RNA–Protein interactions for RNA: ENST00000518877.1

PCM1-208, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-208ENST00000518877 FOXK2Q01167 660 aa7.27□□□□□ -1.25
PCM1-208ENST00000518877 KDM4CQ9H3R0 1056 aa7.27□□□□□ -1.25
PCM1-208ENST00000518877 GPBP1L1Q9HC44 474 aaPredicted RBP7.27□□□□□ -1.25
PCM1-208ENST00000518877 CUEDC1Q9NWM3 386 aaPredicted RBP7.27□□□□□ -1.25
PCM1-208ENST00000518877 FOXR1Q6PIV2 292 aa7.26□□□□□ -1.25
PCM1-208ENST00000518877 RIPOR1Q6ZS17 1223 aa7.26□□□□□ -1.25
PCM1-208ENST00000518877 KDF1Q8NAX2 398 aaPredicted RBP7.26□□□□□ -1.25
PCM1-208ENST00000518877 FAM117AQ9C073 453 aa7.26□□□□□ -1.25
PCM1-208ENST00000518877 ESPNB1AK53 854 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 ATP5J2-PTCD1G3V325 749 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 GPR25O00155 361 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 MEN1O00255 615 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 RNF144AP50876 292 aaPredicted RBP7.25□□□□□ -1.25
PCM1-208ENST00000518877 GAS6Q14393 721 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 SEPT12Q8IYM1 358 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 MBIPQ9NS73 344 aa7.25□□□□□ -1.25
PCM1-208ENST00000518877 ZNF837Q96EG3 531 aaPredicted RBP7.24□□□□□ -1.25
PCM1-208ENST00000518877 NEDD1Q8NHV4 660 aa7.23□□□□□ -1.25
PCM1-208ENST00000518877 GMCL1Q96IK5 515 aa7.23□□□□□ -1.25
PCM1-208ENST00000518877 GAS2L1Q99501 681 aaPredicted RBP7.23□□□□□ -1.25
PCM1-208ENST00000518877 PCDHB9Q9Y5E1 797 aa7.23□□□□□ -1.25
PCM1-208ENST00000518877 IGF1RP08069 1367 aa7.22□□□□□ -1.25
PCM1-208ENST00000518877 PHF20L1A8MW92 1017 aa7.22□□□□□ -1.25
PCM1-208ENST00000518877 RFC5P40937 340 aa7.22□□□□□ -1.25
PCM1-208ENST00000518877 SLC27A3Q5K4L6 730 aa7.22□□□□□ -1.25
PCM1-208ENST00000518877 PODNQ7Z5L7 613 aa7.22□□□□□ -1.25
PCM1-208ENST00000518877 TRIM22Q8IYM9 498 aa7.22□□□□□ -1.25
PCM1-208ENST00000518877 H7C1W4 665 aa7.21□□□□□ -1.26
PCM1-208ENST00000518877 GIGYF1O75420 1035 aaPredicted RBP7.21□□□□□ -1.26
PCM1-208ENST00000518877 DBN1Q16643 649 aa7.21□□□□□ -1.26
PCM1-208ENST00000518877 NLRP3Q96P20 1036 aa7.21□□□□□ -1.26
PCM1-208ENST00000518877 TRERF1Q96PN7 1200 aa7.21□□□□□ -1.26
PCM1-208ENST00000518877 CNTNAP5Q8WYK1 1306 aa7.21□□□□□ -1.26
PCM1-208ENST00000518877 A0A1W2PRU2 124 aa7.2□□□□□ -1.26
PCM1-208ENST00000518877 GPC1P35052 558 aa7.2□□□□□ -1.26
PCM1-208ENST00000518877 POU4F2Q12837 409 aa7.2□□□□□ -1.26
PCM1-208ENST00000518877 GTPBP3Q969Y2 492 aaKnown RBP7.2□□□□□ -1.26
PCM1-208ENST00000518877 ZBBXA8MT70 800 aa7.19□□□□□ -1.26
PCM1-208ENST00000518877 BCRP11274 1271 aa7.19□□□□□ -1.26
PCM1-208ENST00000518877 CC2D2BQ6DHV5 1058 aa7.19□□□□□ -1.26
PCM1-208ENST00000518877 BEND7Q8N7W2 519 aaPredicted RBP7.19□□□□□ -1.26
PCM1-208ENST00000518877 DYRK1BQ9Y463 629 aa7.19□□□□□ -1.26
PCM1-208ENST00000518877 MSTNO14793 375 aa7.18□□□□□ -1.26
PCM1-208ENST00000518877 MX2P20592 715 aa7.18□□□□□ -1.26
PCM1-208ENST00000518877 PLA2G4EQ3MJ16 856 aa7.18□□□□□ -1.26
PCM1-208ENST00000518877 RNF20Q5VTR2 975 aa7.18□□□□□ -1.26
PCM1-208ENST00000518877 TRIM34Q9BYJ4 488 aa7.18□□□□□ -1.26
PCM1-208ENST00000518877 ESF1Q9H501 851 aaKnown RBP7.18□□□□□ -1.26
PCM1-208ENST00000518877 NSFL1CQ9UNZ2 370 aaKnown RBP7.18□□□□□ -1.26
PCM1-208ENST00000518877 CYP2U1Q7Z449 544 aa7.17□□□□□ -1.26
PCM1-208ENST00000518877 CCDC125Q86Z20 511 aa7.17□□□□□ -1.26
PCM1-208ENST00000518877 DCAF5Q96JK2 942 aa7.17□□□□□ -1.26
PCM1-208ENST00000518877 FBXO45P0C2W1 286 aa7.16□□□□□ -1.26
PCM1-208ENST00000518877 ERVK-9P63128 1117 aa7.16□□□□□ -1.26
PCM1-208ENST00000518877 GALNT6Q8NCL4 622 aa7.16□□□□□ -1.26
PCM1-208ENST00000518877 ACDQ96AP0 544 aa7.16□□□□□ -1.26
PCM1-208ENST00000518877 PCMTD1Q96MG8 357 aaPredicted RBP7.16□□□□□ -1.26
PCM1-208ENST00000518877 TMEM259Q4ZIN3 620 aa7.15□□□□□ -1.26
PCM1-208ENST00000518877 NBPF10Q6P3W6 841 aaKnown RBP7.15□□□□□ -1.26
PCM1-208ENST00000518877 NBPF15Q8N660 670 aa7.15□□□□□ -1.26
PCM1-208ENST00000518877 NUCKS1Q9H1E3 243 aaKnown RBP7.15□□□□□ -1.26
PCM1-208ENST00000518877 TIMMDC1Q9NPL8 285 aa7.15□□□□□ -1.26
PCM1-208ENST00000518877 CLN3Q13286 438 aa7.14□□□□□ -1.27
PCM1-208ENST00000518877 TAS1R3Q7RTX0 852 aa7.14□□□□□ -1.27
PCM1-208ENST00000518877 SPOCK3Q9BQ16 436 aa7.14□□□□□ -1.27
PCM1-208ENST00000518877 GRIP2Q9C0E4 1043 aa7.14□□□□□ -1.27
PCM1-208ENST00000518877 ARHGEF10LQ9HCE6 1279 aa7.14□□□□□ -1.27
PCM1-208ENST00000518877 PCDHB11Q9Y5F2 797 aa7.14□□□□□ -1.27
PCM1-208ENST00000518877 WASLO00401 505 aaPredicted RBP7.13□□□□□ -1.27
PCM1-208ENST00000518877 SCTRP47872 440 aa7.13□□□□□ -1.27
PCM1-208ENST00000518877 ZNF330Q9Y3S2 320 aaPredicted RBP7.13□□□□□ -1.27
PCM1-208ENST00000518877 SPATA31C2B4DYI2 1134 aa7.12□□□□□ -1.27
PCM1-208ENST00000518877 ADAM23O75077 832 aa7.12□□□□□ -1.27
PCM1-208ENST00000518877 F11P03951 625 aa7.12□□□□□ -1.27
PCM1-208ENST00000518877 ZNF592Q92610 1267 aa7.12□□□□□ -1.27
PCM1-208ENST00000518877 RAB6BQ9NRW1 208 aa7.12□□□□□ -1.27
PCM1-208ENST00000518877 OIP5O43482 229 aa7.11□□□□□ -1.27
PCM1-208ENST00000518877 MAP2K3P46734 347 aa7.11□□□□□ -1.27
PCM1-208ENST00000518877 MCCD1P59942 119 aaPredicted RBP7.11□□□□□ -1.27
PCM1-208ENST00000518877 NR1H3Q13133 447 aa7.11□□□□□ -1.27
PCM1-208ENST00000518877 WDR44Q5JSH3 913 aa7.11□□□□□ -1.27
PCM1-208ENST00000518877 OXCT2Q9BYC2 517 aaPredicted RBP7.11□□□□□ -1.27
PCM1-208ENST00000518877 GPAMQ9HCL2 828 aa7.11□□□□□ -1.27
PCM1-208ENST00000518877 LRRC4BQ9NT99 713 aa7.11□□□□□ -1.27
PCM1-208ENST00000518877 PHKA2P46019 1235 aa7.1□□□□□ -1.27
PCM1-208ENST00000518877 GJD4Q96KN9 370 aaPredicted RBP7.1□□□□□ -1.27
PCM1-208ENST00000518877 OSBPL3Q9H4L5 887 aa7.1□□□□□ -1.27
PCM1-208ENST00000518877 RRAGCQ9HB90 399 aa7.1□□□□□ -1.27
PCM1-208ENST00000518877 PHF24Q9UPV7 400 aa7.1□□□□□ -1.27
PCM1-208ENST00000518877 PROCP04070 461 aa7.09□□□□□ -1.27
PCM1-208ENST00000518877 ITGB2P05107 769 aa7.09□□□□□ -1.27
PCM1-208ENST00000518877 GTF2E1P29083 439 aaPredicted RBP7.09□□□□□ -1.27
PCM1-208ENST00000518877 GOPCQ9HD26 462 aa7.09□□□□□ -1.27
PCM1-208ENST00000518877 TRAK2O60296 914 aa7.08□□□□□ -1.28
PCM1-208ENST00000518877 SNRPNP63162 240 aaKnown RBP7.08□□□□□ -1.28
PCM1-208ENST00000518877 CNKSR1Q969H4 720 aa7.08□□□□□ -1.28
PCM1-208ENST00000518877 ZSCAN10Q96SZ4 725 aaPredicted RBP7.08□□□□□ -1.28
PCM1-208ENST00000518877 CFHR5Q9BXR6 569 aa7.08□□□□□ -1.28
PCM1-208ENST00000518877 MKL2Q9ULH7 1088 aa7.08□□□□□ -1.28
PCM1-208ENST00000518877 MYCP01106 439 aaPredicted RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms