RNA–Protein interactions for RNA: ENST00000518230.5

ARFGEF1-203, Transcript of ADP ribosylation factor guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene ARFGEF1, Length 2,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGEF1-203ENST00000518230 MED14O60244 1454 aa11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 KIF13AQ9H1H9 1805 aa11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 SMARCA5O60264 1052 aaPredicted RBP11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 TTC22Q5TAA0 569 aa11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 FOXD4L6Q3SYB3 417 aaPredicted RBP11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 FOXD4L3Q6VB84 417 aaPredicted RBP11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 COL3A1P02461 1466 aaPredicted RBP11.98□□□□□ -0.49
ARFGEF1-203ENST00000518230 DYNC1I1O14576 645 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 CDK19Q9BWU1 502 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 RIMS2Q9UQ26 1411 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 SDSP20132 328 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 CSPP1Q1MSJ5 1256 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 CWC22Q9HCG8 908 aaKnown RBP11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 CCDC39Q9UFE4 941 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 ARHGEF40Q8TER5 1519 aa11.97□□□□□ -0.49
ARFGEF1-203ENST00000518230 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 BRPF1P55201 1214 aaPredicted RBP11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 SASS6Q6UVJ0 657 aa11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 WAPLQ7Z5K2 1190 aa11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 ZNF830Q96NB3 372 aaPredicted RBP11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 ST18O60284 1047 aa11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 C8orf58Q8NAV2 365 aa11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 ARHGAP45Q92619 1136 aa11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 ZHX1Q9UKY1 873 aaPredicted RBP11.96□□□□□ -0.49
ARFGEF1-203ENST00000518230 CD163L1Q9NR16 1453 aa11.96□□□□□ -0.5
ARFGEF1-203ENST00000518230 INTS3Q68E01 1043 aaKnown RBP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 DCTPP1Q9H773 170 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 MBIPQ9NS73 344 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 FCHSD2O94868 740 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 TPRNQ4KMQ1 711 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 DNTTIP2Q5QJE6 756 aaKnown RBP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 ABCC4O15439 1325 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 TWISTNBQ3B726 338 aaPredicted RBP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 NOL8Q76FK4 1167 aaKnown RBP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 ESF1Q9H501 851 aaKnown RBP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 CABP1Q9NZU7 370 aa11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.95□□□□□ -0.5
ARFGEF1-203ENST00000518230 FAM177BA6PVY3 158 aa11.94□□□□□ -0.5
ARFGEF1-203ENST00000518230 MCM5P33992 734 aa11.94□□□□□ -0.5
ARFGEF1-203ENST00000518230 ZNF428Q96B54 188 aa11.94□□□□□ -0.5
ARFGEF1-203ENST00000518230 PIK3R4Q99570 1358 aa11.94□□□□□ -0.5
ARFGEF1-203ENST00000518230 PTCH1Q13635 1447 aa11.94□□□□□ -0.5
ARFGEF1-203ENST00000518230 NEK4P51957 841 aa11.93□□□□□ -0.5
ARFGEF1-203ENST00000518230 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.93□□□□□ -0.5
ARFGEF1-203ENST00000518230 C17orf53Q8N3J3 647 aaPredicted RBP11.93□□□□□ -0.5
ARFGEF1-203ENST00000518230 GDPD2Q9HCC8 539 aa11.93□□□□□ -0.5
ARFGEF1-203ENST00000518230 FAM83GA6ND36 823 aa11.93□□□□□ -0.5
ARFGEF1-203ENST00000518230 SMAP1Q8IYB5 467 aaPredicted RBP11.93□□□□□ -0.5
ARFGEF1-203ENST00000518230 METP08581 1390 aa11.92□□□□□ -0.5
ARFGEF1-203ENST00000518230 TMX3Q96JJ7 454 aa11.92□□□□□ -0.5
ARFGEF1-203ENST00000518230 KNDC1Q76NI1 1749 aa11.92□□□□□ -0.5
ARFGEF1-203ENST00000518230 DCTN1Q14203 1278 aa11.92□□□□□ -0.5
ARFGEF1-203ENST00000518230 NFE2L2Q16236 605 aa11.92□□□□□ -0.5
ARFGEF1-203ENST00000518230 PODXL2Q9NZ53 605 aa11.92□□□□□ -0.5
ARFGEF1-203ENST00000518230 GADD45BO75293 160 aaPredicted RBP11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 GNAI1P63096 354 aa11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 KIAA2012Q0VF49 1180 aa11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 MTERF4Q7Z6M4 381 aaKnown RBP11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 TSPY26PQ9H489 355 aa11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 DLC1Q96QB1 1528 aa11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 HDGFL2Q7Z4V5 671 aaPredicted RBP11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 LRRC7Q96NW7 1537 aa11.91□□□□□ -0.5
ARFGEF1-203ENST00000518230 SETD1AO15047 1707 aaKnown RBP11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 KRT24Q2M2I5 525 aa11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 CASC1Q6TDU7 716 aa11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 CCDC94Q9BW85 323 aaPredicted RBP11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 API5Q9BZZ5 524 aaKnown RBP11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 POLKQ9UBT6 870 aa11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 TTC12Q9H892 705 aaPredicted RBP11.9□□□□□ -0.5
ARFGEF1-203ENST00000518230 PNPLA6Q8IY17 1366 aa11.9□□□□□ -0.51
ARFGEF1-203ENST00000518230 MBD3O95983 291 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 CBX1P83916 185 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 TXNDC2Q86VQ3 553 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 ZNF710Q8N1W2 664 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 MYRIPQ8NFW9 859 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 IFT57Q9NWB7 429 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 TNRQ92752 1358 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 NRXN3Q9Y4C0 1643 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 ERC2O15083 957 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 REC8O95072 547 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 ZNF853P0CG23 659 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 TCHHQ07283 1943 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 FAM135BQ49AJ0 1406 aa11.89□□□□□ -0.51
ARFGEF1-203ENST00000518230 BRD1O95696 1058 aa11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 CEP85Q6P2H3 762 aa11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 USP25Q9UHP3 1055 aa11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 A0A0U1RQG5 324 aaPredicted RBP11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 CFAP44Q96MT7 982 aa11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 PALD1Q9ULE6 856 aa11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 EMILIN1Q9Y6C2 1016 aa11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 WASLO00401 505 aaPredicted RBP11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 ZSCAN20P17040 1043 aaPredicted RBP11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 HDGFP51858 240 aaKnown RBP11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 NOLC1Q14978 699 aaKnown RBP eCLIP11.88□□□□□ -0.51
ARFGEF1-203ENST00000518230 MEIS3Q99687 375 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms