RNA–Protein interactions for RNA: ENST00000518290.1

ARFGEF1-204, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 2

Gene ARFGEF1, Length 3,179 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-204ENST00000518290 RLBP1P12271 317 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 ATF7IPQ6VMQ6 1270 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 SSH1Q8WYL5 1049 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 EYA1Q99502 592 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 MAP3K5Q99683 1374 aa10.32□□□□□ -0.76
ARFGEF1-204ENST00000518290 GAS2L2Q8NHY3 880 aa10.31□□□□□ -0.76
ARFGEF1-204ENST00000518290 TSR2Q969E8 191 aaKnown RBP10.31□□□□□ -0.76
ARFGEF1-204ENST00000518290 HAP1P54257 671 aaPredicted RBP10.31□□□□□ -0.76
ARFGEF1-204ENST00000518290 ARHGEF25Q86VW2 580 aa10.31□□□□□ -0.76
ARFGEF1-204ENST00000518290 AEBP1Q8IUX7 1158 aa10.31□□□□□ -0.76
ARFGEF1-204ENST00000518290 HMOX1P09601 288 aa10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 TRIM27P14373 513 aa10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 SULT6B1Q6IMI4 303 aa10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 DZIP1LQ8IYY4 767 aaKnown RBP10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 CICQ96RK0 1608 aaPredicted RBP10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 KDM4FA0A1W2PPD8 638 aa10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 HEG1Q9ULI3 1381 aa10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 C5P01031 1676 aa10.3□□□□□ -0.76
ARFGEF1-204ENST00000518290 IPO8O15397 1037 aaKnown RBP10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 MSH5O43196 834 aa10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 NLRP6P59044 892 aa10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 BACH2Q9BYV9 841 aa10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 NEUROD2Q15784 382 aa10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 ZBTB40Q9NUA8 1239 aa10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 DDX19BQ9UMR2 479 aa10.29□□□□□ -0.76
ARFGEF1-204ENST00000518290 ABTB2Q8N961 1025 aa10.28□□□□□ -0.76
ARFGEF1-204ENST00000518290 MTHFSDQ2M296 383 aaKnown RBP10.28□□□□□ -0.76
ARFGEF1-204ENST00000518290 PTPRCP08575 1304 aa10.28□□□□□ -0.76
ARFGEF1-204ENST00000518290 LRP6O75581 1613 aa10.28□□□□□ -0.76
ARFGEF1-204ENST00000518290 PANK1Q8TE04 598 aa10.28□□□□□ -0.76
ARFGEF1-204ENST00000518290 LTBP4Q8N2S1 1624 aa10.27□□□□□ -0.76
ARFGEF1-204ENST00000518290 CHMP4BQ9H444 224 aaKnown RBP10.27□□□□□ -0.77
ARFGEF1-204ENST00000518290 SMC4Q9NTJ3 1288 aa10.27□□□□□ -0.77
ARFGEF1-204ENST00000518290 COL14A1Q05707 1796 aaKnown RBP10.27□□□□□ -0.77
ARFGEF1-204ENST00000518290 IGHDP01880 384 aa10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 ANO8Q9HCE9 1232 aaPredicted RBP10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 ATP10DQ9P241 1426 aa10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 HOXB7P09629 217 aa10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 INTS3Q68E01 1043 aaKnown RBP10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 CADPS2Q86UW7 1296 aa10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 NOB1Q9ULX3 412 aaKnown RBP10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 COL16A1Q07092 1604 aaPredicted RBP10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 NRAPQ86VF7 1730 aa10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 PROSER2Q86WR7 435 aaPredicted RBP10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 PCDHB15Q9Y5E8 787 aa10.26□□□□□ -0.77
ARFGEF1-204ENST00000518290 PPM1GO15355 546 aaPredicted RBP10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 AMPHP49418 695 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 PSME1Q06323 249 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 TWISTNBQ3B726 338 aaPredicted RBP10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 ESCO1Q5FWF5 840 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 SMC5Q8IY18 1101 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 COG6Q9Y2V7 657 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 SOS2Q07890 1332 aaPredicted RBP10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 TSPYL6Q8N831 410 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 C8orf58Q8NAV2 365 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 ORAI2Q96SN7 254 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 SPATA31A3Q5VYP0 1347 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 NPHP3Q7Z494 1330 aa10.25□□□□□ -0.77
ARFGEF1-204ENST00000518290 NUTM2FA1L443 756 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 GCP02774 474 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 TNNQ9UQP3 1299 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 GNAT3A8MTJ3 354 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 ZBTB7BO15156 539 aaPredicted RBP10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 C8orf34Q49A92 452 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 NUP188Q5SRE5 1749 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 KRT28Q7Z3Y7 464 aa10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 API5Q9BZZ5 524 aaKnown RBP10.24□□□□□ -0.77
ARFGEF1-204ENST00000518290 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.24□□□□□ -0.773e-6■■□□□ 13.5
ARFGEF1-204ENST00000518290 TOGARAM1Q9Y4F4 1720 aa10.23□□□□□ -0.77
ARFGEF1-204ENST00000518290 FAM83GA6ND36 823 aa10.23□□□□□ -0.77
ARFGEF1-204ENST00000518290 ERBB3P21860 1342 aa10.23□□□□□ -0.77
ARFGEF1-204ENST00000518290 PDE4AP27815 886 aa10.23□□□□□ -0.77
ARFGEF1-204ENST00000518290 AMOTQ4VCS5 1084 aa10.23□□□□□ -0.77
ARFGEF1-204ENST00000518290 RWDD1Q9H446 243 aaPredicted RBP10.23□□□□□ -0.77
ARFGEF1-204ENST00000518290 TMEM57Q8N5G2 664 aa10.22□□□□□ -0.77
ARFGEF1-204ENST00000518290 ROBO1Q9Y6N7 1651 aa10.22□□□□□ -0.77
ARFGEF1-204ENST00000518290 THUMPD2Q9BTF0 503 aaKnown RBP10.22□□□□□ -0.77
ARFGEF1-204ENST00000518290 NWD2Q9ULI1 1742 aa10.22□□□□□ -0.77
ARFGEF1-204ENST00000518290 AKAP4Q5JQC9 854 aa10.22□□□□□ -0.77
ARFGEF1-204ENST00000518290 ZNF831Q5JPB2 1677 aa10.21□□□□□ -0.77
ARFGEF1-204ENST00000518290 NBPF6Q5VWK0 638 aa10.21□□□□□ -0.77
ARFGEF1-204ENST00000518290 NBPF4Q96M43 638 aa10.21□□□□□ -0.77
ARFGEF1-204ENST00000518290 MEGF6O75095 1541 aa10.21□□□□□ -0.78
ARFGEF1-204ENST00000518290 COL5A2P05997 1499 aaPredicted RBP10.21□□□□□ -0.78
ARFGEF1-204ENST00000518290 FAM161AQ3B820 660 aa10.21□□□□□ -0.78
ARFGEF1-204ENST00000518290 IL17REQ8NFR9 667 aa10.21□□□□□ -0.78
ARFGEF1-204ENST00000518290 CANXP27824 592 aaKnown RBP10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 FTSJ3Q8IY81 847 aaKnown RBP10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 RREB1Q92766 1687 aa10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 KDM6AO15550 1401 aaPredicted RBP10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 FRAT1Q92837 279 aaPredicted RBP10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 ARFGEF2Q9Y6D5 1785 aa10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 ATF3P18847 181 aa10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 MCM10Q7L590 875 aa10.2□□□□□ -0.78
ARFGEF1-204ENST00000518290 BRINP3Q76B58 766 aa10.19□□□□□ -0.78
ARFGEF1-204ENST00000518290 BCL2L13Q9BXK5 485 aa10.19□□□□□ -0.78
ARFGEF1-204ENST00000518290 FOXO3O43524 673 aa10.18□□□□□ -0.78
ARFGEF1-204ENST00000518290 NUCB1Q02818 461 aa10.18□□□□□ -0.78
ARFGEF1-204ENST00000518290 DCTN1Q14203 1278 aa10.18□□□□□ -0.78
ARFGEF1-204ENST00000518290 TAF7Q15545 349 aaPredicted RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms