RNA–Protein interactions for RNA: ENST00000517790.1

PVT1-205, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 599 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-205ENST00000517790 RRBP1Q9P2E9 1410 aaKnown RBP7.41□□□□□ -1.22
PVT1-205ENST00000517790 KNDC1Q76NI1 1749 aa7.41□□□□□ -1.22
PVT1-205ENST00000517790 CENPBP07199 599 aaPredicted RBP7.4□□□□□ -1.22
PVT1-205ENST00000517790 PDE3BQ13370 1112 aa7.4□□□□□ -1.22
PVT1-205ENST00000517790 SAFB2Q14151 953 aaKnown RBP eCLIP7.4□□□□□ -1.22
PVT1-205ENST00000517790 PARP9Q8IXQ6 854 aa7.4□□□□□ -1.22
PVT1-205ENST00000517790 CWC22Q9HCG8 908 aaKnown RBP7.4□□□□□ -1.22
PVT1-205ENST00000517790 MINK1Q8N4C8 1332 aaPredicted RBP7.4□□□□□ -1.22
PVT1-205ENST00000517790 ABCC11Q96J66 1382 aa7.4□□□□□ -1.22
PVT1-205ENST00000517790 KIAA0232Q92628 1395 aa7.39□□□□□ -1.23
PVT1-205ENST00000517790 RPGRIP1LQ68CZ1 1315 aa7.39□□□□□ -1.23
PVT1-205ENST00000517790 MLLT3P42568 568 aaPredicted RBP7.39□□□□□ -1.23
PVT1-205ENST00000517790 SBF2Q86WG5 1849 aa7.38□□□□□ -1.23
PVT1-205ENST00000517790 SND1Q7KZF4 910 aaKnown RBP eCLIP7.38□□□□□ -1.23
PVT1-205ENST00000517790 YTHDC2Q9H6S0 1430 aaKnown RBP7.37□□□□□ -1.23
PVT1-205ENST00000517790 RBM47A0AV96 593 aaKnown RBP7.37□□□□□ -1.23
PVT1-205ENST00000517790 GPR37O15354 613 aa7.37□□□□□ -1.23
PVT1-205ENST00000517790 ZC3H6P61129 1189 aaKnown RBP7.37□□□□□ -1.23
PVT1-205ENST00000517790 LARP1Q6PKG0 1096 aaKnown RBP7.37□□□□□ -1.23
PVT1-205ENST00000517790 MFRPQ9BY79 579 aa7.37□□□□□ -1.23
PVT1-205ENST00000517790 SHANK3Q9BYB0 1731 aa7.37□□□□□ -1.23
PVT1-205ENST00000517790 PEAK1Q9H792 1746 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 PAK3O75914 559 aaPredicted RBP7.36□□□□□ -1.23
PVT1-205ENST00000517790 NEFLP07196 543 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 RGL3Q3MIN7 710 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 TAF7LQ5H9L4 462 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 NUTM2GQ5VZR2 741 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 USTQ9Y2C2 406 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 DLC1Q96QB1 1528 aa7.36□□□□□ -1.23
PVT1-205ENST00000517790 SSH2Q76I76 1423 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 PRR36Q9H6K5 1346 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 EVA1CP58658 441 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 MFSD10Q14728 455 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 GPR162Q16538 588 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 SPATA32Q96LK8 384 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 PRAM1Q96QH2 718 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 HIRIP3Q9BW71 556 aaPredicted RBP7.35□□□□□ -1.23
PVT1-205ENST00000517790 COG6Q9Y2V7 657 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 ZNF330Q9Y3S2 320 aaPredicted RBP7.35□□□□□ -1.23
PVT1-205ENST00000517790 RGPD3A6NKT7 1758 aaPredicted RBP7.35□□□□□ -1.23
PVT1-205ENST00000517790 RGPD4Q7Z3J3 1758 aa7.35□□□□□ -1.23
PVT1-205ENST00000517790 GPRASP1Q5JY77 1395 aa7.34□□□□□ -1.23
PVT1-205ENST00000517790 PHRF1Q9P1Y6 1649 aaKnown RBP7.34□□□□□ -1.23
PVT1-205ENST00000517790 PLSCR1O15162 318 aa7.34□□□□□ -1.23
PVT1-205ENST00000517790 CAMK2BQ13554 666 aa7.34□□□□□ -1.23
PVT1-205ENST00000517790 CERS3Q8IU89 383 aa7.34□□□□□ -1.23
PVT1-205ENST00000517790 TCP11L2Q8N4U5 519 aa7.34□□□□□ -1.23
PVT1-205ENST00000517790 CCDC102AQ96A19 550 aa7.34□□□□□ -1.23
PVT1-205ENST00000517790 PARP4Q9UKK3 1724 aaKnown RBP7.34□□□□□ -1.23
PVT1-205ENST00000517790 PPP1R37O75864 691 aa7.33□□□□□ -1.24
PVT1-205ENST00000517790 MAP2K5Q13163 448 aa7.33□□□□□ -1.24
PVT1-205ENST00000517790 CC2D2BQ6DHV5 1058 aa7.33□□□□□ -1.24
PVT1-205ENST00000517790 SIRT1Q96EB6 747 aa7.33□□□□□ -1.24
PVT1-205ENST00000517790 PIK3C2GO75747 1445 aa7.33□□□□□ -1.24
PVT1-205ENST00000517790 ANKARQ7Z5J8 1434 aa7.33□□□□□ -1.24
PVT1-205ENST00000517790 GOLGB1Q14789 3259 aaKnown RBP7.32□□□□□ -1.24
PVT1-205ENST00000517790 IRF6O14896 467 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 SLC15A2Q16348 729 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 SH3D19Q5HYK7 790 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 CFAP70Q5T0N1 1121 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 NGDNQ8NEJ9 315 aaKnown RBP7.32□□□□□ -1.24
PVT1-205ENST00000517790 LARP6Q9BRS8 491 aaKnown RBP7.32□□□□□ -1.24
PVT1-205ENST00000517790 MTFR1LQ9H019 292 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 STK32BQ9NY57 414 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 OVOS2A0A0G2JMS6 1433 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 OVOS2A0A0J9YW53 1432 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 OVOS2Q6IE36 1432 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 LMO7Q8WWI1 1683 aa7.32□□□□□ -1.24
PVT1-205ENST00000517790 LRRC37A3O60309 1634 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 CAPN15O75808 1086 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 PDE4AP27815 886 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 TXNRD1Q16881 649 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 SPATA31E1Q6ZUB1 1445 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 ANKRD13AQ8IZ07 590 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 SPINK5Q9NQ38 1064 aaPredicted RBP7.31□□□□□ -1.24
PVT1-205ENST00000517790 POGKQ9P215 609 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 IVNS1ABPQ9Y6Y0 642 aa7.31□□□□□ -1.24
PVT1-205ENST00000517790 SMARCA5O60264 1052 aaPredicted RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 HSPA6P17066 643 aa7.3□□□□□ -1.24
PVT1-205ENST00000517790 NCLP19338 710 aaKnown RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 PPARGC1BQ86YN6 1023 aaKnown RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 MARCH10Q8NA82 808 aaPredicted RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 NLGN2Q8NFZ4 835 aa7.3□□□□□ -1.24
PVT1-205ENST00000517790 DRC1Q96MC2 740 aa7.3□□□□□ -1.24
PVT1-205ENST00000517790 C14orf93Q9H972 538 aaKnown RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 KIAA1522Q9P206 1035 aaPredicted RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 BCCIPQ9P287 314 aaKnown RBP eCLIP7.3□□□□□ -1.24
PVT1-205ENST00000517790 DHX57Q6P158 1386 aaKnown RBP7.3□□□□□ -1.24
PVT1-205ENST00000517790 MAP3K5Q99683 1374 aa7.3□□□□□ -1.24
PVT1-205ENST00000517790 ANKRD30BQ9BXX2 1392 aa7.3□□□□□ -1.24
PVT1-205ENST00000517790 ATP7BP35670 1465 aa7.3□□□□□ -1.24
PVT1-205ENST00000517790 ATP10DQ9P241 1426 aa7.29□□□□□ -1.24
PVT1-205ENST00000517790 YBX3P16989 372 aaKnown RBP eCLIP7.29□□□□□ -1.24
PVT1-205ENST00000517790 ZNF526Q8TF50 670 aaPredicted RBP7.29□□□□□ -1.24
PVT1-205ENST00000517790 PBXIP1Q96AQ6 731 aa7.29□□□□□ -1.24
PVT1-205ENST00000517790 TULP4Q9NRJ4 1543 aa7.28□□□□□ -1.24
PVT1-205ENST00000517790 TBC1D12O60347 775 aa7.28□□□□□ -1.24
PVT1-205ENST00000517790 PYGBP11216 843 aa7.28□□□□□ -1.24
PVT1-205ENST00000517790 DDB1Q16531 1140 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms