RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 TNNT2P45379 298 aaPredicted RBP25.42■■□□□ 1.66
HOXA3-203ENST00000518451 NUP188Q5SRE5 1749 aa25.4■■□□□ 1.66
HOXA3-203ENST00000518451 MEGF6O75095 1541 aa25.39■■□□□ 1.66
HOXA3-203ENST00000518451 MORC1Q86VD1 984 aa25.39■■□□□ 1.66
HOXA3-203ENST00000518451 SYTL4Q96C24 671 aaPredicted RBP25.39■■□□□ 1.66
HOXA3-203ENST00000518451 STK32BQ9NY57 414 aa25.39■■□□□ 1.66
HOXA3-203ENST00000518451 PRIM1P49642 420 aaKnown RBP25.38■■□□□ 1.65
HOXA3-203ENST00000518451 KIF7Q2M1P5 1343 aa25.37■■□□□ 1.65
HOXA3-203ENST00000518451 LRP5O75197 1615 aa25.37■■□□□ 1.65
HOXA3-203ENST00000518451 PCDH11XQ9BZA7 1347 aa25.37■■□□□ 1.65
HOXA3-203ENST00000518451 PCDH11YQ9BZA8 1340 aa25.37■■□□□ 1.65
HOXA3-203ENST00000518451 NHSQ6T4R5 1651 aa25.36■■□□□ 1.65
HOXA3-203ENST00000518451 SPON1Q9HCB6 807 aa25.35■■□□□ 1.65
HOXA3-203ENST00000518451 SLC15A2Q16348 729 aa25.34■■□□□ 1.65
HOXA3-203ENST00000518451 EYA1Q99502 592 aa25.34■■□□□ 1.65
HOXA3-203ENST00000518451 ANO8Q9HCE9 1232 aaPredicted RBP25.34■■□□□ 1.65
HOXA3-203ENST00000518451 SPG7Q9UQ90 795 aa25.34■■□□□ 1.65
HOXA3-203ENST00000518451 RGPD2P0DJD1 1756 aa25.33■■□□□ 1.65
HOXA3-203ENST00000518451 SLC27A3Q5K4L6 730 aa25.33■■□□□ 1.65
HOXA3-203ENST00000518451 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.32■■□□□ 1.64
HOXA3-203ENST00000518451 EIF4A2Q14240 407 aaKnown RBP25.31■■□□□ 1.64
HOXA3-203ENST00000518451 KAT6BQ8WYB5 2073 aa25.3■■□□□ 1.64
HOXA3-203ENST00000518451 HMGB2P26583 209 aaKnown RBP25.3■■□□□ 1.64
HOXA3-203ENST00000518451 MAP2P11137 1827 aaKnown RBP25.3■■□□□ 1.64
HOXA3-203ENST00000518451 NCAPD2Q15021 1401 aa25.29■■□□□ 1.64
HOXA3-203ENST00000518451 ANKRD26Q9UPS8 1709 aa25.27■■□□□ 1.64
HOXA3-203ENST00000518451 CYP27B1O15528 508 aa25.27■■□□□ 1.64
HOXA3-203ENST00000518451 AMER1Q5JTC6 1135 aaPredicted RBP25.27■■□□□ 1.64
HOXA3-203ENST00000518451 PPP1R1BQ9UD71 204 aaPredicted RBP25.27■■□□□ 1.64
HOXA3-203ENST00000518451 LRRC4BQ9NT99 713 aa25.26■■□□□ 1.63
HOXA3-203ENST00000518451 BTAF1O14981 1849 aa25.26■■□□□ 1.63
HOXA3-203ENST00000518451 PLEKHG2Q9H7P9 1386 aa25.24■■□□□ 1.63
HOXA3-203ENST00000518451 PER1O15534 1290 aaPredicted RBP25.24■■□□□ 1.63
HOXA3-203ENST00000518451 NKX1-1Q15270 411 aaPredicted RBP25.24■■□□□ 1.63
HOXA3-203ENST00000518451 IFNL2Q8IZJ0 200 aa25.23■■□□□ 1.63
HOXA3-203ENST00000518451 IGSF1Q8N6C5 1336 aa25.22■■□□□ 1.63
HOXA3-203ENST00000518451 MPRIPQ6WCQ1 1025 aa25.22■■□□□ 1.63
HOXA3-203ENST00000518451 CCNL1Q9UK58 526 aaPredicted RBP25.21■■□□□ 1.63
HOXA3-203ENST00000518451 SHANK3Q9BYB0 1731 aa25.2■■□□□ 1.63
HOXA3-203ENST00000518451 ZBTB7AO95365 584 aa25.2■■□□□ 1.62
HOXA3-203ENST00000518451 SMARCC1Q92922 1105 aaPredicted RBP25.2■■□□□ 1.62
HOXA3-203ENST00000518451 PDGFDQ9GZP0 370 aaPredicted RBP25.2■■□□□ 1.62
HOXA3-203ENST00000518451 PLEKHO1Q53GL0 409 aaPredicted RBP25.19■■□□□ 1.62
HOXA3-203ENST00000518451 AKT1S1Q96B36 256 aa25.19■■□□□ 1.62
HOXA3-203ENST00000518451 MTFR1LQ9H019 292 aa25.19■■□□□ 1.62
HOXA3-203ENST00000518451 PHKG2P15735 406 aa25.18■■□□□ 1.62
HOXA3-203ENST00000518451 AMOTQ4VCS5 1084 aa25.18■■□□□ 1.62
HOXA3-203ENST00000518451 TFCP2L1Q9NZI6 479 aa25.18■■□□□ 1.62
HOXA3-203ENST00000518451 DOT1LQ8TEK3 1739 aa25.17■■□□□ 1.62
HOXA3-203ENST00000518451 ZNF827Q17R98 1081 aa25.17■■□□□ 1.62
HOXA3-203ENST00000518451 CC2D1BQ5T0F9 858 aaKnown RBP25.17■■□□□ 1.62
HOXA3-203ENST00000518451 ATF5Q9Y2D1 282 aaPredicted RBP25.17■■□□□ 1.62
HOXA3-203ENST00000518451 HSP90AB1P08238 724 aaKnown RBP25.16■■□□□ 1.62
HOXA3-203ENST00000518451 MTHFSP49914 203 aa25.16■■□□□ 1.62
HOXA3-203ENST00000518451 SLC16A10Q8TF71 515 aa25.16■■□□□ 1.62
HOXA3-203ENST00000518451 KCNQ4P56696 695 aa25.15■■□□□ 1.62
HOXA3-203ENST00000518451 IL13P35225 146 aa25.14■■□□□ 1.62
HOXA3-203ENST00000518451 PIGBQ92521 554 aa25.14■■□□□ 1.62
HOXA3-203ENST00000518451 TMOD3Q9NYL9 352 aa25.14■■□□□ 1.62
HOXA3-203ENST00000518451 NPC1L1Q9UHC9 1359 aa25.14■■□□□ 1.61
HOXA3-203ENST00000518451 PKD1L3Q7Z443 1732 aa25.14■■□□□ 1.61
HOXA3-203ENST00000518451 SULT6B1Q6IMI4 303 aa25.13■■□□□ 1.61
HOXA3-203ENST00000518451 DCAF8L1A6NGE4 600 aa25.12■■□□□ 1.61
HOXA3-203ENST00000518451 PTGER2P43116 358 aa25.12■■□□□ 1.61
HOXA3-203ENST00000518451 PALLDQ8WX93 1383 aa25.12■■□□□ 1.61
HOXA3-203ENST00000518451 CASZ1Q86V15 1759 aa25.12■■□□□ 1.61
HOXA3-203ENST00000518451 PAPPAQ13219 1627 aa25.12■■□□□ 1.61
HOXA3-203ENST00000518451 DCAF5Q96JK2 942 aa25.11■■□□□ 1.61
HOXA3-203ENST00000518451 ERVV-2B6SEH9 535 aa25.1■■□□□ 1.61
HOXA3-203ENST00000518451 C1orf141Q5JVX7 400 aa25.09■■□□□ 1.61
HOXA3-203ENST00000518451 ZNF530Q6P9A1 599 aaPredicted RBP25.09■■□□□ 1.61
HOXA3-203ENST00000518451 DIAPH1O60610 1272 aaKnown RBP25.08■■□□□ 1.61
HOXA3-203ENST00000518451 AEBP1Q8IUX7 1158 aa25.08■■□□□ 1.61
HOXA3-203ENST00000518451 LY75O60449 1722 aa25.08■■□□□ 1.61
HOXA3-203ENST00000518451 PNPLA7Q6ZV29 1317 aa25.08■■□□□ 1.6
HOXA3-203ENST00000518451 FLAD1Q8NFF5 587 aa25.07■■□□□ 1.6
HOXA3-203ENST00000518451 CNGB1Q14028 1251 aaPredicted RBP25.06■■□□□ 1.6
HOXA3-203ENST00000518451 KDRP35968 1356 aa25.05■■□□□ 1.6
HOXA3-203ENST00000518451 MSH5O43196 834 aa25.05■■□□□ 1.6
HOXA3-203ENST00000518451 POLD1P28340 1107 aa25.05■■□□□ 1.6
HOXA3-203ENST00000518451 ARXQ96QS3 562 aa25.05■■□□□ 1.6
HOXA3-203ENST00000518451 SGIP1Q9BQI5 828 aa25.05■■□□□ 1.6
HOXA3-203ENST00000518451 LOC102724428A0A0B4J2F2 783 aa25.03■■□□□ 1.6
HOXA3-203ENST00000518451 SIK1P57059 783 aa25.03■■□□□ 1.6
HOXA3-203ENST00000518451 CABP4P57796 275 aa25.03■■□□□ 1.6
HOXA3-203ENST00000518451 ASAP1Q9ULH1 1129 aa25.03■■□□□ 1.6
HOXA3-203ENST00000518451 AK7Q96M32 723 aa25.01■■□□□ 1.59
HOXA3-203ENST00000518451 ATG3Q9NT62 314 aa25.01■■□□□ 1.59
HOXA3-203ENST00000518451 COL23A1Q86Y22 540 aaPredicted RBP25■■□□□ 1.59
HOXA3-203ENST00000518451 FHDC1Q9C0D6 1143 aaPredicted RBP25■■□□□ 1.59
HOXA3-203ENST00000518451 HMOX1P09601 288 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 ITGB4P16144 1822 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 ATP6V1AP38606 617 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 AKAP4Q5JQC9 854 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 CFAP53Q96M91 514 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 SYT17Q9BSW7 474 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 TOGARAM1Q9Y4F4 1720 aa24.99■■□□□ 1.59
HOXA3-203ENST00000518451 QSER1Q2KHR3 1735 aa24.96■■□□□ 1.59
HOXA3-203ENST00000518451 U2SURPO15042 1029 aaKnown RBP24.95■■□□□ 1.58
HOXA3-203ENST00000518451 NFATC2IPQ8NCF5 419 aa24.95■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms