RNA–Protein interactions for RNA: ENST00000517570.5

MTCL1-205, Transcript of microtubule crosslinking factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MTCL1, Length 6,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTCL1-205ENST00000517570 CGNQ9P2M7 1197 aaKnown RBP19.58■□□□□ 0.73
MTCL1-205ENST00000517570 ATP2B2Q01814 1243 aa19.58■□□□□ 0.73
MTCL1-205ENST00000517570 GIMAP7Q8NHV1 300 aa19.58■□□□□ 0.73
MTCL1-205ENST00000517570 TMX1Q9H3N1 280 aa19.58■□□□□ 0.73
MTCL1-205ENST00000517570 NACAP1Q9BZK3 213 aa19.58■□□□□ 0.72
MTCL1-205ENST00000517570 FGD5Q6ZNL6 1462 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 MYL6BP14649 208 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 PRAM1Q96QH2 718 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 SLC12A5Q9H2X9 1139 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 IBSPP21815 317 aaPredicted RBP19.57■□□□□ 0.72
MTCL1-205ENST00000517570 IGF1RP08069 1367 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 SHTN1A0MZ66 631 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 SRGAP3O43295 1099 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 SSFA2P28290 1259 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 EIF5P55010 431 aaKnown RBP19.57■□□□□ 0.72
MTCL1-205ENST00000517570 SLFN5Q08AF3 891 aa19.57■□□□□ 0.72
MTCL1-205ENST00000517570 CLIP2Q9UDT6 1046 aa19.56■□□□□ 0.72
MTCL1-205ENST00000517570 SMARCA5O60264 1052 aaPredicted RBP19.56■□□□□ 0.72
MTCL1-205ENST00000517570 CCDC57Q2TAC2 916 aa19.56■□□□□ 0.72
MTCL1-205ENST00000517570 TAF4BQ92750 862 aa19.56■□□□□ 0.72
MTCL1-205ENST00000517570 POLR3GO15318 223 aaPredicted RBP19.56■□□□□ 0.72
MTCL1-205ENST00000517570 GNL3LQ9NVN8 582 aaKnown RBP19.56■□□□□ 0.72
MTCL1-205ENST00000517570 GBP2P32456 591 aaPredicted RBP19.56■□□□□ 0.72
MTCL1-205ENST00000517570 FERMT3Q86UX7 667 aa19.55■□□□□ 0.72
MTCL1-205ENST00000517570 CRACR2AQ9BSW2 395 aa19.55■□□□□ 0.72
MTCL1-205ENST00000517570 SOGA3Q5TF21 947 aa19.55■□□□□ 0.72
MTCL1-205ENST00000517570 MEX3CQ5U5Q3 659 aaKnown RBP19.55■□□□□ 0.72
MTCL1-205ENST00000517570 GAPVD1Q14C86 1478 aa19.55■□□□□ 0.72
MTCL1-205ENST00000517570 KRI1Q8N9T8 703 aaKnown RBP19.55■□□□□ 0.72
MTCL1-205ENST00000517570 TRERF1Q96PN7 1200 aa19.55■□□□□ 0.72
MTCL1-205ENST00000517570 INCENPQ9NQS7 918 aa19.55■□□□□ 0.72
MTCL1-205ENST00000517570 PIBF1Q8WXW3 757 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 ZSCAN12O43309 604 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 ZSCAN25Q6NSZ9 544 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 TNPO1Q92973 898 aaKnown RBP19.54■□□□□ 0.72
MTCL1-205ENST00000517570 SFPQP23246 707 aaKnown RBP eCLIP19.54■□□□□ 0.72
MTCL1-205ENST00000517570 CDK19Q9BWU1 502 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 GBP3Q9H0R5 595 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 KIF2AO00139 706 aaPredicted RBP19.54■□□□□ 0.72
MTCL1-205ENST00000517570 URI1O94763 535 aaPredicted RBP19.54■□□□□ 0.72
MTCL1-205ENST00000517570 PPP4R3BQ5MIZ7 849 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 C20orf194Q5TEA3 1177 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 RAD54L2Q9Y4B4 1467 aa19.54■□□□□ 0.72
MTCL1-205ENST00000517570 CFTRP13569 1480 aa19.53■□□□□ 0.72
MTCL1-205ENST00000517570 SSBP05455 408 aaKnown RBP eCLIP19.53■□□□□ 0.72
MTCL1-205ENST00000517570 ATF3P18847 181 aa19.53■□□□□ 0.72
MTCL1-205ENST00000517570 KRT32Q14532 448 aa19.53■□□□□ 0.72
MTCL1-205ENST00000517570 KIF18AQ8NI77 898 aa19.53■□□□□ 0.72
MTCL1-205ENST00000517570 KIAA1107Q9UPP5 1409 aa19.53■□□□□ 0.72
MTCL1-205ENST00000517570 SPINK5Q9NQ38 1064 aaPredicted RBP19.53■□□□□ 0.72
MTCL1-205ENST00000517570 JAKMIP3Q5VZ66 844 aa19.53■□□□□ 0.72
MTCL1-205ENST00000517570 WWC2Q6AWC2 1192 aa19.52■□□□□ 0.72
MTCL1-205ENST00000517570 TNNT1P13805 278 aa19.52■□□□□ 0.72
MTCL1-205ENST00000517570 ZNF397Q8NF99 534 aaPredicted RBP19.52■□□□□ 0.72
MTCL1-205ENST00000517570 PRPF40BQ6NWY9 871 aaKnown RBP19.52■□□□□ 0.71
MTCL1-205ENST00000517570 TRMT1Q9NXH9 659 aaKnown RBP19.52■□□□□ 0.71
MTCL1-205ENST00000517570 USP25Q9UHP3 1055 aa19.52■□□□□ 0.71
MTCL1-205ENST00000517570 KIF5CO60282 957 aa19.51■□□□□ 0.71
MTCL1-205ENST00000517570 ANO10Q9NW15 660 aa19.51■□□□□ 0.71
MTCL1-205ENST00000517570 SPDYE4A6NLX3 237 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 TDO2P48775 406 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 TBC1D2Q9BYX2 928 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 CABP1Q9NZU7 370 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 C16orf45Q96MC5 204 aaPredicted RBP19.5■□□□□ 0.71
MTCL1-205ENST00000517570 CTNNA3Q9UI47 895 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 ZHX1Q9UKY1 873 aaPredicted RBP19.5■□□□□ 0.71
MTCL1-205ENST00000517570 WASF1Q92558 559 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 CEP131Q9UPN4 1083 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 GPRASP1Q5JY77 1395 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 MAP2K1Q02750 393 aaPredicted RBP19.5■□□□□ 0.71
MTCL1-205ENST00000517570 RPAP2Q8IXW5 612 aaPredicted RBP19.5■□□□□ 0.71
MTCL1-205ENST00000517570 UBAC1Q9BSL1 405 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
MTCL1-205ENST00000517570 CABP4P57796 275 aa19.49■□□□□ 0.71
MTCL1-205ENST00000517570 ESCO1Q5FWF5 840 aa19.49■□□□□ 0.71
MTCL1-205ENST00000517570 KLHL34Q8N239 644 aa19.49■□□□□ 0.71
MTCL1-205ENST00000517570 CCDC113Q9H0I3 377 aa19.49■□□□□ 0.71
MTCL1-205ENST00000517570 MX1P20591 662 aa19.49■□□□□ 0.71
MTCL1-205ENST00000517570 ANKRD30BQ9BXX2 1392 aa19.49■□□□□ 0.71
MTCL1-205ENST00000517570 TOP1P11387 765 aaKnown RBP19.48■□□□□ 0.71
MTCL1-205ENST00000517570 EZRP15311 586 aaKnown RBP19.48■□□□□ 0.71
MTCL1-205ENST00000517570 SPA17Q15506 151 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 MAP9Q49MG5 647 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 RAI14Q9P0K7 980 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 TICAM2Q86XR7 235 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 CALCOCO1Q9P1Z2 691 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 GTF2F1P35269 517 aaKnown RBP eCLIP19.48■□□□□ 0.71
MTCL1-205ENST00000517570 PAF1Q8N7H5 531 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 IMMTQ16891 758 aaKnown RBP19.48■□□□□ 0.71
MTCL1-205ENST00000517570 KIF4BQ2VIQ3 1234 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 CKAP2LQ8IYA6 745 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 DYDC1Q8WWB3 177 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 SLC26A8Q96RN1 970 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 ERICH3Q5RHP9 1530 aa19.48■□□□□ 0.71
MTCL1-205ENST00000517570 DDX54Q8TDD1 881 aaKnown RBP19.47■□□□□ 0.71
MTCL1-205ENST00000517570 RNF187Q5TA31 235 aaPredicted RBP19.47■□□□□ 0.71
MTCL1-205ENST00000517570 TATP17735 454 aaPredicted RBP19.47■□□□□ 0.71
MTCL1-205ENST00000517570 BMP2KQ9NSY1 1161 aaPredicted RBP19.47■□□□□ 0.71
MTCL1-205ENST00000517570 RBM27Q9P2N5 1060 aaKnown RBP19.47■□□□□ 0.71
MTCL1-205ENST00000517570 RRS1Q15050 365 aaKnown RBP19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms