RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 NCOA4Q13772 614 aa7.17□□□□□ -1.26
VPS13B-207ENST00000518569 PBXIP1Q96AQ6 731 aa7.17□□□□□ -1.26
VPS13B-207ENST00000518569 TRIM47Q96LD4 638 aa7.17□□□□□ -1.26
VPS13B-207ENST00000518569 KLF16Q9BXK1 252 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-207ENST00000518569 ATP5J2-PTCD1G3V325 749 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 OXLD1Q5BKU9 147 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 KANK4Q5T7N3 995 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-207ENST00000518569 CC2D2BQ6DHV5 1058 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 TRIM50Q86XT4 487 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 KIFC2Q96AC6 838 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 CDCA7Q9BWT1 371 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-207ENST00000518569 VRTNQ9H8Y1 702 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 NOD1Q9Y239 953 aa7.16□□□□□ -1.26
VPS13B-207ENST00000518569 MYCP01106 439 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-207ENST00000518569 RFX1P22670 979 aa7.15□□□□□ -1.26
VPS13B-207ENST00000518569 ZNF784Q8NCA9 323 aaPredicted RBP7.15□□□□□ -1.26
VPS13B-207ENST00000518569 TMPRSS4Q9NRS4 437 aa7.15□□□□□ -1.26
VPS13B-207ENST00000518569 MKRN1Q9UHC7 482 aaKnown RBP7.15□□□□□ -1.26
VPS13B-207ENST00000518569 LILRA1O75019 489 aa7.14□□□□□ -1.27
VPS13B-207ENST00000518569 BMP1P13497 986 aa7.14□□□□□ -1.27
VPS13B-207ENST00000518569 ATP1A2P50993 1020 aa7.14□□□□□ -1.27
VPS13B-207ENST00000518569 WDR4P57081 412 aaKnown RBP7.14□□□□□ -1.27
VPS13B-207ENST00000518569 DEPDC4Q8N2C3 294 aa7.14□□□□□ -1.27
VPS13B-207ENST00000518569 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-207ENST00000518569 CAPN5O15484 640 aaPredicted RBP7.13□□□□□ -1.27
VPS13B-207ENST00000518569 TIMP2P16035 220 aa7.13□□□□□ -1.27
VPS13B-207ENST00000518569 NFX1Q12986 1120 aaKnown RBP7.13□□□□□ -1.27
VPS13B-207ENST00000518569 Q6ZVU0 165 aa7.13□□□□□ -1.27
VPS13B-207ENST00000518569 ESF1Q9H501 851 aaKnown RBP7.13□□□□□ -1.27
VPS13B-207ENST00000518569 ACIN1Q9UKV3 1341 aaKnown RBP7.12□□□□□ -1.27
VPS13B-207ENST00000518569 FAM196BA6NMK8 535 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 ATG7O95352 703 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 ZIC2O95409 532 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-207ENST00000518569 ADD1P35611 737 aaKnown RBP7.12□□□□□ -1.27
VPS13B-207ENST00000518569 SCTRP47872 440 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 LCE2AQ5TA79 106 aaPredicted RBP7.12□□□□□ -1.27
VPS13B-207ENST00000518569 ITPKCQ96DU7 683 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 OSBPL3Q9H4L5 887 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 CYLDQ9NQC7 956 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 PCDHGA11Q9Y5H2 935 aa7.12□□□□□ -1.27
VPS13B-207ENST00000518569 TERTO14746 1132 aaKnown RBP7.11□□□□□ -1.27
VPS13B-207ENST00000518569 GTF2IP78347 998 aa7.11□□□□□ -1.27
VPS13B-207ENST00000518569 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
VPS13B-207ENST00000518569 LARP1Q6PKG0 1096 aaKnown RBP7.11□□□□□ -1.27
VPS13B-207ENST00000518569 CYP2U1Q7Z449 544 aa7.11□□□□□ -1.27
VPS13B-207ENST00000518569 LARGE2Q8N3Y3 721 aa7.11□□□□□ -1.27
VPS13B-207ENST00000518569 ADH1AP07327 375 aa7.1□□□□□ -1.27
VPS13B-207ENST00000518569 RASA1P20936 1047 aa7.1□□□□□ -1.27
VPS13B-207ENST00000518569 SIX5Q8N196 739 aa7.1□□□□□ -1.27
VPS13B-207ENST00000518569 OGFOD1Q8N543 542 aa7.1□□□□□ -1.27
VPS13B-207ENST00000518569 ZFAND3Q9H8U3 227 aa7.1□□□□□ -1.27
VPS13B-207ENST00000518569 DNAAF2Q9NVR5 837 aaKnown RBP7.1□□□□□ -1.27
VPS13B-207ENST00000518569 ZBTB7BO15156 539 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-207ENST00000518569 GNRH1P01148 92 aa7.09□□□□□ -1.27
VPS13B-207ENST00000518569 CLDN10P78369 228 aa7.09□□□□□ -1.27
VPS13B-207ENST00000518569 INSM1Q01101 510 aaPredicted RBP7.09□□□□□ -1.27
VPS13B-207ENST00000518569 PTK7Q13308 1070 aa7.09□□□□□ -1.27
VPS13B-207ENST00000518569 MEIOBQ8N635 442 aa7.09□□□□□ -1.27
VPS13B-207ENST00000518569 SLC16A10Q8TF71 515 aa7.09□□□□□ -1.27
VPS13B-207ENST00000518569 USP17L15C9J2P7 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L10C9JJH3 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L13C9JLJ4 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L12C9JPN9 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L11C9JVI0 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L21D6R901 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L18D6R9N7 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L22D6RA61 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L17D6RBQ6 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L19D6RCP7 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L20D6RJB6 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 USP17L24Q0WX57 530 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 CBLBQ13191 982 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 CRTC2Q53ET0 693 aaPredicted RBP7.08□□□□□ -1.28
VPS13B-207ENST00000518569 CDCA8Q53HL2 280 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 TRIM46Q7Z4K8 759 aa7.08□□□□□ -1.28
VPS13B-207ENST00000518569 WASLO00401 505 aaPredicted RBP7.07□□□□□ -1.28
VPS13B-207ENST00000518569 DKK1O94907 266 aa7.07□□□□□ -1.28
VPS13B-207ENST00000518569 PTGIRP43119 386 aa7.07□□□□□ -1.28
VPS13B-207ENST00000518569 CCDC102BQ68D86 513 aa7.07□□□□□ -1.28
VPS13B-207ENST00000518569 ANKMY2Q8IV38 441 aa7.07□□□□□ -1.28
VPS13B-207ENST00000518569 TSEN34Q9BSV6 310 aaKnown RBP7.07□□□□□ -1.28
VPS13B-207ENST00000518569 M0R2N6 131 aa7.06□□□□□ -1.28
VPS13B-207ENST00000518569 PDE4CQ08493 712 aa7.06□□□□□ -1.28
VPS13B-207ENST00000518569 ESCO1Q5FWF5 840 aa7.06□□□□□ -1.28
VPS13B-207ENST00000518569 KDF1Q8NAX2 398 aaPredicted RBP7.06□□□□□ -1.28
VPS13B-207ENST00000518569 ARXQ96QS3 562 aa7.06□□□□□ -1.28
VPS13B-207ENST00000518569 STK17AQ9UEE5 414 aa7.06□□□□□ -1.28
VPS13B-207ENST00000518569 NOVA2Q9UNW9 492 aaKnown RBP7.06□□□□□ -1.28
VPS13B-207ENST00000518569 KIAA1024Q9UPX6 916 aa7.06□□□□□ -1.28
VPS13B-207ENST00000518569 WIPF1O43516 503 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 VEGFBP49765 207 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 SCNN1DP51172 638 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 SEC13P55735 322 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 PSME1Q06323 249 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 SCARF1Q14162 830 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 TPCN2Q8NHX9 752 aa7.05□□□□□ -1.28
VPS13B-207ENST00000518569 NXF1Q9UBU9 619 aaKnown RBP7.05□□□□□ -1.28
VPS13B-207ENST00000518569 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
VPS13B-207ENST00000518569 TMEM229AB2RXF0 380 aa7.04□□□□□ -1.28
VPS13B-207ENST00000518569 BACH1O14867 736 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms