207ENST00000520417 CUEDC1Q9NWM3 386 aaPredicted RBP9.44□□□□□ -0.9
SKP1-207ENST00000520417 TLR1Q15399 786 aa9.43□□□□□ -0.9
SKP1-207ENST00000520417 GNASQ5JWF2 1037 aa9.43□□□□□ -0.9
SKP1-207ENST00000520417 XAGE2Q96GT9 111 aa9.43□□□□□ -0.9
SKP1-207ENST00000520417 EML3Q32P44 896 aa9.42□□□□□ -0.9
SKP1-207ENST00000520417 DEPDC4Q8N2C3 294 aa9.42□□□□□ -0.9
SKP1-207ENST00000520417 SERTAD1Q9UHV2 236 aa9.42□□□□□ -0.9
SKP1-207ENST00000520417 CHIC2Q9UKJ5 165 aa9.42□□□□□ -0.9
SKP1-207ENST00000520417 DYRK1BQ9Y463 629 aa9.42□□□□□ -0.9
SKP1-207ENST00000520417 GDF10P55107 478 aa9.41□□□□□ -0.9
SKP1-207ENST00000520417 KRT76Q01546 638 aa9.41□□□□□ -0.9
SKP1-207ENST00000520417 PSME1Q06323 249 aa9.41□□□□□ -0.9
SKP1-207ENST00000520417 RNFT1Q5M7Z0 435 aa9.41□□□□□ -0.9
SKP1-207ENST00000520417 HDGFL1Q5TGJ6 251 aa9.41□□□□□ -0.9
SKP1-207ENST00000520417 GPAMQ9HCL2 828 aa9.41□□□□□ -0.9
SKP1-207ENST00000520417 SPATA31C2B4DYI2 1134 aa9.4□□□□□ -0.9
SKP1-207ENST00000520417 GPR25O00155 361 aa9.4□□□□□ -0.9
SKP1-207ENST00000520417 FOXR1Q6PIV2 292 aa9.4□□□□□ -0.9
SKP1-207ENST00000520417 H7C1W4 665 aa9.39□□□□□ -0.91
SKP1-207ENST00000520417 NCOA4Q13772 614 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms