RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 DDX54Q8TDD1 881 aaKnown RBP19.23■□□□□ 0.67
VDAC3-204ENST00000519072 CHD4Q14839 1912 aa19.23■□□□□ 0.67
VDAC3-204ENST00000519072 LY75O60449 1722 aa19.22■□□□□ 0.67
VDAC3-204ENST00000519072 RTL1A6NKG5 1358 aa19.21■□□□□ 0.67
VDAC3-204ENST00000519072 AMPHP49418 695 aa19.21■□□□□ 0.67
VDAC3-204ENST00000519072 CACNB1Q02641 598 aaPredicted RBP19.21■□□□□ 0.67
VDAC3-204ENST00000519072 COL24A1Q17RW2 1714 aa19.21■□□□□ 0.67
VDAC3-204ENST00000519072 SLC27A3Q5K4L6 730 aa19.21■□□□□ 0.67
VDAC3-204ENST00000519072 ARXQ96QS3 562 aa19.21■□□□□ 0.67
VDAC3-204ENST00000519072 TUBGCP6Q96RT7 1819 aa19.21■□□□□ 0.67
VDAC3-204ENST00000519072 MAP3K5Q99683 1374 aa19.2■□□□□ 0.66
VDAC3-204ENST00000519072 FBLN1P23142 703 aa19.2■□□□□ 0.66
VDAC3-204ENST00000519072 AKT1S1Q96B36 256 aa19.2■□□□□ 0.66
VDAC3-204ENST00000519072 MEGF6O75095 1541 aa19.19■□□□□ 0.66
VDAC3-204ENST00000519072 ZCRB1Q8TBF4 217 aaKnown RBP19.18■□□□□ 0.66
VDAC3-204ENST00000519072 SLC16A10Q8TF71 515 aa19.18■□□□□ 0.66
VDAC3-204ENST00000519072 KIF20BQ96Q89 1820 aa19.18■□□□□ 0.66
VDAC3-204ENST00000519072 NSD2O96028 1365 aa19.18■□□□□ 0.66
VDAC3-204ENST00000519072 PRIM1P49642 420 aaKnown RBP19.17■□□□□ 0.66
VDAC3-204ENST00000519072 SYTL4Q96C24 671 aaPredicted RBP19.17■□□□□ 0.66
VDAC3-204ENST00000519072 FYB1O15117 783 aa19.16■□□□□ 0.66
VDAC3-204ENST00000519072 TMF1P82094 1093 aa19.16■□□□□ 0.66
VDAC3-204ENST00000519072 RRS1Q15050 365 aaKnown RBP19.15■□□□□ 0.66
VDAC3-204ENST00000519072 GGNBP2Q9H3C7 697 aa19.15■□□□□ 0.66
VDAC3-204ENST00000519072 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
VDAC3-204ENST00000519072 PNPLA7Q6ZV29 1317 aa19.15■□□□□ 0.66
VDAC3-204ENST00000519072 USP47Q96K76 1375 aa19.15■□□□□ 0.66
VDAC3-204ENST00000519072 NBPF6Q5VWK0 638 aa19.14■□□□□ 0.65
VDAC3-204ENST00000519072 NBPF4Q96M43 638 aa19.14■□□□□ 0.65
VDAC3-204ENST00000519072 SMG6Q86US8 1419 aaKnown RBP19.14■□□□□ 0.65
VDAC3-204ENST00000519072 RNF39Q9H2S5 420 aa19.13■□□□□ 0.65
VDAC3-204ENST00000519072 POLD1P28340 1107 aa19.12■□□□□ 0.65
VDAC3-204ENST00000519072 KCNQ4P56696 695 aa19.12■□□□□ 0.65
VDAC3-204ENST00000519072 ZNF784Q8NCA9 323 aaPredicted RBP19.12■□□□□ 0.65
VDAC3-204ENST00000519072 TFCP2L1Q9NZI6 479 aa19.12■□□□□ 0.65
VDAC3-204ENST00000519072 GOLGB1Q14789 3259 aaKnown RBP19.11■□□□□ 0.65
VDAC3-204ENST00000519072 INSRP06213 1382 aa19.11■□□□□ 0.65
VDAC3-204ENST00000519072 KIF24Q5T7B8 1368 aa19.11■□□□□ 0.65
VDAC3-204ENST00000519072 USHBP1Q8N6Y0 703 aa19.11■□□□□ 0.65
VDAC3-204ENST00000519072 RAPGEF4Q8WZA2 1011 aa19.11■□□□□ 0.65
VDAC3-204ENST00000519072 CDCA8Q53HL2 280 aa19.1■□□□□ 0.65
VDAC3-204ENST00000519072 CCNL1Q9UK58 526 aaPredicted RBP19.1■□□□□ 0.65
VDAC3-204ENST00000519072 FLT4P35916 1363 aa19.09■□□□□ 0.65
VDAC3-204ENST00000519072 HSP90AB2PQ58FF8 381 aa19.09■□□□□ 0.65
VDAC3-204ENST00000519072 C5P01031 1676 aa19.08■□□□□ 0.65
VDAC3-204ENST00000519072 TATP17735 454 aaPredicted RBP19.08■□□□□ 0.64
VDAC3-204ENST00000519072 TAF1LQ8IZX4 1826 aa19.07■□□□□ 0.64
VDAC3-204ENST00000519072 PCDH11XQ9BZA7 1347 aa19.06■□□□□ 0.64
VDAC3-204ENST00000519072 PCDH11YQ9BZA8 1340 aa19.06■□□□□ 0.64
VDAC3-204ENST00000519072 GPR162Q16538 588 aa19.06■□□□□ 0.64
VDAC3-204ENST00000519072 KLHL34Q8N239 644 aa19.06■□□□□ 0.64
VDAC3-204ENST00000519072 ITGB4P16144 1822 aa19.06■□□□□ 0.64
VDAC3-204ENST00000519072 PKD1L3Q7Z443 1732 aa19.05■□□□□ 0.64
VDAC3-204ENST00000519072 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
VDAC3-204ENST00000519072 TOGARAM1Q9Y4F4 1720 aa19.05■□□□□ 0.64
VDAC3-204ENST00000519072 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
VDAC3-204ENST00000519072 NSD3Q9BZ95 1437 aa19.03■□□□□ 0.64
VDAC3-204ENST00000519072 HMGB2P26583 209 aaKnown RBP19.03■□□□□ 0.64
VDAC3-204ENST00000519072 COL23A1Q86Y22 540 aaPredicted RBP19.03■□□□□ 0.64
VDAC3-204ENST00000519072 CARD14Q9BXL6 1004 aa19.03■□□□□ 0.64
VDAC3-204ENST00000519072 MAP2P11137 1827 aaKnown RBP19.02■□□□□ 0.64
VDAC3-204ENST00000519072 NCAPD2Q15021 1401 aa19.02■□□□□ 0.64
VDAC3-204ENST00000519072 KCNA4P22459 653 aa19.02■□□□□ 0.64
VDAC3-204ENST00000519072 CYP27B1O15528 508 aa19.01■□□□□ 0.63
VDAC3-204ENST00000519072 NLGN2Q8NFZ4 835 aa19.01■□□□□ 0.63
VDAC3-204ENST00000519072 EMILIN1Q9Y6C2 1016 aa19.01■□□□□ 0.63
VDAC3-204ENST00000519072 PALLDQ8WX93 1383 aa19.01■□□□□ 0.63
VDAC3-204ENST00000519072 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
VDAC3-204ENST00000519072 C4BP0C0L5 1744 aa18.99■□□□□ 0.63
VDAC3-204ENST00000519072 PELP1Q8IZL8 1130 aaKnown RBP18.98■□□□□ 0.63
VDAC3-204ENST00000519072 FLAD1Q8NFF5 587 aa18.98■□□□□ 0.63
VDAC3-204ENST00000519072 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
VDAC3-204ENST00000519072 UBR3Q6ZT12 1888 aa18.97■□□□□ 0.63
VDAC3-204ENST00000519072 SMARCC1Q92922 1105 aaPredicted RBP18.97■□□□□ 0.63
VDAC3-204ENST00000519072 WASHC2AQ641Q2 1341 aa18.97■□□□□ 0.63
VDAC3-204ENST00000519072 NKX1-1Q15270 411 aaPredicted RBP18.96■□□□□ 0.63
VDAC3-204ENST00000519072 MSL1Q68DK7 614 aa18.96■□□□□ 0.63
VDAC3-204ENST00000519072 SPG7Q9UQ90 795 aa18.95■□□□□ 0.62
VDAC3-204ENST00000519072 PPM1GO15355 546 aaPredicted RBP18.94■□□□□ 0.62
VDAC3-204ENST00000519072 GRIN3BO60391 1043 aa18.94■□□□□ 0.62
VDAC3-204ENST00000519072 C1QTNF8P60827 252 aa18.94■□□□□ 0.62
VDAC3-204ENST00000519072 PIGBQ92521 554 aa18.94■□□□□ 0.62
VDAC3-204ENST00000519072 YBX3P16989 372 aaKnown RBP eCLIP18.93■□□□□ 0.62
VDAC3-204ENST00000519072 EYA1Q99502 592 aa18.93■□□□□ 0.62
VDAC3-204ENST00000519072 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.93■□□□□ 0.622e-6■□□□□ 8.4
VDAC3-204ENST00000519072 AK7Q96M32 723 aa18.92■□□□□ 0.62
VDAC3-204ENST00000519072 CD2APQ9Y5K6 639 aa18.92■□□□□ 0.62
VDAC3-204ENST00000519072 POLKQ9UBT6 870 aa18.91■□□□□ 0.62
VDAC3-204ENST00000519072 CLSPNQ9HAW4 1339 aa18.9■□□□□ 0.62
VDAC3-204ENST00000519072 PLEKHG2Q9H7P9 1386 aa18.9■□□□□ 0.62
VDAC3-204ENST00000519072 SENP3-EIF4A1A0A087X0R7 540 aa18.89■□□□□ 0.61
VDAC3-204ENST00000519072 C1QBPQ07021 282 aaKnown RBP18.89■□□□□ 0.61
VDAC3-204ENST00000519072 AMIGO3Q86WK7 504 aa18.89■□□□□ 0.61
VDAC3-204ENST00000519072 IFNL2Q8IZJ0 200 aa18.89■□□□□ 0.61
VDAC3-204ENST00000519072 LOC102724428A0A0B4J2F2 783 aa18.88■□□□□ 0.61
VDAC3-204ENST00000519072 GIGYF1O75420 1035 aaPredicted RBP18.88■□□□□ 0.61
VDAC3-204ENST00000519072 PHKG2P15735 406 aa18.88■□□□□ 0.61
VDAC3-204ENST00000519072 SIK1P57059 783 aa18.88■□□□□ 0.61
VDAC3-204ENST00000519072 TMOD3Q9NYL9 352 aa18.88■□□□□ 0.61
VDAC3-204ENST00000519072 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms