RNA–Protein interactions for RNA: ENST00000518265.5

SRGAP3-211, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 1,799 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-211ENST00000518265 PSME1Q06323 249 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 MORC1Q86VD1 984 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 SLAIN2Q9P270 581 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 DCCP43146 1447 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 BRINP3Q76B58 766 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 EMILIN3Q9NT22 766 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 NCOA3Q9Y6Q9 1424 aa10.75□□□□□ -0.69
SRGAP3-211ENST00000518265 ALS2Q96Q42 1657 aa10.74□□□□□ -0.69
SRGAP3-211ENST00000518265 MAP3K13O43283 966 aa10.74□□□□□ -0.69
SRGAP3-211ENST00000518265 PPP2R1AP30153 589 aa10.74□□□□□ -0.69
SRGAP3-211ENST00000518265 PIP4K2BP78356 416 aa10.74□□□□□ -0.69
SRGAP3-211ENST00000518265 DHX37Q8IY37 1157 aaKnown RBP10.74□□□□□ -0.69
SRGAP3-211ENST00000518265 NHSL1Q5SYE7 1610 aa10.74□□□□□ -0.69
SRGAP3-211ENST00000518265 SSH2Q76I76 1423 aa10.73□□□□□ -0.69
SRGAP3-211ENST00000518265 KRT28Q7Z3Y7 464 aa10.73□□□□□ -0.69
SRGAP3-211ENST00000518265 MRS2Q9HD23 443 aa10.73□□□□□ -0.69
SRGAP3-211ENST00000518265 MYBBP1AQ9BQG0 1328 aaKnown RBP10.73□□□□□ -0.69
SRGAP3-211ENST00000518265 FARP1Q9Y4F1 1045 aaPredicted RBP10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 RGPD2P0DJD1 1756 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 PHLPP1O60346 1717 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 PEAK1Q9H792 1746 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 RALBP1Q15311 655 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 PPP1R15BQ5SWA1 713 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 FAM9BQ8IZU0 186 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 ABTB2Q8N961 1025 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 SHPRHQ149N8 1683 aa10.72□□□□□ -0.69
SRGAP3-211ENST00000518265 A6NJR5 290 aa10.71□□□□□ -0.69
SRGAP3-211ENST00000518265 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.69
SRGAP3-211ENST00000518265 RRS1Q15050 365 aaKnown RBP10.71□□□□□ -0.69
SRGAP3-211ENST00000518265 PXDNQ92626 1479 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 CRYBG1Q9Y4K1 1723 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 PHRF1Q9P1Y6 1649 aaKnown RBP10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 NPC1L1Q9UHC9 1359 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 PDIA6Q15084 440 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 AMHR2Q16671 573 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 CABLES1Q8TDN4 633 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 COG3Q96JB2 828 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 EMILIN1Q9Y6C2 1016 aa10.7□□□□□ -0.7
SRGAP3-211ENST00000518265 USP54Q70EL1 1684 aa10.69□□□□□ -0.7
SRGAP3-211ENST00000518265 ABCA3Q99758 1704 aa10.69□□□□□ -0.7
SRGAP3-211ENST00000518265 MTHFSP49914 203 aa10.69□□□□□ -0.7
SRGAP3-211ENST00000518265 OVOS2A0A0J9YW53 1432 aa10.69□□□□□ -0.7
SRGAP3-211ENST00000518265 OVOS2Q6IE36 1432 aa10.69□□□□□ -0.7
SRGAP3-211ENST00000518265 MED1Q15648 1581 aaPredicted RBP10.68□□□□□ -0.7
SRGAP3-211ENST00000518265 UBAP1LF5GYI3 381 aa10.68□□□□□ -0.7
SRGAP3-211ENST00000518265 CCER2I3L3R5 266 aa10.68□□□□□ -0.7
SRGAP3-211ENST00000518265 IRF6O14896 467 aa10.68□□□□□ -0.7
SRGAP3-211ENST00000518265 MAP2K5Q13163 448 aa10.68□□□□□ -0.7
SRGAP3-211ENST00000518265 NSD2O96028 1365 aa10.68□□□□□ -0.7
SRGAP3-211ENST00000518265 FECHP22830 423 aa10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 KCTD17Q8N5Z5 321 aa10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 CERKQ8TCT0 537 aa10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 TTC21AQ8NDW8 1320 aa10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 CDK11BP21127 795 aaKnown RBP10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 NLRP13Q86W25 1043 aa10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 NPHP3Q7Z494 1330 aa10.67□□□□□ -0.7
SRGAP3-211ENST00000518265 MCM6Q14566 821 aa10.66□□□□□ -0.7
SRGAP3-211ENST00000518265 ERICH6BQ5W0A0 696 aa10.66□□□□□ -0.7
SRGAP3-211ENST00000518265 KIF12Q96FN5 646 aa10.66□□□□□ -0.7
SRGAP3-211ENST00000518265 POLKQ9UBT6 870 aa10.66□□□□□ -0.7
SRGAP3-211ENST00000518265 BRD4O60885 1362 aaPredicted RBP10.65□□□□□ -0.7
SRGAP3-211ENST00000518265 TNS3Q68CZ2 1445 aa10.65□□□□□ -0.7
SRGAP3-211ENST00000518265 NFAT5O94916 1531 aa10.64□□□□□ -0.71
SRGAP3-211ENST00000518265 COL16A1Q07092 1604 aaPredicted RBP10.64□□□□□ -0.71
SRGAP3-211ENST00000518265 ZC3H6P61129 1189 aaKnown RBP10.64□□□□□ -0.71
SRGAP3-211ENST00000518265 TOM1O60784 492 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 MS4A1P11836 297 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 TTLL12Q14166 644 aaPredicted RBP10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 PNISRQ8TF01 805 aaKnown RBP10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 POM121Q96HA1 1249 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 GOPCQ9HD26 462 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 GPHNQ9NQX3 736 aaPredicted RBP10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 SPATA31A3Q5VYP0 1347 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 USP31Q70CQ4 1352 aa10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 COL3A1P02461 1466 aaPredicted RBP10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 AHDC1Q5TGY3 1603 aaPredicted RBP10.63□□□□□ -0.71
SRGAP3-211ENST00000518265 SLIT3O75094 1523 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 SOS2Q07890 1332 aaPredicted RBP10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 AAMPQ13685 434 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 MAP3K19Q56UN5 1328 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 HSP90AB2PQ58FF8 381 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 LTV1Q96GA3 475 aaPredicted RBP10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 SALL2Q9Y467 1007 aaPredicted RBP10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 DLG5Q8TDM6 1919 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 GRXCR2A6NFK2 248 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 SPDYE16A6NNV3 312 aaPredicted RBP10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 HSP90B1P14625 803 aaKnown RBP10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 ADAMTS8Q9UP79 889 aa10.62□□□□□ -0.71
SRGAP3-211ENST00000518265 COL18A1P39060 1754 aa10.61□□□□□ -0.71
SRGAP3-211ENST00000518265 SBNO1A3KN83 1393 aa10.61□□□□□ -0.71
SRGAP3-211ENST00000518265 GCP02774 474 aa10.61□□□□□ -0.71
SRGAP3-211ENST00000518265 DSG2Q14126 1118 aa10.61□□□□□ -0.71
SRGAP3-211ENST00000518265 CHRNA2Q15822 529 aa10.61□□□□□ -0.71
SRGAP3-211ENST00000518265 U2SURPO15042 1029 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-211ENST00000518265 AMPHP49418 695 aa10.6□□□□□ -0.71
SRGAP3-211ENST00000518265 AEBP1Q8IUX7 1158 aa10.6□□□□□ -0.71
SRGAP3-211ENST00000518265 WDR43Q15061 677 aaKnown RBP eCLIP10.6□□□□□ -0.71
SRGAP3-211ENST00000518265 REPIN1Q9BWE0 567 aaKnown RBP10.6□□□□□ -0.71
SRGAP3-211ENST00000518265 VIRMAQ69YN4 1812 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms