RNA–Protein interactions for RNA: ENST00000519115.5

SDCBP-206, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 812 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-206ENST00000519115 TNS2Q63HR2 1409 aa10.29□□□□□ -0.76
SDCBP-206ENST00000519115 NPC1L1Q9UHC9 1359 aa10.28□□□□□ -0.76
SDCBP-206ENST00000519115 DDB1Q16531 1140 aa10.28□□□□□ -0.76
SDCBP-206ENST00000519115 MEGF6O75095 1541 aa10.28□□□□□ -0.76
SDCBP-206ENST00000519115 IL2RBP14784 551 aa10.27□□□□□ -0.77
SDCBP-206ENST00000519115 RALBP1Q15311 655 aa10.27□□□□□ -0.77
SDCBP-206ENST00000519115 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
SDCBP-206ENST00000519115 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
SDCBP-206ENST00000519115 CDCA7Q9BWT1 371 aaPredicted RBP10.27□□□□□ -0.77
SDCBP-206ENST00000519115 OVOS2A0A0G2JMS6 1433 aa10.26□□□□□ -0.77
SDCBP-206ENST00000519115 MIER1Q8N108 512 aa10.26□□□□□ -0.77
SDCBP-206ENST00000519115 PKD1L3Q7Z443 1732 aa10.25□□□□□ -0.77
SDCBP-206ENST00000519115 TRIM37O94972 964 aa10.25□□□□□ -0.77
SDCBP-206ENST00000519115 FAM196AQ6ZSG2 479 aa10.25□□□□□ -0.77
SDCBP-206ENST00000519115 MARCH10Q8NA82 808 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-206ENST00000519115 PRKRIP1Q9H875 184 aaPredicted RBP10.25□□□□□ -0.77
SDCBP-206ENST00000519115 DOT1LQ8TEK3 1739 aa10.24□□□□□ -0.77
SDCBP-206ENST00000519115 EXOC5O00471 708 aa10.24□□□□□ -0.77
SDCBP-206ENST00000519115 SF3B2Q13435 895 aaKnown RBP10.24□□□□□ -0.77
SDCBP-206ENST00000519115 EIF4A2Q14240 407 aaKnown RBP10.24□□□□□ -0.77
SDCBP-206ENST00000519115 DEFB132Q7Z7B7 95 aa10.24□□□□□ -0.77
SDCBP-206ENST00000519115 NHSQ6T4R5 1651 aa10.24□□□□□ -0.77
SDCBP-206ENST00000519115 NCAPD2Q15021 1401 aa10.24□□□□□ -0.77
SDCBP-206ENST00000519115 EYA1Q99502 592 aa10.23□□□□□ -0.77
SDCBP-206ENST00000519115 BTAF1O14981 1849 aa10.22□□□□□ -0.77
SDCBP-206ENST00000519115 MTHFSP49914 203 aa10.22□□□□□ -0.77
SDCBP-206ENST00000519115 CCDC125Q86Z20 511 aa10.22□□□□□ -0.77
SDCBP-206ENST00000519115 RAPGEF4Q8WZA2 1011 aa10.22□□□□□ -0.77
SDCBP-206ENST00000519115 SRCAPQ6ZRS2 3230 aa10.21□□□□□ -0.77
SDCBP-206ENST00000519115 MYCNP04198 464 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-206ENST00000519115 TATP17735 454 aaPredicted RBP10.21□□□□□ -0.77
SDCBP-206ENST00000519115 BAG6P46379 1132 aa10.21□□□□□ -0.77
SDCBP-206ENST00000519115 PTF1AQ7RTS3 328 aa10.21□□□□□ -0.77
SDCBP-206ENST00000519115 DDX54Q8TDD1 881 aaKnown RBP10.21□□□□□ -0.77
SDCBP-206ENST00000519115 COL3A1P02461 1466 aaPredicted RBP10.21□□□□□ -0.78
SDCBP-206ENST00000519115 RREB1Q92766 1687 aa10.21□□□□□ -0.78
SDCBP-206ENST00000519115 TOGARAM1Q9Y4F4 1720 aa10.21□□□□□ -0.78
SDCBP-206ENST00000519115 ITGB4P16144 1822 aa10.2□□□□□ -0.78
SDCBP-206ENST00000519115 EN1Q05925 392 aaPredicted RBP10.2□□□□□ -0.78
SDCBP-206ENST00000519115 NUP188Q5SRE5 1749 aa10.2□□□□□ -0.78
SDCBP-206ENST00000519115 IGSF1Q8N6C5 1336 aa10.2□□□□□ -0.78
SDCBP-206ENST00000519115 ZCRB1Q8TBF4 217 aaKnown RBP10.2□□□□□ -0.78
SDCBP-206ENST00000519115 ACSBG1Q96GR2 724 aa10.2□□□□□ -0.78
SDCBP-206ENST00000519115 VIRMAQ69YN4 1812 aaKnown RBP10.19□□□□□ -0.78
SDCBP-206ENST00000519115 RGPD3A6NKT7 1758 aaPredicted RBP10.19□□□□□ -0.78
SDCBP-206ENST00000519115 RGPD4Q7Z3J3 1758 aa10.19□□□□□ -0.78
SDCBP-206ENST00000519115 BCL9O00512 1426 aa10.19□□□□□ -0.78
SDCBP-206ENST00000519115 APBA3O96018 575 aa10.19□□□□□ -0.78
SDCBP-206ENST00000519115 AEBP1Q8IUX7 1158 aa10.19□□□□□ -0.78
SDCBP-206ENST00000519115 KCNQ2O43526 872 aa10.18□□□□□ -0.78
SDCBP-206ENST00000519115 IL13P35225 146 aa10.18□□□□□ -0.78
SDCBP-206ENST00000519115 PARD3Q8TEW0 1356 aa10.17□□□□□ -0.78
SDCBP-206ENST00000519115 PCDH11XQ9BZA7 1347 aa10.17□□□□□ -0.78
SDCBP-206ENST00000519115 PCDH11YQ9BZA8 1340 aa10.17□□□□□ -0.78
SDCBP-206ENST00000519115 PPP2R1AP30153 589 aa10.17□□□□□ -0.78
SDCBP-206ENST00000519115 MYBBP1AQ9BQG0 1328 aaKnown RBP10.16□□□□□ -0.78
SDCBP-206ENST00000519115 CYP27B1O15528 508 aa10.16□□□□□ -0.78
SDCBP-206ENST00000519115 DIAPH1O60610 1272 aaKnown RBP10.16□□□□□ -0.78
SDCBP-206ENST00000519115 EZH2Q15910 746 aaKnown RBP10.16□□□□□ -0.78
SDCBP-206ENST00000519115 SULT6B1Q6IMI4 303 aa10.16□□□□□ -0.78
SDCBP-206ENST00000519115 BCL11BQ9C0K0 894 aaPredicted RBP10.16□□□□□ -0.78
SDCBP-206ENST00000519115 KDRP35968 1356 aa10.15□□□□□ -0.78
SDCBP-206ENST00000519115 U2SURPO15042 1029 aaKnown RBP10.15□□□□□ -0.78
SDCBP-206ENST00000519115 HMOX1P09601 288 aa10.15□□□□□ -0.78
SDCBP-206ENST00000519115 SYTL4Q96C24 671 aaPredicted RBP10.15□□□□□ -0.78
SDCBP-206ENST00000519115 CAMKK2Q96RR4 588 aa10.15□□□□□ -0.78
SDCBP-206ENST00000519115 SPG7Q9UQ90 795 aa10.15□□□□□ -0.78
SDCBP-206ENST00000519115 SCN11AQ9UI33 1791 aa10.14□□□□□ -0.79
SDCBP-206ENST00000519115 PRIM1P49642 420 aaKnown RBP10.14□□□□□ -0.79
SDCBP-206ENST00000519115 CFAP53Q96M91 514 aa10.14□□□□□ -0.79
SDCBP-206ENST00000519115 LY75O60449 1722 aa10.13□□□□□ -0.79
SDCBP-206ENST00000519115 ZNF530Q6P9A1 599 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-206ENST00000519115 SAMD1Q6SPF0 538 aaPredicted RBP10.13□□□□□ -0.79
SDCBP-206ENST00000519115 PHKG2P15735 406 aa10.12□□□□□ -0.79
SDCBP-206ENST00000519115 PLEKHO1Q53GL0 409 aaPredicted RBP10.12□□□□□ -0.79
SDCBP-206ENST00000519115 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.12□□□□□ -0.79
SDCBP-206ENST00000519115 PLEKHG2Q9H7P9 1386 aa10.12□□□□□ -0.79
SDCBP-206ENST00000519115 KDM6AO15550 1401 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-206ENST00000519115 PSDA5PKW4 1024 aaPredicted RBP10.11□□□□□ -0.79
SDCBP-206ENST00000519115 PLSCR1O15162 318 aa10.11□□□□□ -0.79
SDCBP-206ENST00000519115 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
SDCBP-206ENST00000519115 TAF1LQ8IZX4 1826 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 TUBGCP6Q96RT7 1819 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 DLG5Q8TDM6 1919 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 TXNRD1Q16881 649 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 AMOTQ4VCS5 1084 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 MPRIPQ6WCQ1 1025 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 PROM2Q8N271 834 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 PAPPAQ13219 1627 aa10.1□□□□□ -0.79
SDCBP-206ENST00000519115 C5P01031 1676 aa10.09□□□□□ -0.79
SDCBP-206ENST00000519115 U2AF1L5P0DN76 240 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-206ENST00000519115 U2AF1Q01081 240 aaKnown RBP eCLIP10.09□□□□□ -0.79
SDCBP-206ENST00000519115 R3HDM1Q15032 1099 aaKnown RBP10.09□□□□□ -0.79
SDCBP-206ENST00000519115 NKX1-1Q15270 411 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-206ENST00000519115 C1orf141Q5JVX7 400 aa10.09□□□□□ -0.79
SDCBP-206ENST00000519115 PNISRQ8TF01 805 aaKnown RBP10.09□□□□□ -0.79
SDCBP-206ENST00000519115 ANO8Q9HCE9 1232 aaPredicted RBP10.09□□□□□ -0.79
SDCBP-206ENST00000519115 NUDCQ9Y266 331 aa10.09□□□□□ -0.79
SDCBP-206ENST00000519115 PRKAR2BP31323 418 aa10.08□□□□□ -0.8
SDCBP-206ENST00000519115 KCNQ4P56696 695 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms