RNA–Protein interactions for RNA: ENST00000520003.5

CSGALNACT1-208, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 4

Gene CSGALNACT1, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-208ENST00000520003 MEGF6O75095 1541 aa22.15■■□□□ 1.14
CSGALNACT1-208ENST00000520003 DOT1LQ8TEK3 1739 aa22.14■■□□□ 1.14
CSGALNACT1-208ENST00000520003 GOLGB1Q14789 3259 aaKnown RBP22.14■■□□□ 1.14
CSGALNACT1-208ENST00000520003 POLD1P28340 1107 aa22.14■■□□□ 1.13
CSGALNACT1-208ENST00000520003 GPR162Q16538 588 aa22.14■■□□□ 1.13
CSGALNACT1-208ENST00000520003 COG3Q96JB2 828 aa22.14■■□□□ 1.13
CSGALNACT1-208ENST00000520003 TFCP2L1Q9NZI6 479 aa22.14■■□□□ 1.13
CSGALNACT1-208ENST00000520003 FBLN1P23142 703 aa22.13■■□□□ 1.13
CSGALNACT1-208ENST00000520003 ZCRB1Q8TBF4 217 aaKnown RBP22.13■■□□□ 1.13
CSGALNACT1-208ENST00000520003 SYTL4Q96C24 671 aaPredicted RBP22.13■■□□□ 1.13
CSGALNACT1-208ENST00000520003 RTL1A6NKG5 1358 aa22.12■■□□□ 1.13
CSGALNACT1-208ENST00000520003 ST20-MTHFSA0A0A6YYL1 179 aa22.1■■□□□ 1.13
CSGALNACT1-208ENST00000520003 AMPHP49418 695 aa22.1■■□□□ 1.13
CSGALNACT1-208ENST00000520003 NLGN2Q8NFZ4 835 aa22.1■■□□□ 1.13
CSGALNACT1-208ENST00000520003 RGPD2P0DJD1 1756 aa22.09■■□□□ 1.13
CSGALNACT1-208ENST00000520003 SENP3-EIF4A1A0A087X0R7 540 aa22.08■■□□□ 1.13
CSGALNACT1-208ENST00000520003 NBPF6Q5VWK0 638 aa22.08■■□□□ 1.13
CSGALNACT1-208ENST00000520003 KLHL34Q8N239 644 aa22.08■■□□□ 1.13
CSGALNACT1-208ENST00000520003 NBPF4Q96M43 638 aa22.08■■□□□ 1.13
CSGALNACT1-208ENST00000520003 CCNL1Q9UK58 526 aaPredicted RBP22.08■■□□□ 1.13
CSGALNACT1-208ENST00000520003 CGNL1Q0VF96 1302 aa22.07■■□□□ 1.12
CSGALNACT1-208ENST00000520003 SLC24A1O60721 1099 aa22.07■■□□□ 1.12
CSGALNACT1-208ENST00000520003 COL23A1Q86Y22 540 aaPredicted RBP22.06■■□□□ 1.12
CSGALNACT1-208ENST00000520003 USP47Q96K76 1375 aa22.06■■□□□ 1.12
CSGALNACT1-208ENST00000520003 FYB1O15117 783 aa22.05■■□□□ 1.12
CSGALNACT1-208ENST00000520003 RRS1Q15050 365 aaKnown RBP22.05■■□□□ 1.12
CSGALNACT1-208ENST00000520003 YBX3P16989 372 aaKnown RBP eCLIP22.04■■□□□ 1.12
CSGALNACT1-208ENST00000520003 GIGYF1O75420 1035 aaPredicted RBP22.02■■□□□ 1.12
CSGALNACT1-208ENST00000520003 PELP1Q8IZL8 1130 aaKnown RBP22.02■■□□□ 1.12
CSGALNACT1-208ENST00000520003 USHBP1Q8N6Y0 703 aa22.02■■□□□ 1.12
CSGALNACT1-208ENST00000520003 RAPGEF4Q8WZA2 1011 aa22.01■■□□□ 1.11
CSGALNACT1-208ENST00000520003 GGNBP2Q9H3C7 697 aa22.01■■□□□ 1.11
CSGALNACT1-208ENST00000520003 INSRP06213 1382 aa22■■□□□ 1.11
CSGALNACT1-208ENST00000520003 SMG6Q86US8 1419 aaKnown RBP22■■□□□ 1.11
CSGALNACT1-208ENST00000520003 GRIN3BO60391 1043 aa22■■□□□ 1.11
CSGALNACT1-208ENST00000520003 TRIM26Q12899 539 aaPredicted RBP22■■□□□ 1.11
CSGALNACT1-208ENST00000520003 PCDH11XQ9BZA7 1347 aa21.99■■□□□ 1.11
CSGALNACT1-208ENST00000520003 PCDH11YQ9BZA8 1340 aa21.99■■□□□ 1.11
CSGALNACT1-208ENST00000520003 KIF20BQ96Q89 1820 aa21.99■■□□□ 1.11
CSGALNACT1-208ENST00000520003 KIF24Q5T7B8 1368 aa21.99■■□□□ 1.11
CSGALNACT1-208ENST00000520003 C5P01031 1676 aa21.98■■□□□ 1.11
CSGALNACT1-208ENST00000520003 TATP17735 454 aaPredicted RBP21.98■■□□□ 1.11
CSGALNACT1-208ENST00000520003 HSP90AB2PQ58FF8 381 aa21.98■■□□□ 1.11
CSGALNACT1-208ENST00000520003 MSH5O43196 834 aa21.97■■□□□ 1.11
CSGALNACT1-208ENST00000520003 MSL1Q68DK7 614 aa21.97■■□□□ 1.11
CSGALNACT1-208ENST00000520003 FLT4P35916 1363 aa21.97■■□□□ 1.11
CSGALNACT1-208ENST00000520003 PALLDQ8WX93 1383 aa21.97■■□□□ 1.11
CSGALNACT1-208ENST00000520003 CYP27B1O15528 508 aa21.96■■□□□ 1.11
CSGALNACT1-208ENST00000520003 FLAD1Q8NFF5 587 aa21.96■■□□□ 1.11
CSGALNACT1-208ENST00000520003 CD2APQ9Y5K6 639 aa21.96■■□□□ 1.11
CSGALNACT1-208ENST00000520003 HMGB2P26583 209 aaKnown RBP21.95■■□□□ 1.1
CSGALNACT1-208ENST00000520003 TMF1P82094 1093 aa21.95■■□□□ 1.1
CSGALNACT1-208ENST00000520003 NCAPD2Q15021 1401 aa21.95■■□□□ 1.1
CSGALNACT1-208ENST00000520003 TAF1LQ8IZX4 1826 aa21.94■■□□□ 1.1
CSGALNACT1-208ENST00000520003 TOGARAM1Q9Y4F4 1720 aa21.93■■□□□ 1.1
CSGALNACT1-208ENST00000520003 AMIGO3Q86WK7 504 aa21.92■■□□□ 1.1
CSGALNACT1-208ENST00000520003 CEP350Q5VT06 3117 aa21.91■■□□□ 1.1
CSGALNACT1-208ENST00000520003 MPRIPQ6WCQ1 1025 aa21.91■■□□□ 1.1
CSGALNACT1-208ENST00000520003 C4BP0C0L5 1744 aa21.91■■□□□ 1.1
CSGALNACT1-208ENST00000520003 PKD1L3Q7Z443 1732 aa21.91■■□□□ 1.1
CSGALNACT1-208ENST00000520003 ATP10DQ9P241 1426 aa21.9■■□□□ 1.1
CSGALNACT1-208ENST00000520003 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
CSGALNACT1-208ENST00000520003 SMARCC1Q92922 1105 aaPredicted RBP21.9■■□□□ 1.1
CSGALNACT1-208ENST00000520003 ADCY9O60503 1353 aa21.89■■□□□ 1.1
CSGALNACT1-208ENST00000520003 CARD14Q9BXL6 1004 aa21.89■■□□□ 1.09
CSGALNACT1-208ENST00000520003 PIGBQ92521 554 aa21.88■■□□□ 1.09
CSGALNACT1-208ENST00000520003 EMILIN1Q9Y6C2 1016 aa21.88■■□□□ 1.09
CSGALNACT1-208ENST00000520003 ITGB4P16144 1822 aa21.87■■□□□ 1.09
CSGALNACT1-208ENST00000520003 UBR3Q6ZT12 1888 aa21.86■■□□□ 1.09
CSGALNACT1-208ENST00000520003 MAP2P11137 1827 aaKnown RBP21.86■■□□□ 1.09
CSGALNACT1-208ENST00000520003 CDCA8Q53HL2 280 aa21.86■■□□□ 1.09
CSGALNACT1-208ENST00000520003 AK7Q96M32 723 aa21.86■■□□□ 1.09
CSGALNACT1-208ENST00000520003 NSD3Q9BZ95 1437 aa21.86■■□□□ 1.09
CSGALNACT1-208ENST00000520003 ANKRD26Q9UPS8 1709 aa21.86■■□□□ 1.09
CSGALNACT1-208ENST00000520003 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.84■■□□□ 1.09
CSGALNACT1-208ENST00000520003 SSFA2P28290 1259 aa21.83■■□□□ 1.09
CSGALNACT1-208ENST00000520003 SMIM5Q71RC9 77 aa21.83■■□□□ 1.09
CSGALNACT1-208ENST00000520003 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.83■■□□□ 1.09
CSGALNACT1-208ENST00000520003 WASHC2AQ641Q2 1341 aa21.82■■□□□ 1.08
CSGALNACT1-208ENST00000520003 LOC102724428A0A0B4J2F2 783 aa21.82■■□□□ 1.08
CSGALNACT1-208ENST00000520003 SIK1P57059 783 aa21.82■■□□□ 1.08
CSGALNACT1-208ENST00000520003 LINC00116Q8NCU8 138 aa21.82■■□□□ 1.08
CSGALNACT1-208ENST00000520003 SPG7Q9UQ90 795 aa21.82■■□□□ 1.08
CSGALNACT1-208ENST00000520003 IGSF1Q8N6C5 1336 aa21.81■■□□□ 1.08
CSGALNACT1-208ENST00000520003 PHF14O94880 888 aa21.81■■□□□ 1.08
CSGALNACT1-208ENST00000520003 GPBP1L1Q9HC44 474 aaPredicted RBP21.81■■□□□ 1.08
CSGALNACT1-208ENST00000520003 TIMELESSQ9UNS1 1208 aa21.81■■□□□ 1.08
CSGALNACT1-208ENST00000520003 EYA1Q99502 592 aa21.8■■□□□ 1.08
CSGALNACT1-208ENST00000520003 ITPK1Q13572 414 aa21.79■■□□□ 1.08
CSGALNACT1-208ENST00000520003 IFFO2Q5TF58 517 aa21.79■■□□□ 1.08
CSGALNACT1-208ENST00000520003 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
CSGALNACT1-208ENST00000520003 CLSPNQ9HAW4 1339 aa21.78■■□□□ 1.08
CSGALNACT1-208ENST00000520003 PHKG2P15735 406 aa21.77■■□□□ 1.08
CSGALNACT1-208ENST00000520003 TMOD3Q9NYL9 352 aa21.77■■□□□ 1.08
CSGALNACT1-208ENST00000520003 PLEKHG2Q9H7P9 1386 aa21.76■■□□□ 1.07
CSGALNACT1-208ENST00000520003 CICQ96RK0 1608 aaPredicted RBP21.76■■□□□ 1.07
CSGALNACT1-208ENST00000520003 PPM1GO15355 546 aaPredicted RBP21.75■■□□□ 1.07
CSGALNACT1-208ENST00000520003 IFNL2Q8IZJ0 200 aa21.75■■□□□ 1.07
CSGALNACT1-208ENST00000520003 POLKQ9UBT6 870 aa21.75■■□□□ 1.07
CSGALNACT1-208ENST00000520003 KDRP35968 1356 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms