RNA–Protein interactions for RNA: ENST00000518440.1

MSC-202, Transcript of musculin, humanhuman

TSL 3

Gene MSC, Length 455 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-202ENST00000518440 SLC16A10Q8TF71 515 aa17.12■□□□□ 0.33
MSC-202ENST00000518440 AKT1S1Q96B36 256 aa17.12■□□□□ 0.33
MSC-202ENST00000518440 KAT6BQ8WYB5 2073 aa17.11■□□□□ 0.33
MSC-202ENST00000518440 NBPF6Q5VWK0 638 aa17.11■□□□□ 0.33
MSC-202ENST00000518440 NBPF4Q96M43 638 aa17.11■□□□□ 0.33
MSC-202ENST00000518440 SMG6Q86US8 1419 aaKnown RBP17.11■□□□□ 0.33
MSC-202ENST00000518440 RAPGEF4Q8WZA2 1011 aa17.1■□□□□ 0.33
MSC-202ENST00000518440 MEGF6O75095 1541 aa17.1■□□□□ 0.33
MSC-202ENST00000518440 KIF24Q5T7B8 1368 aa17.09■□□□□ 0.33
MSC-202ENST00000518440 MAP3K5Q99683 1374 aa17.09■□□□□ 0.33
MSC-202ENST00000518440 INSRP06213 1382 aa17.08■□□□□ 0.32
MSC-202ENST00000518440 TATP17735 454 aaPredicted RBP17.08■□□□□ 0.32
MSC-202ENST00000518440 TFCP2L1Q9NZI6 479 aa17.08■□□□□ 0.32
MSC-202ENST00000518440 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
MSC-202ENST00000518440 NSD2O96028 1365 aa17.07■□□□□ 0.32
MSC-202ENST00000518440 FLT4P35916 1363 aa17.07■□□□□ 0.32
MSC-202ENST00000518440 POLD1P28340 1107 aa17.07■□□□□ 0.32
MSC-202ENST00000518440 USHBP1Q8N6Y0 703 aa17.07■□□□□ 0.32
MSC-202ENST00000518440 PNPLA7Q6ZV29 1317 aa17.06■□□□□ 0.32
MSC-202ENST00000518440 HMGB2P26583 209 aaKnown RBP17.06■□□□□ 0.32
MSC-202ENST00000518440 HSP90AB2PQ58FF8 381 aa17.06■□□□□ 0.32
MSC-202ENST00000518440 PCGF6Q9BYE7 350 aa17.06■□□□□ 0.32
MSC-202ENST00000518440 CCNL1Q9UK58 526 aaPredicted RBP17.06■□□□□ 0.32
MSC-202ENST00000518440 KCNQ4P56696 695 aa17.05■□□□□ 0.32
MSC-202ENST00000518440 PCDH11XQ9BZA7 1347 aa17.04■□□□□ 0.32
MSC-202ENST00000518440 PCDH11YQ9BZA8 1340 aa17.04■□□□□ 0.32
MSC-202ENST00000518440 CARD14Q9BXL6 1004 aa17.04■□□□□ 0.32
MSC-202ENST00000518440 RGPD2P0DJD1 1756 aa17.03■□□□□ 0.32
MSC-202ENST00000518440 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
MSC-202ENST00000518440 SHANK3Q9BYB0 1731 aa17.02■□□□□ 0.32
MSC-202ENST00000518440 NSD3Q9BZ95 1437 aa17.02■□□□□ 0.31
MSC-202ENST00000518440 QSER1Q2KHR3 1735 aa17.01■□□□□ 0.31
MSC-202ENST00000518440 CLSPNQ9HAW4 1339 aa17.01■□□□□ 0.31
MSC-202ENST00000518440 LY75O60449 1722 aa17.01■□□□□ 0.31
MSC-202ENST00000518440 GPR162Q16538 588 aa17■□□□□ 0.31
MSC-202ENST00000518440 KLHL34Q8N239 644 aa17■□□□□ 0.31
MSC-202ENST00000518440 ZNF784Q8NCA9 323 aaPredicted RBP17■□□□□ 0.31
MSC-202ENST00000518440 EMILIN1Q9Y6C2 1016 aa17■□□□□ 0.31
MSC-202ENST00000518440 KIF20BQ96Q89 1820 aa16.99■□□□□ 0.31
MSC-202ENST00000518440 CYP27B1O15528 508 aa16.99■□□□□ 0.31
MSC-202ENST00000518440 MSH5O43196 834 aa16.99■□□□□ 0.31
MSC-202ENST00000518440 PPM1GO15355 546 aaPredicted RBP16.98■□□□□ 0.31
MSC-202ENST00000518440 MPRIPQ6WCQ1 1025 aa16.98■□□□□ 0.31
MSC-202ENST00000518440 COL23A1Q86Y22 540 aaPredicted RBP16.98■□□□□ 0.31
MSC-202ENST00000518440 SMARCC1Q92922 1105 aaPredicted RBP16.98■□□□□ 0.31
MSC-202ENST00000518440 WASHC2AQ641Q2 1341 aa16.97■□□□□ 0.31
MSC-202ENST00000518440 FLAD1Q8NFF5 587 aa16.97■□□□□ 0.31
MSC-202ENST00000518440 SPG7Q9UQ90 795 aa16.97■□□□□ 0.31
MSC-202ENST00000518440 PALLDQ8WX93 1383 aa16.97■□□□□ 0.31
MSC-202ENST00000518440 COL24A1Q17RW2 1714 aa16.96■□□□□ 0.3
MSC-202ENST00000518440 NCAPD2Q15021 1401 aa16.96■□□□□ 0.3
MSC-202ENST00000518440 NKX1-1Q15270 411 aaPredicted RBP16.95■□□□□ 0.3
MSC-202ENST00000518440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.95■□□□□ 0.3
MSC-202ENST00000518440 EYA1Q99502 592 aa16.94■□□□□ 0.3
MSC-202ENST00000518440 TUBGCP6Q96RT7 1819 aa16.93■□□□□ 0.3
MSC-202ENST00000518440 UTRNP46939 3433 aa16.93■□□□□ 0.3
MSC-202ENST00000518440 PELP1Q8IZL8 1130 aaKnown RBP16.93■□□□□ 0.3
MSC-202ENST00000518440 POLKQ9UBT6 870 aa16.93■□□□□ 0.3
MSC-202ENST00000518440 NLGN2Q8NFZ4 835 aa16.92■□□□□ 0.3
MSC-202ENST00000518440 PIGBQ92521 554 aa16.92■□□□□ 0.3
MSC-202ENST00000518440 POLR3GLQ9BT43 218 aa16.92■□□□□ 0.3
MSC-202ENST00000518440 MSL1Q68DK7 614 aa16.91■□□□□ 0.3
MSC-202ENST00000518440 AK7Q96M32 723 aa16.91■□□□□ 0.3
MSC-202ENST00000518440 CHD4Q14839 1912 aa16.91■□□□□ 0.3
MSC-202ENST00000518440 GRIN3BO60391 1043 aa16.9■□□□□ 0.3
MSC-202ENST00000518440 ZEB1P37275 1124 aaPredicted RBP16.9■□□□□ 0.3
MSC-202ENST00000518440 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
MSC-202ENST00000518440 PKD1L3Q7Z443 1732 aa16.9■□□□□ 0.3
MSC-202ENST00000518440 C5P01031 1676 aa16.89■□□□□ 0.29
MSC-202ENST00000518440 EIF4G2P78344 907 aaKnown RBP eCLIP16.89■□□□□ 0.29
MSC-202ENST00000518440 TMOD3Q9NYL9 352 aa16.89■□□□□ 0.29
MSC-202ENST00000518440 CD2APQ9Y5K6 639 aa16.89■□□□□ 0.29
MSC-202ENST00000518440 ANKRD26Q9UPS8 1709 aa16.89■□□□□ 0.29
MSC-202ENST00000518440 PLEKHG2Q9H7P9 1386 aa16.89■□□□□ 0.29
MSC-202ENST00000518440 LOC102724428A0A0B4J2F2 783 aa16.88■□□□□ 0.29
MSC-202ENST00000518440 PHKG2P15735 406 aa16.88■□□□□ 0.29
MSC-202ENST00000518440 SIK1P57059 783 aa16.88■□□□□ 0.29
MSC-202ENST00000518440 EIF4A2Q14240 407 aaKnown RBP16.88■□□□□ 0.29
MSC-202ENST00000518440 TNNT2P45379 298 aaPredicted RBP16.87■□□□□ 0.29
MSC-202ENST00000518440 TOGARAM1Q9Y4F4 1720 aa16.87■□□□□ 0.29
MSC-202ENST00000518440 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.86■□□□□ 0.29
MSC-202ENST00000518440 YBX3P16989 372 aaKnown RBP eCLIP16.86■□□□□ 0.29
MSC-202ENST00000518440 SSFA2P28290 1259 aa16.86■□□□□ 0.29
MSC-202ENST00000518440 C4BP0C0L5 1744 aa16.85■□□□□ 0.29
MSC-202ENST00000518440 MAP2P11137 1827 aaKnown RBP16.85■□□□□ 0.29
MSC-202ENST00000518440 C1QTNF8P60827 252 aa16.85■□□□□ 0.29
MSC-202ENST00000518440 PANK3Q9H999 370 aa16.85■□□□□ 0.29
MSC-202ENST00000518440 ASAP1Q9ULH1 1129 aa16.85■□□□□ 0.29
MSC-202ENST00000518440 ITGB4P16144 1822 aa16.84■□□□□ 0.29
MSC-202ENST00000518440 PHF14O94880 888 aa16.84■□□□□ 0.29
MSC-202ENST00000518440 HSP90AB1P08238 724 aaKnown RBP16.84■□□□□ 0.29
MSC-202ENST00000518440 HSPA5P11021 654 aaKnown RBP16.84■□□□□ 0.29
MSC-202ENST00000518440 LINC00116Q8NCU8 138 aa16.84■□□□□ 0.29
MSC-202ENST00000518440 TAF1LQ8IZX4 1826 aa16.84■□□□□ 0.29
MSC-202ENST00000518440 ATP6V1AP38606 617 aa16.83■□□□□ 0.28
MSC-202ENST00000518440 AMIGO3Q86WK7 504 aa16.83■□□□□ 0.28
MSC-202ENST00000518440 IGSF1Q8N6C5 1336 aa16.83■□□□□ 0.28
MSC-202ENST00000518440 ATG3Q9NT62 314 aa16.83■□□□□ 0.28
MSC-202ENST00000518440 ERVV-2B6SEH9 535 aa16.82■□□□□ 0.28
MSC-202ENST00000518440 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms