RNA–Protein interactions for RNA: ENST00000517904.1

CTNNA1-205, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-205ENST00000517904 ANKRD36BQ8N2N9 1353 aa16.18■□□□□ 0.18
CTNNA1-205ENST00000517904 GIGYF1O75420 1035 aaPredicted RBP16.18■□□□□ 0.18
CTNNA1-205ENST00000517904 HDGFL2Q7Z4V5 671 aaPredicted RBP16.18■□□□□ 0.18
CTNNA1-205ENST00000517904 SYTL4Q96C24 671 aaPredicted RBP16.18■□□□□ 0.18
CTNNA1-205ENST00000517904 LTV1Q96GA3 475 aaPredicted RBP16.18■□□□□ 0.18
CTNNA1-205ENST00000517904 PRIM1P49642 420 aaKnown RBP16.17■□□□□ 0.18
CTNNA1-205ENST00000517904 RGPD2P0DJD1 1756 aa16.17■□□□□ 0.18
CTNNA1-205ENST00000517904 MEGF6O75095 1541 aa16.15■□□□□ 0.18
CTNNA1-205ENST00000517904 YBX3P16989 372 aaKnown RBP eCLIP16.15■□□□□ 0.18
CTNNA1-205ENST00000517904 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
CTNNA1-205ENST00000517904 TERF2IPQ9NYB0 399 aa16.14■□□□□ 0.17
CTNNA1-205ENST00000517904 MAP3K19Q56UN5 1328 aa16.14■□□□□ 0.17
CTNNA1-205ENST00000517904 FBLN1P23142 703 aa16.13■□□□□ 0.17
CTNNA1-205ENST00000517904 HOXC9P31274 260 aa16.13■□□□□ 0.17
CTNNA1-205ENST00000517904 CCNL1Q9UK58 526 aaPredicted RBP16.13■□□□□ 0.17
CTNNA1-205ENST00000517904 COL23A1Q86Y22 540 aaPredicted RBP16.12■□□□□ 0.17
CTNNA1-205ENST00000517904 ZCRB1Q8TBF4 217 aaKnown RBP16.12■□□□□ 0.17
CTNNA1-205ENST00000517904 MSL1Q68DK7 614 aa16.1■□□□□ 0.17
CTNNA1-205ENST00000517904 C5P01031 1676 aa16.09■□□□□ 0.17
CTNNA1-205ENST00000517904 MSH5O43196 834 aa16.09■□□□□ 0.17
CTNNA1-205ENST00000517904 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
CTNNA1-205ENST00000517904 IFFO2Q5TF58 517 aa16.09■□□□□ 0.17
CTNNA1-205ENST00000517904 COG3Q96JB2 828 aa16.09■□□□□ 0.17
CTNNA1-205ENST00000517904 PUS7Q96PZ0 661 aaKnown RBP16.09■□□□□ 0.17
CTNNA1-205ENST00000517904 AMPHP49418 695 aa16.08■□□□□ 0.16
CTNNA1-205ENST00000517904 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
CTNNA1-205ENST00000517904 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
CTNNA1-205ENST00000517904 USP47Q96K76 1375 aa16.08■□□□□ 0.16
CTNNA1-205ENST00000517904 ATP10DQ9P241 1426 aa16.08■□□□□ 0.16
CTNNA1-205ENST00000517904 USHBP1Q8N6Y0 703 aa16.07■□□□□ 0.16
CTNNA1-205ENST00000517904 TAF1LQ8IZX4 1826 aa16.06■□□□□ 0.16
CTNNA1-205ENST00000517904 TESK2Q96S53 571 aa16.06■□□□□ 0.16
CTNNA1-205ENST00000517904 RTL1A6NKG5 1358 aa16.05■□□□□ 0.16
CTNNA1-205ENST00000517904 RRS1Q15050 365 aaKnown RBP16.05■□□□□ 0.16
CTNNA1-205ENST00000517904 CD2APQ9Y5K6 639 aa16.04■□□□□ 0.16
CTNNA1-205ENST00000517904 ADCY9O60503 1353 aa16.03■□□□□ 0.16
CTNNA1-205ENST00000517904 TOGARAM1Q9Y4F4 1720 aa16.03■□□□□ 0.16
CTNNA1-205ENST00000517904 CGNL1Q0VF96 1302 aa16.03■□□□□ 0.16
CTNNA1-205ENST00000517904 PALLDQ8WX93 1383 aa16.02■□□□□ 0.16
CTNNA1-205ENST00000517904 AMIGO3Q86WK7 504 aa16.02■□□□□ 0.16
CTNNA1-205ENST00000517904 RAPGEF4Q8WZA2 1011 aa16.02■□□□□ 0.16
CTNNA1-205ENST00000517904 ST20-MTHFSA0A0A6YYL1 179 aa16.01■□□□□ 0.15
CTNNA1-205ENST00000517904 GPBP1L1Q9HC44 474 aaPredicted RBP16.01■□□□□ 0.15
CTNNA1-205ENST00000517904 C4BP0C0L5 1744 aa16.01■□□□□ 0.15
CTNNA1-205ENST00000517904 PCDH11XQ9BZA7 1347 aa16■□□□□ 0.15
CTNNA1-205ENST00000517904 PCDH11YQ9BZA8 1340 aa16■□□□□ 0.15
CTNNA1-205ENST00000517904 FYB1O15117 783 aa16■□□□□ 0.15
CTNNA1-205ENST00000517904 TATP17735 454 aaPredicted RBP16■□□□□ 0.15
CTNNA1-205ENST00000517904 PIAS4Q8N2W9 510 aaPredicted RBP16■□□□□ 0.15
CTNNA1-205ENST00000517904 FLAD1Q8NFF5 587 aa16■□□□□ 0.15
CTNNA1-205ENST00000517904 GGNBP2Q9H3C7 697 aa16■□□□□ 0.15
CTNNA1-205ENST00000517904 ITGB4P16144 1822 aa16■□□□□ 0.15
CTNNA1-205ENST00000517904 SMG6Q86US8 1419 aaKnown RBP16■□□□□ 0.15
CTNNA1-205ENST00000517904 UBR3Q6ZT12 1888 aa15.99■□□□□ 0.15
CTNNA1-205ENST00000517904 CYP27B1O15528 508 aa15.99■□□□□ 0.15
CTNNA1-205ENST00000517904 HSP90AB2PQ58FF8 381 aa15.99■□□□□ 0.15
CTNNA1-205ENST00000517904 MPRIPQ6WCQ1 1025 aa15.99■□□□□ 0.15
CTNNA1-205ENST00000517904 SMIM5Q71RC9 77 aa15.99■□□□□ 0.15
CTNNA1-205ENST00000517904 ZNF526Q8TF50 670 aaPredicted RBP15.99■□□□□ 0.15
CTNNA1-205ENST00000517904 WWC3Q9ULE0 1092 aa15.98■□□□□ 0.15
CTNNA1-205ENST00000517904 INSRP06213 1382 aa15.98■□□□□ 0.15
CTNNA1-205ENST00000517904 TONSLQ96HA7 1378 aa15.98■□□□□ 0.15
CTNNA1-205ENST00000517904 IGSF1Q8N6C5 1336 aa15.97■□□□□ 0.15
CTNNA1-205ENST00000517904 HSPA6P17066 643 aa15.97■□□□□ 0.15
CTNNA1-205ENST00000517904 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
CTNNA1-205ENST00000517904 PHF14O94880 888 aa15.96■□□□□ 0.15
CTNNA1-205ENST00000517904 AK7Q96M32 723 aa15.96■□□□□ 0.15
CTNNA1-205ENST00000517904 MAP2P11137 1827 aaKnown RBP15.96■□□□□ 0.14
CTNNA1-205ENST00000517904 KIF20BQ96Q89 1820 aa15.95■□□□□ 0.14
CTNNA1-205ENST00000517904 FLT4P35916 1363 aa15.95■□□□□ 0.14
CTNNA1-205ENST00000517904 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.94■□□□□ 0.14
CTNNA1-205ENST00000517904 PIGBQ92521 554 aa15.94■□□□□ 0.14
CTNNA1-205ENST00000517904 HMGB2P26583 209 aaKnown RBP15.93■□□□□ 0.14
CTNNA1-205ENST00000517904 SMARCC1Q92922 1105 aaPredicted RBP15.93■□□□□ 0.14
CTNNA1-205ENST00000517904 KIF24Q5T7B8 1368 aa15.92■□□□□ 0.14
CTNNA1-205ENST00000517904 LINC00116Q8NCU8 138 aa15.92■□□□□ 0.14
CTNNA1-205ENST00000517904 NCAPD2Q15021 1401 aa15.92■□□□□ 0.14
CTNNA1-205ENST00000517904 NSD3Q9BZ95 1437 aa15.92■□□□□ 0.14
CTNNA1-205ENST00000517904 CICQ96RK0 1608 aaPredicted RBP15.91■□□□□ 0.14
CTNNA1-205ENST00000517904 KIF3CO14782 793 aa15.91■□□□□ 0.14
CTNNA1-205ENST00000517904 SLC24A1O60721 1099 aa15.91■□□□□ 0.14
CTNNA1-205ENST00000517904 SSFA2P28290 1259 aa15.91■□□□□ 0.14
CTNNA1-205ENST00000517904 NKX1-1Q15270 411 aaPredicted RBP15.91■□□□□ 0.14
CTNNA1-205ENST00000517904 EMILIN1Q9Y6C2 1016 aa15.91■□□□□ 0.14
CTNNA1-205ENST00000517904 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
CTNNA1-205ENST00000517904 SIK1P57059 783 aa15.9■□□□□ 0.14
CTNNA1-205ENST00000517904 KIAA1551Q9HCM1 1747 aa15.9■□□□□ 0.14
CTNNA1-205ENST00000517904 ITPK1Q13572 414 aa15.89■□□□□ 0.13
CTNNA1-205ENST00000517904 ANKRD26Q9UPS8 1709 aa15.88■□□□□ 0.13
CTNNA1-205ENST00000517904 PCNTO95613 3336 aa15.88■□□□□ 0.13
CTNNA1-205ENST00000517904 TMF1P82094 1093 aa15.88■□□□□ 0.13
CTNNA1-205ENST00000517904 KIF13BQ9NQT8 1826 aa15.88■□□□□ 0.13
CTNNA1-205ENST00000517904 PXDNLA1KZ92 1463 aa15.88■□□□□ 0.13
CTNNA1-205ENST00000517904 GNPATO15228 680 aa15.87■□□□□ 0.13
CTNNA1-205ENST00000517904 CARD14Q9BXL6 1004 aa15.87■□□□□ 0.13
CTNNA1-205ENST00000517904 ASAP1Q9ULH1 1129 aa15.87■□□□□ 0.13
CTNNA1-205ENST00000517904 N4BP2Q86UW6 1770 aaPredicted RBP15.86■□□□□ 0.13
CTNNA1-205ENST00000517904 MMP10P09238 476 aa15.86■□□□□ 0.13
CTNNA1-205ENST00000517904 TMOD3Q9NYL9 352 aa15.86■□□□□ 0.13
CTNNA1-205ENST00000517904 SPG7Q9UQ90 795 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms