RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 OVOS2A0A0G2JMS6 1433 aa23.59■■□□□ 1.37
SDC2-205ENST00000520233 PHACTR3Q96KR7 559 aa23.58■■□□□ 1.37
SDC2-205ENST00000520233 MAPK8IP3Q9UPT6 1336 aa23.58■■□□□ 1.36
SDC2-205ENST00000520233 PARP4Q9UKK3 1724 aaKnown RBP23.57■■□□□ 1.36
SDC2-205ENST00000520233 RBM6P78332 1123 aaKnown RBP23.57■■□□□ 1.36
SDC2-205ENST00000520233 FAM98CQ17RN3 349 aaKnown RBP23.57■■□□□ 1.36
SDC2-205ENST00000520233 AMOTQ4VCS5 1084 aa23.57■■□□□ 1.36
SDC2-205ENST00000520233 PLEKHO1Q53GL0 409 aaPredicted RBP23.57■■□□□ 1.36
SDC2-205ENST00000520233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.57■■□□□ 1.36
SDC2-205ENST00000520233 WNK3Q9BYP7 1800 aa23.56■■□□□ 1.36
SDC2-205ENST00000520233 ONECUT3O60422 494 aaPredicted RBP23.56■■□□□ 1.36
SDC2-205ENST00000520233 SPG7Q9UQ90 795 aa23.55■■□□□ 1.36
SDC2-205ENST00000520233 POTEAQ6S8J7 498 aa23.54■■□□□ 1.36
SDC2-205ENST00000520233 RXRBP28702 533 aa23.53■■□□□ 1.36
SDC2-205ENST00000520233 MTHFSDQ2M296 383 aaKnown RBP23.53■■□□□ 1.36
SDC2-205ENST00000520233 GAS2L2Q8NHY3 880 aa23.53■■□□□ 1.36
SDC2-205ENST00000520233 ZCRB1Q8TBF4 217 aaKnown RBP23.53■■□□□ 1.36
SDC2-205ENST00000520233 THSD7AQ9UPZ6 1657 aa23.52■■□□□ 1.36
SDC2-205ENST00000520233 EXOC5O00471 708 aa23.52■■□□□ 1.36
SDC2-205ENST00000520233 PKD1L3Q7Z443 1732 aa23.52■■□□□ 1.36
SDC2-205ENST00000520233 APAF1O14727 1248 aa23.5■■□□□ 1.35
SDC2-205ENST00000520233 NFE2L2Q16236 605 aa23.5■■□□□ 1.35
SDC2-205ENST00000520233 DDB1Q16531 1140 aa23.5■■□□□ 1.35
SDC2-205ENST00000520233 TNS2Q63HR2 1409 aa23.5■■□□□ 1.35
SDC2-205ENST00000520233 A0A0G2JS52 829 aa23.49■■□□□ 1.35
SDC2-205ENST00000520233 TMPOP42166 694 aaKnown RBP23.49■■□□□ 1.35
SDC2-205ENST00000520233 MYT1Q01538 1121 aa23.49■■□□□ 1.35
SDC2-205ENST00000520233 ZNF530Q6P9A1 599 aaPredicted RBP23.49■■□□□ 1.35
SDC2-205ENST00000520233 PCDH11XQ9BZA7 1347 aa23.49■■□□□ 1.35
SDC2-205ENST00000520233 PCDH11YQ9BZA8 1340 aa23.49■■□□□ 1.35
SDC2-205ENST00000520233 LRRC37A3O60309 1634 aa23.48■■□□□ 1.35
SDC2-205ENST00000520233 SEPT12Q8IYM1 358 aa23.48■■□□□ 1.35
SDC2-205ENST00000520233 CYP27B1O15528 508 aa23.46■■□□□ 1.35
SDC2-205ENST00000520233 NCBP3Q53F19 620 aaKnown RBP23.46■■□□□ 1.35
SDC2-205ENST00000520233 AKAP4Q5JQC9 854 aa23.46■■□□□ 1.35
SDC2-205ENST00000520233 IFNL2Q8IZJ0 200 aa23.46■■□□□ 1.35
SDC2-205ENST00000520233 PHKG2P15735 406 aa23.45■■□□□ 1.34
SDC2-205ENST00000520233 RIPK4P57078 832 aa23.45■■□□□ 1.34
SDC2-205ENST00000520233 C1orf141Q5JVX7 400 aa23.45■■□□□ 1.34
SDC2-205ENST00000520233 NGEFQ8N5V2 710 aa23.45■■□□□ 1.34
SDC2-205ENST00000520233 RRP7AQ9Y3A4 280 aaKnown RBP23.45■■□□□ 1.34
SDC2-205ENST00000520233 SHANK3Q9BYB0 1731 aa23.45■■□□□ 1.34
SDC2-205ENST00000520233 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
SDC2-205ENST00000520233 DDX54Q8TDD1 881 aaKnown RBP23.44■■□□□ 1.34
SDC2-205ENST00000520233 MAP3K5Q99683 1374 aa23.43■■□□□ 1.34
SDC2-205ENST00000520233 HTATSF1O43719 755 aaKnown RBP23.43■■□□□ 1.34
SDC2-205ENST00000520233 NEUROD2Q15784 382 aa23.43■■□□□ 1.34
SDC2-205ENST00000520233 PDE3BQ13370 1112 aa23.42■■□□□ 1.34
SDC2-205ENST00000520233 ILDR2Q71H61 639 aa23.42■■□□□ 1.34
SDC2-205ENST00000520233 HSP90AB1P08238 724 aaKnown RBP23.41■■□□□ 1.34
SDC2-205ENST00000520233 LMOD3Q0VAK6 560 aa23.41■■□□□ 1.34
SDC2-205ENST00000520233 NKX1-1Q15270 411 aaPredicted RBP23.41■■□□□ 1.34
SDC2-205ENST00000520233 CCDC27Q2M243 656 aa23.41■■□□□ 1.34
SDC2-205ENST00000520233 RGS12O14924 1447 aa23.41■■□□□ 1.34
SDC2-205ENST00000520233 SENP3-EIF4A1A0A087X0R7 540 aa23.4■■□□□ 1.34
SDC2-205ENST00000520233 HNRNPUQ00839 825 aaKnown RBP eCLIP23.4■■□□□ 1.34
SDC2-205ENST00000520233 MARCH10Q8NA82 808 aaPredicted RBP23.4■■□□□ 1.34
SDC2-205ENST00000520233 TRIM35Q9UPQ4 493 aa23.4■■□□□ 1.34
SDC2-205ENST00000520233 RTF1Q92541 710 aaKnown RBP23.39■■□□□ 1.33
SDC2-205ENST00000520233 DCAF5Q96JK2 942 aa23.39■■□□□ 1.33
SDC2-205ENST00000520233 DLG5Q8TDM6 1919 aa23.37■■□□□ 1.33
SDC2-205ENST00000520233 MPRIPQ6WCQ1 1025 aa23.37■■□□□ 1.33
SDC2-205ENST00000520233 KRT27Q7Z3Y8 459 aa23.37■■□□□ 1.33
SDC2-205ENST00000520233 SALL2Q9Y467 1007 aaPredicted RBP23.37■■□□□ 1.33
SDC2-205ENST00000520233 RNMTO43148 476 aaKnown RBP23.36■■□□□ 1.33
SDC2-205ENST00000520233 IL17REQ8NFR9 667 aa23.36■■□□□ 1.33
SDC2-205ENST00000520233 MCM10Q7L590 875 aa23.35■■□□□ 1.33
SDC2-205ENST00000520233 WWC1Q8IX03 1113 aa23.35■■□□□ 1.33
SDC2-205ENST00000520233 LGR6Q9HBX8 967 aa23.35■■□□□ 1.33
SDC2-205ENST00000520233 KDM6AO15550 1401 aaPredicted RBP23.34■■□□□ 1.33
SDC2-205ENST00000520233 DCTN1Q14203 1278 aa23.34■■□□□ 1.33
SDC2-205ENST00000520233 CEMIPQ8WUJ3 1361 aa23.34■■□□□ 1.33
SDC2-205ENST00000520233 ADAMTS7Q9UKP4 1686 aa23.34■■□□□ 1.33
SDC2-205ENST00000520233 BRWD3Q6RI45 1802 aa23.33■■□□□ 1.33
SDC2-205ENST00000520233 BCL9O00512 1426 aa23.33■■□□□ 1.32
SDC2-205ENST00000520233 ZNF521Q96K83 1311 aa23.32■■□□□ 1.32
SDC2-205ENST00000520233 ERVV-2B6SEH9 535 aa23.31■■□□□ 1.32
SDC2-205ENST00000520233 THUMPD2Q9BTF0 503 aaKnown RBP23.31■■□□□ 1.32
SDC2-205ENST00000520233 SCN11AQ9UI33 1791 aa23.3■■□□□ 1.32
SDC2-205ENST00000520233 CALD1Q05682 793 aaKnown RBP23.3■■□□□ 1.32
SDC2-205ENST00000520233 WDR63Q8IWG1 891 aa23.3■■□□□ 1.32
SDC2-205ENST00000520233 YTHDC1Q96MU7 727 aaKnown RBP23.3■■□□□ 1.32
SDC2-205ENST00000520233 ZBED9Q6R2W3 1325 aa23.3■■□□□ 1.32
SDC2-205ENST00000520233 FAM182BQ5T319 152 aa23.29■■□□□ 1.32
SDC2-205ENST00000520233 TEFQ10587 303 aa23.28■■□□□ 1.32
SDC2-205ENST00000520233 FAM196AQ6ZSG2 479 aa23.28■■□□□ 1.32
SDC2-205ENST00000520233 SLC52A2Q9HAB3 445 aa23.28■■□□□ 1.32
SDC2-205ENST00000520233 MRC1P22897 1456 aa23.28■■□□□ 1.32
SDC2-205ENST00000520233 CABP4P57796 275 aa23.27■■□□□ 1.32
SDC2-205ENST00000520233 TOGARAM1Q9Y4F4 1720 aa23.27■■□□□ 1.32
SDC2-205ENST00000520233 IL16Q14005 1332 aa23.26■■□□□ 1.31
SDC2-205ENST00000520233 VIRMAQ69YN4 1812 aaKnown RBP23.25■■□□□ 1.31
SDC2-205ENST00000520233 SOCS7O14512 581 aa23.25■■□□□ 1.31
SDC2-205ENST00000520233 TAF7Q15545 349 aaPredicted RBP23.25■■□□□ 1.31
SDC2-205ENST00000520233 NFATC2IPQ8NCF5 419 aa23.25■■□□□ 1.31
SDC2-205ENST00000520233 ACSBG1Q96GR2 724 aa23.25■■□□□ 1.31
SDC2-205ENST00000520233 DOT1LQ8TEK3 1739 aa23.25■■□□□ 1.31
SDC2-205ENST00000520233 PRIM1P49642 420 aaKnown RBP23.24■■□□□ 1.31
SDC2-205ENST00000520233 GOLGA2Q08379 1002 aa23.24■■□□□ 1.31
SDC2-205ENST00000520233 IFT57Q9NWB7 429 aa23.23■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms