RNA–Protein interactions for RNA: ENST00000519533.1

CHRAC1-203, Transcript of chromatin accessibility complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CHRAC1, Length 1,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1-203ENST00000519533 NLRP2Q9NX02 1062 aa27.65■■■□□ 2.02
CHRAC1-203ENST00000519533 ZNF853P0CG23 659 aa27.65■■■□□ 2.02
CHRAC1-203ENST00000519533 EXOSC9Q06265 439 aaKnown RBP27.65■■■□□ 2.02
CHRAC1-203ENST00000519533 DCTN1Q14203 1278 aa27.65■■■□□ 2.02
CHRAC1-203ENST00000519533 COL16A1Q07092 1604 aaPredicted RBP27.64■■■□□ 2.02
CHRAC1-203ENST00000519533 PLEKHG2Q9H7P9 1386 aa27.64■■■□□ 2.02
CHRAC1-203ENST00000519533 MCM10Q7L590 875 aa27.63■■■□□ 2.01
CHRAC1-203ENST00000519533 LRRC37A3O60309 1634 aa27.62■■■□□ 2.01
CHRAC1-203ENST00000519533 RARSP54136 660 aaKnown RBP27.61■■■□□ 2.01
CHRAC1-203ENST00000519533 RAPGEF4Q8WZA2 1011 aa27.61■■■□□ 2.01
CHRAC1-203ENST00000519533 UBAP1LF5GYI3 381 aa27.6■■■□□ 2.01
CHRAC1-203ENST00000519533 ZNF428Q96B54 188 aa27.6■■■□□ 2.01
CHRAC1-203ENST00000519533 MBIPQ9NS73 344 aa27.6■■■□□ 2.01
CHRAC1-203ENST00000519533 PPP4R2Q9NY27 417 aa27.6■■■□□ 2.01
CHRAC1-203ENST00000519533 PIP4K2BP78356 416 aa27.59■■■□□ 2.01
CHRAC1-203ENST00000519533 COL5A2P05997 1499 aaPredicted RBP27.59■■■□□ 2.01
CHRAC1-203ENST00000519533 WDR17Q8IZU2 1322 aa27.58■■■□□ 2.01
CHRAC1-203ENST00000519533 COL14A1Q05707 1796 aaKnown RBP27.58■■■□□ 2.01
CHRAC1-203ENST00000519533 CRB1P82279 1406 aa27.58■■■□□ 2.01
CHRAC1-203ENST00000519533 PLIN1O60240 522 aa27.58■■■□□ 2.01
CHRAC1-203ENST00000519533 BCAR3O75815 825 aa27.58■■■□□ 2.01
CHRAC1-203ENST00000519533 TATP17735 454 aaPredicted RBP27.57■■■□□ 2
CHRAC1-203ENST00000519533 CHL1O00533 1208 aa27.56■■■□□ 2
CHRAC1-203ENST00000519533 AKAP4Q5JQC9 854 aa27.56■■■□□ 2
CHRAC1-203ENST00000519533 C1orf141Q5JVX7 400 aa27.56■■■□□ 2
CHRAC1-203ENST00000519533 VIRMAQ69YN4 1812 aaKnown RBP27.56■■■□□ 2
CHRAC1-203ENST00000519533 ZNF530Q6P9A1 599 aaPredicted RBP27.56■■■□□ 2
CHRAC1-203ENST00000519533 CANXP27824 592 aaKnown RBP27.56■■■□□ 2
CHRAC1-203ENST00000519533 PARP4Q9UKK3 1724 aaKnown RBP27.53■■■□□ 2
CHRAC1-203ENST00000519533 TOM1L2Q6ZVM7 507 aa27.53■■■□□ 2
CHRAC1-203ENST00000519533 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.53■■■□□ 24e-8■■■■■ 31
CHRAC1-203ENST00000519533 EVA1CP58658 441 aa27.52■■■□□ 2
CHRAC1-203ENST00000519533 ALDH1L2Q3SY69 923 aa27.52■■■□□ 2
CHRAC1-203ENST00000519533 BABAM1Q9NWV8 329 aa27.52■■■□□ 2
CHRAC1-203ENST00000519533 SPG7Q9UQ90 795 aa27.52■■■□□ 2
CHRAC1-203ENST00000519533 PKD1L3Q7Z443 1732 aa27.51■■□□□ 1.99
CHRAC1-203ENST00000519533 OVOS2A0A0G2JMS6 1433 aa27.51■■□□□ 1.99
CHRAC1-203ENST00000519533 CEMIPQ8WUJ3 1361 aa27.51■■□□□ 1.99
CHRAC1-203ENST00000519533 IL17REQ8NFR9 667 aa27.5■■□□□ 1.99
CHRAC1-203ENST00000519533 SMC4Q9NTJ3 1288 aa27.5■■□□□ 1.99
CHRAC1-203ENST00000519533 CERKQ8TCT0 537 aa27.49■■□□□ 1.99
CHRAC1-203ENST00000519533 TSPYL4Q9UJ04 414 aa27.49■■□□□ 1.99
CHRAC1-203ENST00000519533 MEGF6O75095 1541 aa27.49■■□□□ 1.99
CHRAC1-203ENST00000519533 PDE3AQ14432 1141 aa27.49■■□□□ 1.99
CHRAC1-203ENST00000519533 TWISTNBQ3B726 338 aaPredicted RBP27.49■■□□□ 1.99
CHRAC1-203ENST00000519533 FRAT1Q92837 279 aaPredicted RBP27.48■■□□□ 1.99
CHRAC1-203ENST00000519533 CARD10Q9BWT7 1032 aa27.48■■□□□ 1.99
CHRAC1-203ENST00000519533 TAF7Q15545 349 aaPredicted RBP27.47■■□□□ 1.99
CHRAC1-203ENST00000519533 BCL2L13Q9BXK5 485 aa27.47■■□□□ 1.99
CHRAC1-203ENST00000519533 STRN4Q9NRL3 753 aa27.47■■□□□ 1.99
CHRAC1-203ENST00000519533 VAMP4O75379 141 aa27.46■■□□□ 1.99
CHRAC1-203ENST00000519533 EXOC6Q8TAG9 804 aa27.46■■□□□ 1.99
CHRAC1-203ENST00000519533 SSH1Q8WYL5 1049 aa27.46■■□□□ 1.99
CHRAC1-203ENST00000519533 KIF16BQ96L93 1317 aa27.46■■□□□ 1.99
CHRAC1-203ENST00000519533 MS4A1P11836 297 aa27.46■■□□□ 1.99
CHRAC1-203ENST00000519533 BTG4Q9NY30 223 aa27.45■■□□□ 1.98
CHRAC1-203ENST00000519533 ADAMTS7Q9UKP4 1686 aa27.45■■□□□ 1.98
CHRAC1-203ENST00000519533 TEFQ10587 303 aa27.44■■□□□ 1.98
CHRAC1-203ENST00000519533 C20orf194Q5TEA3 1177 aa27.44■■□□□ 1.98
CHRAC1-203ENST00000519533 CRBNQ96SW2 442 aa27.44■■□□□ 1.98
CHRAC1-203ENST00000519533 ZKSCAN2Q63HK3 967 aa27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 PELP1Q8IZL8 1130 aaKnown RBP27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 TSPYL6Q8N831 410 aa27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 C8orf58Q8NAV2 365 aa27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 SCN11AQ9UI33 1791 aa27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 PLCH1Q4KWH8 1693 aa27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 BRPF1P55201 1214 aaPredicted RBP27.43■■□□□ 1.98
CHRAC1-203ENST00000519533 IPO8O15397 1037 aaKnown RBP27.42■■□□□ 1.98
CHRAC1-203ENST00000519533 RNMTO43148 476 aaKnown RBP27.42■■□□□ 1.98
CHRAC1-203ENST00000519533 IFNL2Q8IZJ0 200 aa27.42■■□□□ 1.98
CHRAC1-203ENST00000519533 ELL2O00472 640 aaPredicted RBP27.41■■□□□ 1.98
CHRAC1-203ENST00000519533 LARP1Q6PKG0 1096 aaKnown RBP27.41■■□□□ 1.98
CHRAC1-203ENST00000519533 MPRIPQ6WCQ1 1025 aa27.41■■□□□ 1.98
CHRAC1-203ENST00000519533 KDM3BQ7LBC6 1761 aa27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 CCDC136Q96JN2 1154 aa27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 LGR6Q9HBX8 967 aa27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 SOS1Q07889 1333 aaPredicted RBP27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 HSP90AB1P08238 724 aaKnown RBP27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 IL2RBP14784 551 aa27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 MIS18AQ9NYP9 233 aa27.4■■□□□ 1.98
CHRAC1-203ENST00000519533 SIPA1L3O60292 1781 aaPredicted RBP27.39■■□□□ 1.98
CHRAC1-203ENST00000519533 PHKG2P15735 406 aa27.39■■□□□ 1.97
CHRAC1-203ENST00000519533 JCADQ9P266 1359 aa27.38■■□□□ 1.97
CHRAC1-203ENST00000519533 NWD2Q9ULI1 1742 aa27.37■■□□□ 1.97
CHRAC1-203ENST00000519533 PCDH11XQ9BZA7 1347 aa27.37■■□□□ 1.97
CHRAC1-203ENST00000519533 PCDH11YQ9BZA8 1340 aa27.37■■□□□ 1.97
CHRAC1-203ENST00000519533 B4GALNT3Q6L9W6 998 aa27.36■■□□□ 1.97
CHRAC1-203ENST00000519533 FTSJ3Q8IY81 847 aaKnown RBP27.36■■□□□ 1.97
CHRAC1-203ENST00000519533 ADAMTS2O95450 1211 aa27.35■■□□□ 1.97
CHRAC1-203ENST00000519533 ATF7IPQ6VMQ6 1270 aa27.35■■□□□ 1.97
CHRAC1-203ENST00000519533 ZCRB1Q8TBF4 217 aaKnown RBP27.35■■□□□ 1.97
CHRAC1-203ENST00000519533 NOB1Q9ULX3 412 aaKnown RBP27.35■■□□□ 1.97
CHRAC1-203ENST00000519533 NRAPQ86VF7 1730 aa27.34■■□□□ 1.97
CHRAC1-203ENST00000519533 NUTM2BA6NNL0 878 aaPredicted RBP27.34■■□□□ 1.97
CHRAC1-203ENST00000519533 NUTM2EB1AL46 878 aaPredicted RBP27.34■■□□□ 1.97
CHRAC1-203ENST00000519533 NUTM2AQ8IVF1 878 aaPredicted RBP27.34■■□□□ 1.97
CHRAC1-203ENST00000519533 MRPL50Q8N5N7 158 aaKnown RBP27.34■■□□□ 1.97
CHRAC1-203ENST00000519533 CACNA1FO60840 1977 aa27.34■■□□□ 1.97
CHRAC1-203ENST00000519533 BTBD11A6QL63 1104 aa27.33■■□□□ 1.97
CHRAC1-203ENST00000519533 DZIP1LQ8IYY4 767 aaKnown RBP27.33■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms