RNA–Protein interactions for RNA: ENST00000518587.1

NPM1-205, Transcript of nucleophosmin 1, humanhuman

TSL 2

Gene NPM1, Length 670 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-205ENST00000518587 EFCAB6Q5THR3 1501 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 TMEM2Q9UHN6 1383 aa9.59□□□□□ -0.87
NPM1-205ENST00000518587 LRRC7Q96NW7 1537 aa9.58□□□□□ -0.88
NPM1-205ENST00000518587 USP46P62068 366 aa9.58□□□□□ -0.88
NPM1-205ENST00000518587 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
NPM1-205ENST00000518587 DDRGK1Q96HY6 314 aa9.58□□□□□ -0.88
NPM1-205ENST00000518587 TBC1D2Q9BYX2 928 aa9.58□□□□□ -0.88
NPM1-205ENST00000518587 COPS2P61201 443 aa9.57□□□□□ -0.88
NPM1-205ENST00000518587 MORN1Q5T089 497 aa9.57□□□□□ -0.88
NPM1-205ENST00000518587 BLOC1S3Q6QNY0 202 aa9.57□□□□□ -0.88
NPM1-205ENST00000518587 IL27Q8NEV9 243 aa9.57□□□□□ -0.88
NPM1-205ENST00000518587 MTRQ99707 1265 aa9.57□□□□□ -0.88
NPM1-205ENST00000518587 NOS1P29475 1434 aa9.56□□□□□ -0.88
NPM1-205ENST00000518587 ANKRD50Q9ULJ7 1429 aa9.56□□□□□ -0.88
NPM1-205ENST00000518587 NKTRP30414 1462 aaKnown RBP9.56□□□□□ -0.88
NPM1-205ENST00000518587 ROCK1Q13464 1354 aa9.56□□□□□ -0.88
NPM1-205ENST00000518587 HOXA2O43364 376 aa9.56□□□□□ -0.88
NPM1-205ENST00000518587 PIK3C2BO00750 1634 aa9.56□□□□□ -0.88
NPM1-205ENST00000518587 ADGRB3O60242 1522 aa9.56□□□□□ -0.88
NPM1-205ENST00000518587 HSPA1LP34931 641 aa9.55□□□□□ -0.88
NPM1-205ENST00000518587 PIP4K2BP78356 416 aa9.55□□□□□ -0.88
NPM1-205ENST00000518587 GRIPAP1Q4V328 841 aa9.55□□□□□ -0.88
NPM1-205ENST00000518587 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.55□□□□□ -0.88
NPM1-205ENST00000518587 HLA-CQ95604 372 aa9.55□□□□□ -0.88
NPM1-205ENST00000518587 NCOA3Q9Y6Q9 1424 aa9.55□□□□□ -0.88
NPM1-205ENST00000518587 TET3O43151 1660 aa9.55□□□□□ -0.88
NPM1-205ENST00000518587 MED1Q15648 1581 aaPredicted RBP9.54□□□□□ -0.88
NPM1-205ENST00000518587 MOXD2PA6NHM9 499 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 ITGBL1O95965 494 aaPredicted RBP9.54□□□□□ -0.88
NPM1-205ENST00000518587 KCNA6P17658 529 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 NDUFV2P19404 249 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 DIXDC1Q155Q3 683 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 SCUBE3Q8IX30 993 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 IL21Q9HBE4 155 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 SLC27A5Q9Y2P5 690 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 FAM135BQ49AJ0 1406 aa9.54□□□□□ -0.88
NPM1-205ENST00000518587 CFAP65Q6ZU64 1925 aaKnown RBP9.54□□□□□ -0.88
NPM1-205ENST00000518587 GCC2Q8IWJ2 1684 aa9.53□□□□□ -0.88
NPM1-205ENST00000518587 GUCA2AQ02747 115 aa9.53□□□□□ -0.88
NPM1-205ENST00000518587 MYSM1Q5VVJ2 828 aa9.53□□□□□ -0.88
NPM1-205ENST00000518587 ILDR2Q71H61 639 aa9.53□□□□□ -0.88
NPM1-205ENST00000518587 PIK3R4Q99570 1358 aa9.52□□□□□ -0.88
NPM1-205ENST00000518587 ZPR1O75312 459 aa9.52□□□□□ -0.89
NPM1-205ENST00000518587 NR1I2O75469 434 aa9.52□□□□□ -0.89
NPM1-205ENST00000518587 LTKP29376 864 aa9.52□□□□□ -0.89
NPM1-205ENST00000518587 IDI1Q13907 227 aa9.52□□□□□ -0.89
NPM1-205ENST00000518587 FAM50AQ14320 339 aaKnown RBP9.52□□□□□ -0.89
NPM1-205ENST00000518587 NWD1Q149M9 1564 aa9.52□□□□□ -0.89
NPM1-205ENST00000518587 PLEKHG1Q9ULL1 1385 aa9.51□□□□□ -0.89
NPM1-205ENST00000518587 UNC13BO14795 1591 aa9.51□□□□□ -0.89
NPM1-205ENST00000518587 DIP2AQ14689 1571 aa9.51□□□□□ -0.89
NPM1-205ENST00000518587 RSPH6AQ9H0K4 717 aa9.51□□□□□ -0.89
NPM1-205ENST00000518587 MSH6P52701 1360 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 STRCP1A6NGW2 1772 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 SPTLC1O15269 473 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 KCNC4Q03721 635 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 RSBN1LQ6PCB5 846 aaPredicted RBP9.5□□□□□ -0.89
NPM1-205ENST00000518587 RIC3Q7Z5B4 369 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 CHIC2Q9UKJ5 165 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 PCDHGC3Q9UN70 934 aa9.5□□□□□ -0.89
NPM1-205ENST00000518587 ALKQ9UM73 1620 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 PPP1R15AO75807 674 aaPredicted RBP9.49□□□□□ -0.89
NPM1-205ENST00000518587 FDX1P10109 184 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 GJA5P36382 358 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 SH3D19Q5HYK7 790 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 THAP11Q96EK4 314 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 POLR3EQ9NVU0 708 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 PLA2G2EQ9NZK7 142 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 TMEM94Q12767 1356 aa9.49□□□□□ -0.89
NPM1-205ENST00000518587 SKIV2LQ15477 1246 aaKnown RBP9.48□□□□□ -0.89
NPM1-205ENST00000518587 PROSER2Q86WR7 435 aaPredicted RBP9.48□□□□□ -0.89
NPM1-205ENST00000518587 NKX2-3Q8TAU0 364 aa9.48□□□□□ -0.89
NPM1-205ENST00000518587 LIMD1Q9UGP4 676 aa9.48□□□□□ -0.89
NPM1-205ENST00000518587 TBX22Q9Y458 520 aa9.48□□□□□ -0.89
NPM1-205ENST00000518587 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
NPM1-205ENST00000518587 PCDHB15Q9Y5E8 787 aa9.48□□□□□ -0.89
NPM1-205ENST00000518587 IQGAP3Q86VI3 1631 aa9.48□□□□□ -0.89
NPM1-205ENST00000518587 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
NPM1-205ENST00000518587 BRICD5Q6PL45 260 aa9.47□□□□□ -0.89
NPM1-205ENST00000518587 RNF19BQ6ZMZ0 732 aa9.47□□□□□ -0.89
NPM1-205ENST00000518587 RIMS2Q9UQ26 1411 aa9.47□□□□□ -0.89
NPM1-205ENST00000518587 TMEM131LA2VDJ0 1609 aa9.46□□□□□ -0.89
NPM1-205ENST00000518587 TLL1O43897 1013 aa9.46□□□□□ -0.9
NPM1-205ENST00000518587 Q3C1V9 767 aa9.46□□□□□ -0.9
NPM1-205ENST00000518587 IFFO2Q5TF58 517 aa9.46□□□□□ -0.9
NPM1-205ENST00000518587 XIRP1Q702N8 1843 aaKnown RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 FMNL1O95466 1100 aaPredicted RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 CLK2P49760 499 aaKnown RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 TUSC1Q2TAM9 212 aa9.45□□□□□ -0.9
NPM1-205ENST00000518587 PROCA1Q8NCQ7 364 aaPredicted RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 SYMPKQ92797 1274 aaKnown RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 GOPCQ9HD26 462 aa9.45□□□□□ -0.9
NPM1-205ENST00000518587 ACIN1Q9UKV3 1341 aaKnown RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 CHD2O14647 1828 aaKnown RBP9.45□□□□□ -0.9
NPM1-205ENST00000518587 SPSB2Q99619 263 aa9.44□□□□□ -0.9
NPM1-205ENST00000518587 DCCP43146 1447 aa9.44□□□□□ -0.9
NPM1-205ENST00000518587 TRPM2O94759 1503 aa9.44□□□□□ -0.9
NPM1-205ENST00000518587 ROBO1Q9Y6N7 1651 aa9.43□□□□□ -0.9
NPM1-205ENST00000518587 NUP155O75694 1391 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms