RNA–Protein interactions for RNA: ENST00000519126.1

TMPRSS4-206, Transcript of transmembrane serine protease 4, humanhuman

TSL 1 (best)

Gene TMPRSS4, Length 847 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-206ENST00000519126 ERBB3P21860 1342 aa16.51■□□□□ 0.23
TMPRSS4-206ENST00000519126 ZNF692Q9BU19 519 aaPredicted RBP16.51■□□□□ 0.23
TMPRSS4-206ENST00000519126 TTC21AQ8NDW8 1320 aa16.5■□□□□ 0.23
TMPRSS4-206ENST00000519126 APLP1P51693 650 aa16.5■□□□□ 0.23
TMPRSS4-206ENST00000519126 COL23A1Q86Y22 540 aaPredicted RBP16.5■□□□□ 0.23
TMPRSS4-206ENST00000519126 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
TMPRSS4-206ENST00000519126 LY75O60449 1722 aa16.5■□□□□ 0.23
TMPRSS4-206ENST00000519126 KIF3CO14782 793 aa16.49■□□□□ 0.23
TMPRSS4-206ENST00000519126 MSL1Q68DK7 614 aa16.49■□□□□ 0.23
TMPRSS4-206ENST00000519126 DDX54Q8TDD1 881 aaKnown RBP16.49■□□□□ 0.23
TMPRSS4-206ENST00000519126 SYTL4Q96C24 671 aaPredicted RBP16.49■□□□□ 0.23
TMPRSS4-206ENST00000519126 NEUROD1Q13562 356 aa16.48■□□□□ 0.23
TMPRSS4-206ENST00000519126 L3MBTL2Q969R5 705 aa16.48■□□□□ 0.23
TMPRSS4-206ENST00000519126 SIN3AQ96ST3 1273 aa16.48■□□□□ 0.23
TMPRSS4-206ENST00000519126 LTN1O94822 1766 aa16.47■□□□□ 0.23
TMPRSS4-206ENST00000519126 TRIM26Q12899 539 aaPredicted RBP16.47■□□□□ 0.23
TMPRSS4-206ENST00000519126 DNAJC5GQ8N7S2 189 aa16.47■□□□□ 0.23
TMPRSS4-206ENST00000519126 PRIM1P49642 420 aaKnown RBP16.46■□□□□ 0.23
TMPRSS4-206ENST00000519126 ANKRD24Q8TF21 1146 aa16.46■□□□□ 0.23
TMPRSS4-206ENST00000519126 CCNL1Q9UK58 526 aaPredicted RBP16.46■□□□□ 0.23
TMPRSS4-206ENST00000519126 EVC2Q86UK5 1308 aa16.45■□□□□ 0.22
TMPRSS4-206ENST00000519126 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
TMPRSS4-206ENST00000519126 ANKRD36BQ8N2N9 1353 aa16.44■□□□□ 0.22
TMPRSS4-206ENST00000519126 KTN1Q86UP2 1357 aaKnown RBP16.43■□□□□ 0.22
TMPRSS4-206ENST00000519126 SLC4A2P04920 1241 aa16.43■□□□□ 0.22
TMPRSS4-206ENST00000519126 COL13A1Q5TAT6 717 aaPredicted RBP16.43■□□□□ 0.22
TMPRSS4-206ENST00000519126 WWC3Q9ULE0 1092 aa16.42■□□□□ 0.22
TMPRSS4-206ENST00000519126 NSD2O96028 1365 aa16.41■□□□□ 0.22
TMPRSS4-206ENST00000519126 TOMM70O94826 608 aa16.41■□□□□ 0.22
TMPRSS4-206ENST00000519126 IGSF1Q8N6C5 1336 aa16.41■□□□□ 0.22
TMPRSS4-206ENST00000519126 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.4■□□□□ 0.22
TMPRSS4-206ENST00000519126 USP31Q70CQ4 1352 aa16.39■□□□□ 0.21
TMPRSS4-206ENST00000519126 MON2Q7Z3U7 1717 aa16.39■□□□□ 0.21
TMPRSS4-206ENST00000519126 C5P01031 1676 aa16.39■□□□□ 0.21
TMPRSS4-206ENST00000519126 USP54Q70EL1 1684 aa16.39■□□□□ 0.21
TMPRSS4-206ENST00000519126 WDR90Q96KV7 1748 aa16.39■□□□□ 0.21
TMPRSS4-206ENST00000519126 USP47Q96K76 1375 aa16.38■□□□□ 0.21
TMPRSS4-206ENST00000519126 FLAD1Q8NFF5 587 aa16.38■□□□□ 0.21
TMPRSS4-206ENST00000519126 NME9Q86XW9 330 aa16.37■□□□□ 0.21
TMPRSS4-206ENST00000519126 ROCK2O75116 1388 aaKnown RBP16.37■□□□□ 0.21
TMPRSS4-206ENST00000519126 FAM208AQ9UK61 1670 aaKnown RBP16.37■□□□□ 0.21
TMPRSS4-206ENST00000519126 TAF1LQ8IZX4 1826 aa16.36■□□□□ 0.21
TMPRSS4-206ENST00000519126 PRELPP51888 382 aa16.36■□□□□ 0.21
TMPRSS4-206ENST00000519126 TNS4Q8IZW8 715 aa16.36■□□□□ 0.21
TMPRSS4-206ENST00000519126 LTV1Q96GA3 475 aaPredicted RBP16.36■□□□□ 0.21
TMPRSS4-206ENST00000519126 ZCRB1Q8TBF4 217 aaKnown RBP16.35■□□□□ 0.21
TMPRSS4-206ENST00000519126 KLRG1Q96E93 195 aa16.35■□□□□ 0.21
TMPRSS4-206ENST00000519126 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
TMPRSS4-206ENST00000519126 HMGB2P26583 209 aaKnown RBP16.34■□□□□ 0.21
TMPRSS4-206ENST00000519126 JMYQ8N9B5 988 aa16.34■□□□□ 0.21
TMPRSS4-206ENST00000519126 TONSLQ96HA7 1378 aa16.34■□□□□ 0.21
TMPRSS4-206ENST00000519126 HTRA3P83110 453 aa16.33■□□□□ 0.2
TMPRSS4-206ENST00000519126 CHRDL2Q6WN34 429 aa16.33■□□□□ 0.2
TMPRSS4-206ENST00000519126 IP6K1Q92551 441 aa16.33■□□□□ 0.2
TMPRSS4-206ENST00000519126 CICQ96RK0 1608 aaPredicted RBP16.33■□□□□ 0.2
TMPRSS4-206ENST00000519126 RGPD2P0DJD1 1756 aa16.32■□□□□ 0.2
TMPRSS4-206ENST00000519126 NMRK2Q9NPI5 230 aa16.32■□□□□ 0.2
TMPRSS4-206ENST00000519126 SBNO2Q9Y2G9 1366 aa16.31■□□□□ 0.2
TMPRSS4-206ENST00000519126 RBM46Q8TBY0 533 aaKnown RBP16.3■□□□□ 0.2
TMPRSS4-206ENST00000519126 C4BP0C0L5 1744 aa16.3■□□□□ 0.2
TMPRSS4-206ENST00000519126 UBR3Q6ZT12 1888 aa16.29■□□□□ 0.2
TMPRSS4-206ENST00000519126 AK7Q96M32 723 aa16.29■□□□□ 0.2
TMPRSS4-206ENST00000519126 MEGF6O75095 1541 aa16.29■□□□□ 0.2
TMPRSS4-206ENST00000519126 TOGARAM1Q9Y4F4 1720 aa16.28■□□□□ 0.2
TMPRSS4-206ENST00000519126 PHF14O94880 888 aa16.28■□□□□ 0.2
TMPRSS4-206ENST00000519126 AMIGO3Q86WK7 504 aa16.28■□□□□ 0.2
TMPRSS4-206ENST00000519126 C16orf71Q8IYS4 520 aaPredicted RBP16.28■□□□□ 0.2
TMPRSS4-206ENST00000519126 PALLDQ8WX93 1383 aa16.27■□□□□ 0.2
TMPRSS4-206ENST00000519126 SMIM5Q71RC9 77 aa16.27■□□□□ 0.2
TMPRSS4-206ENST00000519126 CARD11Q9BXL7 1154 aa16.27■□□□□ 0.2
TMPRSS4-206ENST00000519126 CD163L1Q9NR16 1453 aa16.27■□□□□ 0.19
TMPRSS4-206ENST00000519126 N4BP2Q86UW6 1770 aaPredicted RBP16.26■□□□□ 0.19
TMPRSS4-206ENST00000519126 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.26■□□□□ 0.19
TMPRSS4-206ENST00000519126 HDGFL2Q7Z4V5 671 aaPredicted RBP16.26■□□□□ 0.19
TMPRSS4-206ENST00000519126 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
TMPRSS4-206ENST00000519126 BCS1LQ9Y276 419 aa16.26■□□□□ 0.19
TMPRSS4-206ENST00000519126 FSTL1Q12841 308 aa16.25■□□□□ 0.19
TMPRSS4-206ENST00000519126 MPRIPQ6WCQ1 1025 aa16.25■□□□□ 0.19
TMPRSS4-206ENST00000519126 ARHGAP27Q6ZUM4 889 aa16.25■□□□□ 0.19
TMPRSS4-206ENST00000519126 PCGF6Q9BYE7 350 aa16.25■□□□□ 0.19
TMPRSS4-206ENST00000519126 NSD3Q9BZ95 1437 aa16.25■□□□□ 0.19
TMPRSS4-206ENST00000519126 HOXC9P31274 260 aa16.24■□□□□ 0.19
TMPRSS4-206ENST00000519126 EDC4Q6P2E9 1401 aaKnown RBP16.24■□□□□ 0.19
TMPRSS4-206ENST00000519126 KIF13BQ9NQT8 1826 aa16.24■□□□□ 0.19
TMPRSS4-206ENST00000519126 KIAA1551Q9HCM1 1747 aa16.23■□□□□ 0.19
TMPRSS4-206ENST00000519126 AMPHP49418 695 aa16.23■□□□□ 0.19
TMPRSS4-206ENST00000519126 ITGB4P16144 1822 aa16.23■□□□□ 0.19
TMPRSS4-206ENST00000519126 PXDNLA1KZ92 1463 aa16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 CGNL1Q0VF96 1302 aa16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 MAP3K19Q56UN5 1328 aa16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 SSFA2P28290 1259 aa16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 TGFB2P61812 414 aa16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 SMARCC1Q92922 1105 aaPredicted RBP16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 SLC12A5Q9H2X9 1139 aa16.22■□□□□ 0.19
TMPRSS4-206ENST00000519126 A0A0G2JLW4 131 aa16.21■□□□□ 0.19
TMPRSS4-206ENST00000519126 RAPGEF4Q8WZA2 1011 aa16.21■□□□□ 0.19
TMPRSS4-206ENST00000519126 MMP10P09238 476 aa16.2■□□□□ 0.18
TMPRSS4-206ENST00000519126 FBLN1P23142 703 aa16.2■□□□□ 0.18
TMPRSS4-206ENST00000519126 NBPF6Q5VWK0 638 aa16.2■□□□□ 0.18
TMPRSS4-206ENST00000519126 C9orf131Q5VYM1 1079 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms