RNA–Protein interactions for RNA: ENST00000519515.1

VPS37A-205, Transcript of VPS37A, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37A, Length 266 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37A-205ENST00000519515 ERVK-9P63128 1117 aa10.78□□□□□ -0.68
VPS37A-205ENST00000519515 CC2D2BQ6DHV5 1058 aa10.78□□□□□ -0.68
VPS37A-205ENST00000519515 PRICKLE2Q7Z3G6 844 aa10.78□□□□□ -0.68
VPS37A-205ENST00000519515 ZNF592Q92610 1267 aa10.78□□□□□ -0.68
VPS37A-205ENST00000519515 COL25A1Q9BXS0 654 aaPredicted RBP10.78□□□□□ -0.68
VPS37A-205ENST00000519515 CDC14CA4D256 554 aa10.77□□□□□ -0.69
VPS37A-205ENST00000519515 RNF144AP50876 292 aaPredicted RBP10.77□□□□□ -0.69
VPS37A-205ENST00000519515 SV2AQ7L0J3 742 aa10.77□□□□□ -0.69
VPS37A-205ENST00000519515 A0A1W2PRU2 124 aa10.76□□□□□ -0.69
VPS37A-205ENST00000519515 MEN1O00255 615 aa10.76□□□□□ -0.69
VPS37A-205ENST00000519515 PCDHB11Q9Y5F2 797 aa10.76□□□□□ -0.69
VPS37A-205ENST00000519515 RHOQP17081 205 aa10.74□□□□□ -0.69
VPS37A-205ENST00000519515 SCTRP47872 440 aa10.74□□□□□ -0.69
VPS37A-205ENST00000519515 RNFT1Q5M7Z0 435 aa10.74□□□□□ -0.69
VPS37A-205ENST00000519515 ESF1Q9H501 851 aaKnown RBP10.73□□□□□ -0.69
VPS37A-205ENST00000519515 TBC1D2BQ9UPU7 963 aa10.73□□□□□ -0.69
VPS37A-205ENST00000519515 CYP2U1Q7Z449 544 aa10.72□□□□□ -0.69
VPS37A-205ENST00000519515 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
VPS37A-205ENST00000519515 CEP126Q9P2H0 1117 aa10.72□□□□□ -0.69
VPS37A-205ENST00000519515 GPC1P35052 558 aa10.71□□□□□ -0.69
VPS37A-205ENST00000519515 OSBPL3Q9H4L5 887 aa10.71□□□□□ -0.69
VPS37A-205ENST00000519515 TRAK2O60296 914 aa10.7□□□□□ -0.7
VPS37A-205ENST00000519515 PRM3Q9NNZ6 103 aa10.7□□□□□ -0.7
VPS37A-205ENST00000519515 CUEDC1Q9NWM3 386 aaPredicted RBP10.7□□□□□ -0.7
VPS37A-205ENST00000519515 SLC27A3Q5K4L6 730 aa10.69□□□□□ -0.7
VPS37A-205ENST00000519515 POU4F2Q12837 409 aa10.68□□□□□ -0.7
VPS37A-205ENST00000519515 CLN3Q13286 438 aa10.68□□□□□ -0.7
VPS37A-205ENST00000519515 CDCA7Q9BWT1 371 aaPredicted RBP10.68□□□□□ -0.7
VPS37A-205ENST00000519515 ARHGEF10LQ9HCE6 1279 aa10.68□□□□□ -0.7
VPS37A-205ENST00000519515 CCDC85AQ96PX6 553 aaPredicted RBP10.67□□□□□ -0.7
VPS37A-205ENST00000519515 GRIP2Q9C0E4 1043 aa10.67□□□□□ -0.7
VPS37A-205ENST00000519515 PRKCSHP14314 528 aaPredicted RBP10.66□□□□□ -0.7
VPS37A-205ENST00000519515 EIF4G2P78344 907 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS37A-205ENST00000519515 IRF5Q13568 498 aa10.66□□□□□ -0.7
VPS37A-205ENST00000519515 TSGA10IPQ3SY00 556 aa10.65□□□□□ -0.7
VPS37A-205ENST00000519515 RIPOR1Q6ZS17 1223 aa10.65□□□□□ -0.7
VPS37A-205ENST00000519515 RAB6BQ9NRW1 208 aa10.65□□□□□ -0.7
VPS37A-205ENST00000519515 MYCP01106 439 aaPredicted RBP10.64□□□□□ -0.71
VPS37A-205ENST00000519515 ZNF385CQ66K41 422 aaPredicted RBP10.64□□□□□ -0.71
VPS37A-205ENST00000519515 WHAMMQ8TF30 809 aa10.64□□□□□ -0.71
VPS37A-205ENST00000519515 GAS2L1Q99501 681 aaPredicted RBP10.64□□□□□ -0.71
VPS37A-205ENST00000519515 DYRK1BQ9Y463 629 aa10.64□□□□□ -0.71
VPS37A-205ENST00000519515 GNRH1P01148 92 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 SLURP2P0DP57 97 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 DBN1Q16643 649 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 NBPF10Q6P3W6 841 aaKnown RBP10.63□□□□□ -0.71
VPS37A-205ENST00000519515 TRIM22Q8IYM9 498 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 SVOPQ8N4V2 548 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 NBPF15Q8N660 670 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 ZNF837Q96EG3 531 aaPredicted RBP10.63□□□□□ -0.71
VPS37A-205ENST00000519515 GDPD2Q9HCC8 539 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 ADAMTS8Q9UP79 889 aa10.63□□□□□ -0.71
VPS37A-205ENST00000519515 VAC14Q08AM6 782 aa10.62□□□□□ -0.71
VPS37A-205ENST00000519515 PHTF2Q8N3S3 785 aa10.62□□□□□ -0.71
VPS37A-205ENST00000519515 CNKSR1Q969H4 720 aa10.62□□□□□ -0.71
VPS37A-205ENST00000519515 SPATA31C2B4DYI2 1134 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 IL2RAP01589 272 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 ABL2P42684 1182 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 CENPCQ03188 943 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 GAS6Q14393 721 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 SLFNL1Q499Z3 407 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 GMCL1Q96IK5 515 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 ESYT1Q9BSJ8 1104 aa10.61□□□□□ -0.71
VPS37A-205ENST00000519515 GPR25O00155 361 aa10.6□□□□□ -0.71
VPS37A-205ENST00000519515 ADAMTS2O95450 1211 aa10.6□□□□□ -0.71
VPS37A-205ENST00000519515 TIMMDC1Q9NPL8 285 aa10.6□□□□□ -0.71
VPS37A-205ENST00000519515 WASLO00401 505 aaPredicted RBP10.59□□□□□ -0.71
VPS37A-205ENST00000519515 SRSF11Q05519 484 aaKnown RBP10.59□□□□□ -0.71
VPS37A-205ENST00000519515 USP4Q13107 963 aa10.59□□□□□ -0.71
VPS37A-205ENST00000519515 WDR44Q5JSH3 913 aa10.59□□□□□ -0.71
VPS37A-205ENST00000519515 FOXR1Q6PIV2 292 aa10.59□□□□□ -0.71
VPS37A-205ENST00000519515 TAS1R3Q7RTX0 852 aa10.59□□□□□ -0.71
VPS37A-205ENST00000519515 RNF135Q8IUD6 432 aa10.59□□□□□ -0.71
VPS37A-205ENST00000519515 DOLKQ9UPQ8 538 aa10.59□□□□□ -0.71
VPS37A-205ENST00000519515 H7C1W4 665 aa10.58□□□□□ -0.72
VPS37A-205ENST00000519515 KCNMA1Q12791 1236 aa10.58□□□□□ -0.72
VPS37A-205ENST00000519515 XAGE2Q96GT9 111 aa10.58□□□□□ -0.72
VPS37A-205ENST00000519515 ARHGEF15O94989 841 aa10.57□□□□□ -0.72
VPS37A-205ENST00000519515 GTPBP3Q969Y2 492 aaKnown RBP10.57□□□□□ -0.72
VPS37A-205ENST00000519515 OXLD1Q5BKU9 147 aa10.56□□□□□ -0.72
VPS37A-205ENST00000519515 LYPD4Q6UWN0 246 aa10.56□□□□□ -0.72
VPS37A-205ENST00000519515 ZSCAN10Q96SZ4 725 aaPredicted RBP10.56□□□□□ -0.72
VPS37A-205ENST00000519515 HRH3Q9Y5N1 445 aa10.56□□□□□ -0.72
VPS37A-205ENST00000519515 F11P03951 625 aa10.55□□□□□ -0.72
VPS37A-205ENST00000519515 PHKA2P46019 1235 aa10.55□□□□□ -0.72
VPS37A-205ENST00000519515 GSK3AP49840 483 aa10.55□□□□□ -0.72
VPS37A-205ENST00000519515 WASHC4Q2M389 1173 aa10.55□□□□□ -0.72
VPS37A-205ENST00000519515 ESCO1Q5FWF5 840 aa10.55□□□□□ -0.72
VPS37A-205ENST00000519515 MBIPQ9NS73 344 aa10.55□□□□□ -0.72
VPS37A-205ENST00000519515 STAU1O95793 577 aaKnown RBP10.54□□□□□ -0.72
VPS37A-205ENST00000519515 MCM6Q14566 821 aa10.54□□□□□ -0.72
VPS37A-205ENST00000519515 CHIC2Q9UKJ5 165 aa10.54□□□□□ -0.72
VPS37A-205ENST00000519515 GTF2E1P29083 439 aaPredicted RBP10.53□□□□□ -0.72
VPS37A-205ENST00000519515 SEMA3FQ13275 785 aa10.53□□□□□ -0.72
VPS37A-205ENST00000519515 TMEM214Q6NUQ4 689 aaKnown RBP10.53□□□□□ -0.72
VPS37A-205ENST00000519515 TRERF1Q96PN7 1200 aa10.53□□□□□ -0.72
VPS37A-205ENST00000519515 FHDC1Q9C0D6 1143 aaPredicted RBP10.53□□□□□ -0.72
VPS37A-205ENST00000519515 NUCKS1Q9H1E3 243 aaKnown RBP10.53□□□□□ -0.72
VPS37A-205ENST00000519515 CELA2BP08218 269 aaPredicted RBP10.52□□□□□ -0.73
VPS37A-205ENST00000519515 SIRT1Q96EB6 747 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms