RNA–Protein interactions for RNA: ENST00000519141.5

SPIDR-209, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,699 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-209ENST00000519141 ERBB3P21860 1342 aa16.09■□□□□ 0.17
SPIDR-209ENST00000519141 FANCIQ9NVI1 1328 aa16.09■□□□□ 0.17
SPIDR-209ENST00000519141 ERICH6BQ5W0A0 696 aa16.08■□□□□ 0.16
SPIDR-209ENST00000519141 MTHFSDQ2M296 383 aaKnown RBP16.07■□□□□ 0.16
SPIDR-209ENST00000519141 TSR2Q969E8 191 aaKnown RBP16.07■□□□□ 0.16
SPIDR-209ENST00000519141 NGLY1Q96IV0 654 aa16.07■□□□□ 0.16
SPIDR-209ENST00000519141 THUMPD2Q9BTF0 503 aaKnown RBP16.07■□□□□ 0.16
SPIDR-209ENST00000519141 CHRNA2Q15822 529 aa16.06■□□□□ 0.16
SPIDR-209ENST00000519141 PRDM11Q9NQV5 511 aa16.06■□□□□ 0.16
SPIDR-209ENST00000519141 FAM83GA6ND36 823 aa16.05■□□□□ 0.16
SPIDR-209ENST00000519141 GNAI1P63096 354 aa16.05■□□□□ 0.16
SPIDR-209ENST00000519141 IFT57Q9NWB7 429 aa16.05■□□□□ 0.16
SPIDR-209ENST00000519141 RXRBP28702 533 aa16.05■□□□□ 0.16
SPIDR-209ENST00000519141 RTF1Q92541 710 aaKnown RBP16.05■□□□□ 0.16
SPIDR-209ENST00000519141 LRRC37A3O60309 1634 aa16.04■□□□□ 0.16
SPIDR-209ENST00000519141 CT47B1P0C2W7 299 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-209ENST00000519141 DCTN1Q14203 1278 aa16.04■□□□□ 0.16
SPIDR-209ENST00000519141 FNBP4Q8N3X1 1017 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-209ENST00000519141 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.04■□□□□ 0.16
SPIDR-209ENST00000519141 QTRT2Q9H974 415 aaKnown RBP16.04■□□□□ 0.16
SPIDR-209ENST00000519141 LAS1LQ9Y4W2 734 aaKnown RBP16.04■□□□□ 0.16
SPIDR-209ENST00000519141 CSB-PGBD3P0DP91 1061 aa16.03■□□□□ 0.16
SPIDR-209ENST00000519141 MAP3K5Q99683 1374 aa16.03■□□□□ 0.16
SPIDR-209ENST00000519141 HTATSF1O43719 755 aaKnown RBP16.02■□□□□ 0.16
SPIDR-209ENST00000519141 EXOSC9Q06265 439 aaKnown RBP16.02■□□□□ 0.16
SPIDR-209ENST00000519141 MCM10Q7L590 875 aa16.02■□□□□ 0.16
SPIDR-209ENST00000519141 CFAP44Q96MT7 982 aa16.02■□□□□ 0.16
SPIDR-209ENST00000519141 NLRP2Q9NX02 1062 aa16.02■□□□□ 0.16
SPIDR-209ENST00000519141 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.15
SPIDR-209ENST00000519141 ZNF853P0CG23 659 aa16.02■□□□□ 0.15
SPIDR-209ENST00000519141 USP21Q9UK80 565 aa16.02■□□□□ 0.15
SPIDR-209ENST00000519141 EP400Q96L91 3159 aa16.01■□□□□ 0.15
SPIDR-209ENST00000519141 PLEKHO1Q53GL0 409 aaPredicted RBP16.01■□□□□ 0.15
SPIDR-209ENST00000519141 COL5A2P05997 1499 aaPredicted RBP16■□□□□ 0.15
SPIDR-209ENST00000519141 AMOTQ4VCS5 1084 aa16■□□□□ 0.15
SPIDR-209ENST00000519141 MBIPQ9NS73 344 aa16■□□□□ 0.15
SPIDR-209ENST00000519141 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
SPIDR-209ENST00000519141 PLIN1O60240 522 aa15.99■□□□□ 0.15
SPIDR-209ENST00000519141 RARSP54136 660 aaKnown RBP15.99■□□□□ 0.15
SPIDR-209ENST00000519141 RBM6P78332 1123 aaKnown RBP15.99■□□□□ 0.15
SPIDR-209ENST00000519141 CRB1P82279 1406 aa15.99■□□□□ 0.15
SPIDR-209ENST00000519141 PLEKHG2Q9H7P9 1386 aa15.99■□□□□ 0.15
SPIDR-209ENST00000519141 BCAR3O75815 825 aa15.99■□□□□ 0.15
SPIDR-209ENST00000519141 RAPGEF4Q8WZA2 1011 aa15.99■□□□□ 0.15
SPIDR-209ENST00000519141 WDR17Q8IZU2 1322 aa15.98■□□□□ 0.15
SPIDR-209ENST00000519141 VIRMAQ69YN4 1812 aaKnown RBP15.98■□□□□ 0.15
SPIDR-209ENST00000519141 ZNF530Q6P9A1 599 aaPredicted RBP15.98■□□□□ 0.15
SPIDR-209ENST00000519141 PPP4R2Q9NY27 417 aa15.98■□□□□ 0.15
SPIDR-209ENST00000519141 TRPC5Q9UL62 973 aaPredicted RBP15.98■□□□□ 0.15
SPIDR-209ENST00000519141 BCL9LQ86UU0 1499 aa15.98■□□□□ 0.15
SPIDR-209ENST00000519141 PARP4Q9UKK3 1724 aaKnown RBP15.97■□□□□ 0.15
SPIDR-209ENST00000519141 TATP17735 454 aaPredicted RBP15.96■□□□□ 0.15
SPIDR-209ENST00000519141 CANXP27824 592 aaKnown RBP15.96■□□□□ 0.15
SPIDR-209ENST00000519141 PKD1L3Q7Z443 1732 aa15.96■□□□□ 0.15
SPIDR-209ENST00000519141 MEGF6O75095 1541 aa15.96■□□□□ 0.15
SPIDR-209ENST00000519141 CHL1O00533 1208 aa15.95■□□□□ 0.14
SPIDR-209ENST00000519141 AKAP4Q5JQC9 854 aa15.95■□□□□ 0.14
SPIDR-209ENST00000519141 C1orf141Q5JVX7 400 aa15.95■□□□□ 0.14
SPIDR-209ENST00000519141 ATRNO75882 1429 aa15.95■□□□□ 0.14
SPIDR-209ENST00000519141 TOM1L2Q6ZVM7 507 aa15.95■□□□□ 0.14
SPIDR-209ENST00000519141 ZNF428Q96B54 188 aa15.95■□□□□ 0.14
SPIDR-209ENST00000519141 SLIT2O94813 1529 aa15.94■□□□□ 0.14
SPIDR-209ENST00000519141 IL17REQ8NFR9 667 aa15.94■□□□□ 0.14
SPIDR-209ENST00000519141 BCL2L13Q9BXK5 485 aa15.94■□□□□ 0.14
SPIDR-209ENST00000519141 SMC4Q9NTJ3 1288 aa15.94■□□□□ 0.14
SPIDR-209ENST00000519141 OVOS2A0A0G2JMS6 1433 aa15.94■□□□□ 0.14
SPIDR-209ENST00000519141 RGS12O14924 1447 aa15.94■□□□□ 0.14
SPIDR-209ENST00000519141 TSPYL4Q9UJ04 414 aa15.93■□□□□ 0.14
SPIDR-209ENST00000519141 CEMIPQ8WUJ3 1361 aa15.93■□□□□ 0.14
SPIDR-209ENST00000519141 PLCH1Q4KWH8 1693 aa15.93■□□□□ 0.14
SPIDR-209ENST00000519141 EVA1CP58658 441 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 ALDH1L2Q3SY69 923 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 UNC5CLQ8IV45 518 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 EXOC6Q8TAG9 804 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 FRAT1Q92837 279 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-209ENST00000519141 STRN4Q9NRL3 753 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.141e-6■■■■□ 21.2
SPIDR-209ENST00000519141 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 ADAMTS7Q9UKP4 1686 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 TWISTNBQ3B726 338 aaPredicted RBP15.92■□□□□ 0.14
SPIDR-209ENST00000519141 C20orf194Q5TEA3 1177 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 SSH1Q8WYL5 1049 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 CRBNQ96SW2 442 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 CARD10Q9BWT7 1032 aa15.92■□□□□ 0.14
SPIDR-209ENST00000519141 TSPYL6Q8N831 410 aa15.91■□□□□ 0.14
SPIDR-209ENST00000519141 GJD4Q96KN9 370 aaPredicted RBP15.91■□□□□ 0.14
SPIDR-209ENST00000519141 BABAM1Q9NWV8 329 aa15.91■□□□□ 0.14
SPIDR-209ENST00000519141 BTG4Q9NY30 223 aa15.91■□□□□ 0.14
SPIDR-209ENST00000519141 SCN11AQ9UI33 1791 aa15.91■□□□□ 0.14
SPIDR-209ENST00000519141 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.91■□□□□ 0.14
SPIDR-209ENST00000519141 KIF16BQ96L93 1317 aa15.9■□□□□ 0.14
SPIDR-209ENST00000519141 VAMP4O75379 141 aa15.9■□□□□ 0.14
SPIDR-209ENST00000519141 PDE3AQ14432 1141 aa15.9■□□□□ 0.14
SPIDR-209ENST00000519141 TAF7Q15545 349 aaPredicted RBP15.9■□□□□ 0.14
SPIDR-209ENST00000519141 C8orf58Q8NAV2 365 aa15.9■□□□□ 0.14
SPIDR-209ENST00000519141 UPF1Q92900 1129 aaKnown RBP eCLIP15.9■□□□□ 0.14
SPIDR-209ENST00000519141 KDM3BQ7LBC6 1761 aa15.9■□□□□ 0.14
SPIDR-209ENST00000519141 ELL2O00472 640 aaPredicted RBP15.89■□□□□ 0.13
SPIDR-209ENST00000519141 TEFQ10587 303 aa15.89■□□□□ 0.13
SPIDR-209ENST00000519141 LARP1Q6PKG0 1096 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms