RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 TFCP2L1Q9NZI6 479 aa25.18■■□□□ 1.62
TFF3-204ENST00000518498 FYB1O15117 783 aa25.17■■□□□ 1.62
TFF3-204ENST00000518498 KCNQ4P56696 695 aa25.17■■□□□ 1.62
TFF3-204ENST00000518498 TMF1P82094 1093 aa25.17■■□□□ 1.62
TFF3-204ENST00000518498 POLD1P28340 1107 aa25.16■■□□□ 1.62
TFF3-204ENST00000518498 RRS1Q15050 365 aaKnown RBP25.16■■□□□ 1.62
TFF3-204ENST00000518498 NBPF6Q5VWK0 638 aa25.16■■□□□ 1.62
TFF3-204ENST00000518498 ZNF784Q8NCA9 323 aaPredicted RBP25.16■■□□□ 1.62
TFF3-204ENST00000518498 NBPF4Q96M43 638 aa25.16■■□□□ 1.62
TFF3-204ENST00000518498 GGNBP2Q9H3C7 697 aa25.16■■□□□ 1.62
TFF3-204ENST00000518498 MAP3K5Q99683 1374 aa25.16■■□□□ 1.62
TFF3-204ENST00000518498 PNPLA7Q6ZV29 1317 aa25.14■■□□□ 1.62
TFF3-204ENST00000518498 RTL1A6NKG5 1358 aa25.13■■□□□ 1.61
TFF3-204ENST00000518498 CGNL1Q0VF96 1302 aa25.12■■□□□ 1.61
TFF3-204ENST00000518498 GPR162Q16538 588 aa25.12■■□□□ 1.61
TFF3-204ENST00000518498 RAPGEF4Q8WZA2 1011 aa25.12■■□□□ 1.61
TFF3-204ENST00000518498 RGPD2P0DJD1 1756 aa25.11■■□□□ 1.61
TFF3-204ENST00000518498 KLHL34Q8N239 644 aa25.11■■□□□ 1.61
TFF3-204ENST00000518498 USHBP1Q8N6Y0 703 aa25.11■■□□□ 1.61
TFF3-204ENST00000518498 CCNL1Q9UK58 526 aaPredicted RBP25.11■■□□□ 1.61
TFF3-204ENST00000518498 MEGF6O75095 1541 aa25.11■■□□□ 1.61
TFF3-204ENST00000518498 NSD2O96028 1365 aa25.1■■□□□ 1.61
TFF3-204ENST00000518498 EIF4G2P78344 907 aaKnown RBP eCLIP25.1■■□□□ 1.61
TFF3-204ENST00000518498 TATP17735 454 aaPredicted RBP25.09■■□□□ 1.61
TFF3-204ENST00000518498 CDCA8Q53HL2 280 aa25.09■■□□□ 1.61
TFF3-204ENST00000518498 SMG6Q86US8 1419 aaKnown RBP25.09■■□□□ 1.61
TFF3-204ENST00000518498 QSER1Q2KHR3 1735 aa25.09■■□□□ 1.61
TFF3-204ENST00000518498 DOT1LQ8TEK3 1739 aa25.09■■□□□ 1.61
TFF3-204ENST00000518498 USP47Q96K76 1375 aa25.08■■□□□ 1.61
TFF3-204ENST00000518498 HSP90AB2PQ58FF8 381 aa25.08■■□□□ 1.61
TFF3-204ENST00000518498 MSH5O43196 834 aa25.06■■□□□ 1.6
TFF3-204ENST00000518498 LY75O60449 1722 aa25.06■■□□□ 1.6
TFF3-204ENST00000518498 SHANK3Q9BYB0 1731 aa25.06■■□□□ 1.6
TFF3-204ENST00000518498 INSRP06213 1382 aa25.05■■□□□ 1.6
TFF3-204ENST00000518498 HMGB2P26583 209 aaKnown RBP25.04■■□□□ 1.6
TFF3-204ENST00000518498 COL23A1Q86Y22 540 aaPredicted RBP25.03■■□□□ 1.6
TFF3-204ENST00000518498 PELP1Q8IZL8 1130 aaKnown RBP25.03■■□□□ 1.6
TFF3-204ENST00000518498 CHD4Q14839 1912 aa25.03■■□□□ 1.6
TFF3-204ENST00000518498 COL24A1Q17RW2 1714 aa25.02■■□□□ 1.6
TFF3-204ENST00000518498 PCDH11XQ9BZA7 1347 aa25.02■■□□□ 1.6
TFF3-204ENST00000518498 PCDH11YQ9BZA8 1340 aa25.02■■□□□ 1.6
TFF3-204ENST00000518498 KIF24Q5T7B8 1368 aa25.02■■□□□ 1.6
TFF3-204ENST00000518498 FLT4P35916 1363 aa25.01■■□□□ 1.59
TFF3-204ENST00000518498 HSPA5P11021 654 aaKnown RBP25■■□□□ 1.59
TFF3-204ENST00000518498 MPRIPQ6WCQ1 1025 aa25■■□□□ 1.59
TFF3-204ENST00000518498 NLGN2Q8NFZ4 835 aa25■■□□□ 1.59
TFF3-204ENST00000518498 CARD14Q9BXL6 1004 aa25■■□□□ 1.59
TFF3-204ENST00000518498 TUBGCP6Q96RT7 1819 aa24.99■■□□□ 1.59
TFF3-204ENST00000518498 ZNF316A6NFI3 1004 aaPredicted RBP24.98■■□□□ 1.59
TFF3-204ENST00000518498 CYP27B1O15528 508 aa24.96■■□□□ 1.59
TFF3-204ENST00000518498 FLAD1Q8NFF5 587 aa24.96■■□□□ 1.59
TFF3-204ENST00000518498 EMILIN1Q9Y6C2 1016 aa24.96■■□□□ 1.59
TFF3-204ENST00000518498 PPM1GO15355 546 aaPredicted RBP24.95■■□□□ 1.58
TFF3-204ENST00000518498 KIF20BQ96Q89 1820 aa24.95■■□□□ 1.58
TFF3-204ENST00000518498 PALLDQ8WX93 1383 aa24.94■■□□□ 1.58
TFF3-204ENST00000518498 C1QTNF8P60827 252 aa24.94■■□□□ 1.58
TFF3-204ENST00000518498 MSL1Q68DK7 614 aa24.94■■□□□ 1.58
TFF3-204ENST00000518498 SMARCC1Q92922 1105 aaPredicted RBP24.94■■□□□ 1.58
TFF3-204ENST00000518498 GRIN3BO60391 1043 aa24.93■■□□□ 1.58
TFF3-204ENST00000518498 UTRNP46939 3433 aa24.93■■□□□ 1.58
TFF3-204ENST00000518498 SPG7Q9UQ90 795 aa24.92■■□□□ 1.58
TFF3-204ENST00000518498 NSD3Q9BZ95 1437 aa24.92■■□□□ 1.58
TFF3-204ENST00000518498 NKX1-1Q15270 411 aaPredicted RBP24.9■■□□□ 1.58
TFF3-204ENST00000518498 WASHC2AQ641Q2 1341 aa24.89■■□□□ 1.58
TFF3-204ENST00000518498 C5P01031 1676 aa24.89■■□□□ 1.58
TFF3-204ENST00000518498 SENP3-EIF4A1A0A087X0R7 540 aa24.89■■□□□ 1.58
TFF3-204ENST00000518498 YBX3P16989 372 aaKnown RBP eCLIP24.89■■□□□ 1.58
TFF3-204ENST00000518498 PIGBQ92521 554 aa24.89■■□□□ 1.58
TFF3-204ENST00000518498 AK7Q96M32 723 aa24.88■■□□□ 1.57
TFF3-204ENST00000518498 CD2APQ9Y5K6 639 aa24.88■■□□□ 1.57
TFF3-204ENST00000518498 EYA1Q99502 592 aa24.87■■□□□ 1.57
TFF3-204ENST00000518498 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.86■■□□□ 1.57
TFF3-204ENST00000518498 GIGYF1O75420 1035 aaPredicted RBP24.85■■□□□ 1.57
TFF3-204ENST00000518498 POLKQ9UBT6 870 aa24.84■■□□□ 1.57
TFF3-204ENST00000518498 NCAPD2Q15021 1401 aa24.84■■□□□ 1.57
TFF3-204ENST00000518498 TAF1LQ8IZX4 1826 aa24.84■■□□□ 1.57
TFF3-204ENST00000518498 TMOD3Q9NYL9 352 aa24.83■■□□□ 1.57
TFF3-204ENST00000518498 ITGB4P16144 1822 aa24.83■■□□□ 1.57
TFF3-204ENST00000518498 LOC102724428A0A0B4J2F2 783 aa24.82■■□□□ 1.56
TFF3-204ENST00000518498 PHF14O94880 888 aa24.82■■□□□ 1.56
TFF3-204ENST00000518498 SIK1P57059 783 aa24.82■■□□□ 1.56
TFF3-204ENST00000518498 PKD1L3Q7Z443 1732 aa24.82■■□□□ 1.56
TFF3-204ENST00000518498 IFNL2Q8IZJ0 200 aa24.82■■□□□ 1.56
TFF3-204ENST00000518498 C4BP0C0L5 1744 aa24.81■■□□□ 1.56
TFF3-204ENST00000518498 TOGARAM1Q9Y4F4 1720 aa24.81■■□□□ 1.56
TFF3-204ENST00000518498 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.81■■□□□ 1.56
TFF3-204ENST00000518498 POLR3GLQ9BT43 218 aa24.81■■□□□ 1.56
TFF3-204ENST00000518498 SMIM5Q71RC9 77 aa24.8■■□□□ 1.56
TFF3-204ENST00000518498 AMIGO3Q86WK7 504 aa24.8■■□□□ 1.56
TFF3-204ENST00000518498 PHKG2P15735 406 aa24.79■■□□□ 1.56
TFF3-204ENST00000518498 SSFA2P28290 1259 aa24.79■■□□□ 1.56
TFF3-204ENST00000518498 ASAP1Q9ULH1 1129 aa24.79■■□□□ 1.56
TFF3-204ENST00000518498 MAP2P11137 1827 aaKnown RBP24.79■■□□□ 1.56
TFF3-204ENST00000518498 ATP6V1AP38606 617 aa24.78■■□□□ 1.56
TFF3-204ENST00000518498 TNNT2P45379 298 aaPredicted RBP24.78■■□□□ 1.56
TFF3-204ENST00000518498 LINC00116Q8NCU8 138 aa24.78■■□□□ 1.56
TFF3-204ENST00000518498 ANKRD26Q9UPS8 1709 aa24.76■■□□□ 1.55
TFF3-204ENST00000518498 EIF4A2Q14240 407 aaKnown RBP24.76■■□□□ 1.55
TFF3-204ENST00000518498 ITPK1Q13572 414 aa24.75■■□□□ 1.55
TFF3-204ENST00000518498 ATG3Q9NT62 314 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms