RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 NBPF4Q96M43 638 aa22.28■■□□□ 1.16
IGHV3-42-201ENST00000520410 EMILIN1Q9Y6C2 1016 aa22.28■■□□□ 1.16
IGHV3-42-201ENST00000520410 SRCAPQ6ZRS2 3230 aa22.27■■□□□ 1.16
IGHV3-42-201ENST00000520410 BTAF1O14981 1849 aa22.27■■□□□ 1.15
IGHV3-42-201ENST00000520410 ZBTB7AO95365 584 aa22.26■■□□□ 1.15
IGHV3-42-201ENST00000520410 TNNT2P45379 298 aaPredicted RBP22.26■■□□□ 1.15
IGHV3-42-201ENST00000520410 INSRP06213 1382 aa22.25■■□□□ 1.15
IGHV3-42-201ENST00000520410 SLC15A2Q16348 729 aa22.25■■□□□ 1.15
IGHV3-42-201ENST00000520410 KAT6BQ8WYB5 2073 aa22.24■■□□□ 1.15
IGHV3-42-201ENST00000520410 DOT1LQ8TEK3 1739 aa22.24■■□□□ 1.15
IGHV3-42-201ENST00000520410 PRIM1P49642 420 aaKnown RBP22.23■■□□□ 1.15
IGHV3-42-201ENST00000520410 PDGFDQ9GZP0 370 aaPredicted RBP22.23■■□□□ 1.15
IGHV3-42-201ENST00000520410 ATF5Q9Y2D1 282 aaPredicted RBP22.22■■□□□ 1.15
IGHV3-42-201ENST00000520410 KIF24Q5T7B8 1368 aa22.21■■□□□ 1.15
IGHV3-42-201ENST00000520410 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
IGHV3-42-201ENST00000520410 CASZ1Q86V15 1759 aa22.2■■□□□ 1.14
IGHV3-42-201ENST00000520410 PCDH11XQ9BZA7 1347 aa22.19■■□□□ 1.14
IGHV3-42-201ENST00000520410 PCDH11YQ9BZA8 1340 aa22.19■■□□□ 1.14
IGHV3-42-201ENST00000520410 SHANK3Q9BYB0 1731 aa22.18■■□□□ 1.14
IGHV3-42-201ENST00000520410 PANK3Q9H999 370 aa22.18■■□□□ 1.14
IGHV3-42-201ENST00000520410 KCNQ4P56696 695 aa22.17■■□□□ 1.14
IGHV3-42-201ENST00000520410 ZNF827Q17R98 1081 aa22.15■■□□□ 1.14
IGHV3-42-201ENST00000520410 SLC27A3Q5K4L6 730 aa22.15■■□□□ 1.14
IGHV3-42-201ENST00000520410 LRRC4BQ9NT99 713 aa22.15■■□□□ 1.14
IGHV3-42-201ENST00000520410 CCNL1Q9UK58 526 aaPredicted RBP22.14■■□□□ 1.13
IGHV3-42-201ENST00000520410 MTFR1LQ9H019 292 aa22.13■■□□□ 1.13
IGHV3-42-201ENST00000520410 TFCP2L1Q9NZI6 479 aa22.13■■□□□ 1.13
IGHV3-42-201ENST00000520410 ANKRD26Q9UPS8 1709 aa22.13■■□□□ 1.13
IGHV3-42-201ENST00000520410 PAPPAQ13219 1627 aa22.13■■□□□ 1.13
IGHV3-42-201ENST00000520410 WASHC2AQ641Q2 1341 aa22.12■■□□□ 1.13
IGHV3-42-201ENST00000520410 MSH5O43196 834 aa22.12■■□□□ 1.13
IGHV3-42-201ENST00000520410 MPRIPQ6WCQ1 1025 aa22.12■■□□□ 1.13
IGHV3-42-201ENST00000520410 KLHL34Q8N239 644 aa22.12■■□□□ 1.13
IGHV3-42-201ENST00000520410 POLKQ9UBT6 870 aa22.12■■□□□ 1.13
IGHV3-42-201ENST00000520410 SPG7Q9UQ90 795 aa22.12■■□□□ 1.13
IGHV3-42-201ENST00000520410 MAP2P11137 1827 aaKnown RBP22.11■■□□□ 1.13
IGHV3-42-201ENST00000520410 MORC1Q86VD1 984 aa22.11■■□□□ 1.13
IGHV3-42-201ENST00000520410 NSD2O96028 1365 aa22.11■■□□□ 1.13
IGHV3-42-201ENST00000520410 KNSTRNQ9Y448 316 aa22.1■■□□□ 1.13
IGHV3-42-201ENST00000520410 EYA1Q99502 592 aa22.09■■□□□ 1.13
IGHV3-42-201ENST00000520410 CYP27B1O15528 508 aa22.07■■□□□ 1.12
IGHV3-42-201ENST00000520410 PTGER2P43116 358 aa22.07■■□□□ 1.12
IGHV3-42-201ENST00000520410 EIF4A2Q14240 407 aaKnown RBP22.07■■□□□ 1.12
IGHV3-42-201ENST00000520410 AKT1S1Q96B36 256 aa22.06■■□□□ 1.12
IGHV3-42-201ENST00000520410 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
IGHV3-42-201ENST00000520410 FHDC1Q9C0D6 1143 aaPredicted RBP22.05■■□□□ 1.12
IGHV3-42-201ENST00000520410 LY75O60449 1722 aa22.05■■□□□ 1.12
IGHV3-42-201ENST00000520410 PKD1L3Q7Z443 1732 aa22.05■■□□□ 1.12
IGHV3-42-201ENST00000520410 POLD1P28340 1107 aa22.04■■□□□ 1.12
IGHV3-42-201ENST00000520410 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
IGHV3-42-201ENST00000520410 ARXQ96QS3 562 aa22.04■■□□□ 1.12
IGHV3-42-201ENST00000520410 PNPLA7Q6ZV29 1317 aa22.04■■□□□ 1.12
IGHV3-42-201ENST00000520410 TMOD3Q9NYL9 352 aa22.02■■□□□ 1.12
IGHV3-42-201ENST00000520410 KIF7Q2M1P5 1343 aa22.02■■□□□ 1.12
IGHV3-42-201ENST00000520410 TOGARAM1Q9Y4F4 1720 aa22.01■■□□□ 1.11
IGHV3-42-201ENST00000520410 YY1P25490 414 aa22.01■■□□□ 1.11
IGHV3-42-201ENST00000520410 IFNL2Q8IZJ0 200 aa22.01■■□□□ 1.11
IGHV3-42-201ENST00000520410 SMARCC1Q92922 1105 aaPredicted RBP22.01■■□□□ 1.11
IGHV3-42-201ENST00000520410 NCAPD2Q15021 1401 aa22■■□□□ 1.11
IGHV3-42-201ENST00000520410 SLC16A10Q8TF71 515 aa21.99■■□□□ 1.11
IGHV3-42-201ENST00000520410 SYT17Q9BSW7 474 aa21.99■■□□□ 1.11
IGHV3-42-201ENST00000520410 TUBGCP6Q96RT7 1819 aa21.99■■□□□ 1.11
IGHV3-42-201ENST00000520410 PHKG2P15735 406 aa21.98■■□□□ 1.11
IGHV3-42-201ENST00000520410 AK7Q96M32 723 aa21.98■■□□□ 1.11
IGHV3-42-201ENST00000520410 C5P01031 1676 aa21.98■■□□□ 1.11
IGHV3-42-201ENST00000520410 MSL1Q68DK7 614 aa21.97■■□□□ 1.11
IGHV3-42-201ENST00000520410 PELP1Q8IZL8 1130 aaKnown RBP21.97■■□□□ 1.11
IGHV3-42-201ENST00000520410 PIGBQ92521 554 aa21.97■■□□□ 1.11
IGHV3-42-201ENST00000520410 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.97■■□□□ 1.11
IGHV3-42-201ENST00000520410 IGSF1Q8N6C5 1336 aa21.97■■□□□ 1.11
IGHV3-42-201ENST00000520410 QSER1Q2KHR3 1735 aa21.97■■□□□ 1.11
IGHV3-42-201ENST00000520410 ITGB4P16144 1822 aa21.96■■□□□ 1.11
IGHV3-42-201ENST00000520410 PHF14O94880 888 aa21.96■■□□□ 1.11
IGHV3-42-201ENST00000520410 HMGB2P26583 209 aaKnown RBP21.96■■□□□ 1.11
IGHV3-42-201ENST00000520410 PLEKHO1Q53GL0 409 aaPredicted RBP21.96■■□□□ 1.11
IGHV3-42-201ENST00000520410 SGIP1Q9BQI5 828 aa21.96■■□□□ 1.11
IGHV3-42-201ENST00000520410 CC2D1BQ5T0F9 858 aaKnown RBP21.95■■□□□ 1.1
IGHV3-42-201ENST00000520410 ZNF530Q6P9A1 599 aaPredicted RBP21.95■■□□□ 1.1
IGHV3-42-201ENST00000520410 NKX1-1Q15270 411 aaPredicted RBP21.94■■□□□ 1.1
IGHV3-42-201ENST00000520410 COL23A1Q86Y22 540 aaPredicted RBP21.94■■□□□ 1.1
IGHV3-42-201ENST00000520410 C1orf141Q5JVX7 400 aa21.93■■□□□ 1.1
IGHV3-42-201ENST00000520410 SULT6B1Q6IMI4 303 aa21.92■■□□□ 1.1
IGHV3-42-201ENST00000520410 AEBP1Q8IUX7 1158 aa21.92■■□□□ 1.1
IGHV3-42-201ENST00000520410 HSP90AB1P08238 724 aaKnown RBP21.91■■□□□ 1.1
IGHV3-42-201ENST00000520410 ASAP1Q9ULH1 1129 aa21.91■■□□□ 1.1
IGHV3-42-201ENST00000520410 C4BP0C0L5 1744 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 LOC102724428A0A0B4J2F2 783 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 ATP6V1AP38606 617 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 SIK1P57059 783 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 GPR162Q16538 588 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 AMOTQ4VCS5 1084 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 FLAD1Q8NFF5 587 aa21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 RBM42Q9BTD8 480 aaKnown RBP21.9■■□□□ 1.1
IGHV3-42-201ENST00000520410 AMER1Q5JTC6 1135 aaPredicted RBP21.89■■□□□ 1.09
IGHV3-42-201ENST00000520410 CABP4P57796 275 aa21.88■■□□□ 1.09
IGHV3-42-201ENST00000520410 DCAF5Q96JK2 942 aa21.88■■□□□ 1.09
IGHV3-42-201ENST00000520410 TAF1LQ8IZX4 1826 aa21.87■■□□□ 1.09
IGHV3-42-201ENST00000520410 MTHFSP49914 203 aa21.87■■□□□ 1.09
IGHV3-42-201ENST00000520410 GNPATO15228 680 aa21.86■■□□□ 1.09
IGHV3-42-201ENST00000520410 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms