RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 Q6ZVU0 165 aa12.02□□□□□ -0.49
PTPN12-213ENST00000519553 MKRN1Q9UHC7 482 aaKnown RBP12.02□□□□□ -0.49
PTPN12-213ENST00000519553 MYCP01106 439 aaPredicted RBP12.01□□□□□ -0.49
PTPN12-213ENST00000519553 PBXIP1Q96AQ6 731 aa12.01□□□□□ -0.49
PTPN12-213ENST00000519553 NOD1Q9Y239 953 aa12.01□□□□□ -0.49
PTPN12-213ENST00000519553 MEIOBQ8N635 442 aa12□□□□□ -0.49
PTPN12-213ENST00000519553 KDF1Q8NAX2 398 aaPredicted RBP12□□□□□ -0.49
PTPN12-213ENST00000519553 SIRT1Q96EB6 747 aa12□□□□□ -0.49
PTPN12-213ENST00000519553 ATP5J2-PTCD1G3V325 749 aa11.99□□□□□ -0.49
PTPN12-213ENST00000519553 CAPN5O15484 640 aaPredicted RBP11.99□□□□□ -0.49
PTPN12-213ENST00000519553 SMCPP49901 116 aaPredicted RBP11.99□□□□□ -0.49
PTPN12-213ENST00000519553 CLDN10P78369 228 aa11.99□□□□□ -0.49
PTPN12-213ENST00000519553 CRIPAKQ8N1N5 446 aa11.99□□□□□ -0.49
PTPN12-213ENST00000519553 TRIM52Q96A61 297 aa11.99□□□□□ -0.49
PTPN12-213ENST00000519553 PCDHGA11Q9Y5H2 935 aa11.99□□□□□ -0.49
PTPN12-213ENST00000519553 ADH1AP07327 375 aa11.98□□□□□ -0.49
PTPN12-213ENST00000519553 GTF2IP78347 998 aa11.98□□□□□ -0.49
PTPN12-213ENST00000519553 CTC1Q2NKJ3 1217 aa11.98□□□□□ -0.49
PTPN12-213ENST00000519553 VRTNQ9H8Y1 702 aa11.98□□□□□ -0.49
PTPN12-213ENST00000519553 KIAA1024Q9UPX6 916 aa11.98□□□□□ -0.49
PTPN12-213ENST00000519553 CRTC2Q53ET0 693 aaPredicted RBP11.97□□□□□ -0.49
PTPN12-213ENST00000519553 CDCA8Q53HL2 280 aa11.97□□□□□ -0.49
PTPN12-213ENST00000519553 CYP2U1Q7Z449 544 aa11.96□□□□□ -0.49
PTPN12-213ENST00000519553 TRIM50Q86XT4 487 aa11.96□□□□□ -0.49
PTPN12-213ENST00000519553 OGFOD1Q8N543 542 aa11.96□□□□□ -0.49
PTPN12-213ENST00000519553 FAM196BA6NMK8 535 aa11.95□□□□□ -0.5
PTPN12-213ENST00000519553 AGBL1Q96MI9 1066 aa11.95□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L15C9J2P7 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L10C9JJH3 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L13C9JLJ4 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L12C9JPN9 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L11C9JVI0 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L21D6R901 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L18D6R9N7 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L22D6RA61 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L17D6RBQ6 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L19D6RCP7 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L20D6RJB6 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 ZBTB7BO15156 539 aaPredicted RBP11.94□□□□□ -0.5
PTPN12-213ENST00000519553 PPP1R15AO75807 674 aaPredicted RBP11.94□□□□□ -0.5
PTPN12-213ENST00000519553 DKK1O94907 266 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 STAU1O95793 577 aaKnown RBP11.94□□□□□ -0.5
PTPN12-213ENST00000519553 RASA1P20936 1047 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 USP17L24Q0WX57 530 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 PTK7Q13308 1070 aa11.94□□□□□ -0.5
PTPN12-213ENST00000519553 ST8SIA5O15466 376 aa11.93□□□□□ -0.5
PTPN12-213ENST00000519553 ATP1A2P50993 1020 aa11.93□□□□□ -0.5
PTPN12-213ENST00000519553 SCNN1DP51172 638 aa11.93□□□□□ -0.5
PTPN12-213ENST00000519553 ESF1Q9H501 851 aaKnown RBP11.93□□□□□ -0.5
PTPN12-213ENST00000519553 AAASQ9NRG9 546 aa11.93□□□□□ -0.5
PTPN12-213ENST00000519553 DNAAF2Q9NVR5 837 aaKnown RBP11.93□□□□□ -0.5
PTPN12-213ENST00000519553 LCE2BO14633 110 aa11.92□□□□□ -0.5
PTPN12-213ENST00000519553 AXIN1O15169 862 aa11.92□□□□□ -0.5
PTPN12-213ENST00000519553 ATG7O95352 703 aa11.92□□□□□ -0.5
PTPN12-213ENST00000519553 SIX5Q8N196 739 aa11.92□□□□□ -0.5
PTPN12-213ENST00000519553 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
PTPN12-213ENST00000519553 LARGE2Q8N3Y3 721 aa11.92□□□□□ -0.5
PTPN12-213ENST00000519553 ZNF594Q96JF6 807 aaPredicted RBP11.92□□□□□ -0.5
PTPN12-213ENST00000519553 GNRH1P01148 92 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 BMP1P13497 986 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 RELBQ01201 579 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 TRIM46Q7Z4K8 759 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 ARXQ96QS3 562 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 ETNK1Q9HBU6 452 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 ARHGEF10LQ9HCE6 1279 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 ZMIZ1Q9ULJ6 1067 aa11.91□□□□□ -0.5
PTPN12-213ENST00000519553 TMEM229AB2RXF0 380 aa11.9□□□□□ -0.5
PTPN12-213ENST00000519553 PTGIRP43119 386 aa11.9□□□□□ -0.5
PTPN12-213ENST00000519553 LARP1Q6PKG0 1096 aaKnown RBP11.9□□□□□ -0.5
PTPN12-213ENST00000519553 RAB6BQ9NRW1 208 aa11.9□□□□□ -0.5
PTPN12-213ENST00000519553 WASLO00401 505 aaPredicted RBP11.89□□□□□ -0.51
PTPN12-213ENST00000519553 PSME1Q06323 249 aa11.89□□□□□ -0.51
PTPN12-213ENST00000519553 CCDC102BQ68D86 513 aa11.89□□□□□ -0.51
PTPN12-213ENST00000519553 MRPL14Q6P1L8 145 aaKnown RBP11.89□□□□□ -0.51
PTPN12-213ENST00000519553 TPCN2Q8NHX9 752 aa11.89□□□□□ -0.51
PTPN12-213ENST00000519553 TSEN34Q9BSV6 310 aaKnown RBP11.89□□□□□ -0.51
PTPN12-213ENST00000519553 IL2RAP01589 272 aa11.88□□□□□ -0.51
PTPN12-213ENST00000519553 GDF10P55107 478 aa11.88□□□□□ -0.51
PTPN12-213ENST00000519553 ELOAQ14241 798 aaKnown RBP11.88□□□□□ -0.51
PTPN12-213ENST00000519553 ZNF395Q9H8N7 513 aaPredicted RBP11.88□□□□□ -0.51
PTPN12-213ENST00000519553 DACH1Q9UI36 760 aa11.88□□□□□ -0.51
PTPN12-213ENST00000519553 A0A1W2PRU2 124 aa11.87□□□□□ -0.51
PTPN12-213ENST00000519553 ANKMY2Q8IV38 441 aa11.87□□□□□ -0.51
PTPN12-213ENST00000519553 NOVA2Q9UNW9 492 aaKnown RBP11.87□□□□□ -0.51
PTPN12-213ENST00000519553 SPINT1O43278 529 aa11.86□□□□□ -0.51
PTPN12-213ENST00000519553 INHAP05111 366 aa11.86□□□□□ -0.51
PTPN12-213ENST00000519553 DPYDQ12882 1025 aa11.86□□□□□ -0.51
PTPN12-213ENST00000519553 CLN3Q13286 438 aa11.86□□□□□ -0.51
PTPN12-213ENST00000519553 Q6ZNB5 142 aa11.86□□□□□ -0.51
PTPN12-213ENST00000519553 HRH3Q9Y5N1 445 aa11.86□□□□□ -0.51
PTPN12-213ENST00000519553 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.85□□□□□ -0.51
PTPN12-213ENST00000519553 STK32AQ8WU08 396 aa11.85□□□□□ -0.51
PTPN12-213ENST00000519553 ATP13A2Q9NQ11 1180 aa11.85□□□□□ -0.51
PTPN12-213ENST00000519553 ZNF358Q9NW07 568 aa11.85□□□□□ -0.51
PTPN12-213ENST00000519553 C6orf118Q5T5N4 469 aa11.84□□□□□ -0.51
PTPN12-213ENST00000519553 XAGE2Q96GT9 111 aa11.84□□□□□ -0.51
PTPN12-213ENST00000519553 PURBQ96QR8 312 aaKnown RBP11.84□□□□□ -0.51
PTPN12-213ENST00000519553 SFI1A8K8P3 1242 aa11.83□□□□□ -0.52
PTPN12-213ENST00000519553 UPP2O95045 317 aa11.83□□□□□ -0.52
PTPN12-213ENST00000519553 BMP2P12643 396 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms