RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 ST18O60284 1047 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 SIGLEC1Q9BZZ2 1709 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 PTPRMP28827 1452 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 ZFYVE9O95405 1425 aa15.18■□□□□ 0.02
PCM1-203ENST00000517545 LRSAM1Q6UWE0 723 aa15.17■□□□□ 0.02
PCM1-203ENST00000517545 REREQ9P2R6 1566 aa15.17■□□□□ 0.02
PCM1-203ENST00000517545 KRT24Q2M2I5 525 aa15.17■□□□□ 0.02
PCM1-203ENST00000517545 CDC42BPGQ6DT37 1551 aa15.17■□□□□ 0.02
PCM1-203ENST00000517545 CFAP44Q96MT7 982 aa15.17■□□□□ 0.02
PCM1-203ENST00000517545 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
PCM1-203ENST00000517545 HECW2Q9P2P5 1572 aa15.16■□□□□ 0.02
PCM1-203ENST00000517545 ANKRD44Q8N8A2 993 aa15.16■□□□□ 0.02
PCM1-203ENST00000517545 ATP10DQ9P241 1426 aa15.16■□□□□ 0.02
PCM1-203ENST00000517545 CEP85Q6P2H3 762 aa15.15■□□□□ 0.02
PCM1-203ENST00000517545 IL13P35225 146 aa15.15■□□□□ 0.02
PCM1-203ENST00000517545 ZBTB7CA1YPR0 619 aa15.14■□□□□ 0.01
PCM1-203ENST00000517545 ZRANB1Q9UGI0 708 aa15.14■□□□□ 0.01
PCM1-203ENST00000517545 RAPGEF3O95398 923 aa15.14■□□□□ 0.01
PCM1-203ENST00000517545 CASC1Q6TDU7 716 aa15.14■□□□□ 0.01
PCM1-203ENST00000517545 PIK3C2BO00750 1634 aa15.14■□□□□ 0.01
PCM1-203ENST00000517545 TRHP20396 242 aaPredicted RBP15.13■□□□□ 0.01
PCM1-203ENST00000517545 MEIS3Q99687 375 aa15.13■□□□□ 0.01
PCM1-203ENST00000517545 YEATS2Q9ULM3 1422 aa15.13■□□□□ 0.01
PCM1-203ENST00000517545 REC8O95072 547 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 NEK4P51957 841 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 FOXD4L6Q3SYB3 417 aaPredicted RBP15.12■□□□□ 0.01
PCM1-203ENST00000517545 FOXD4L3Q6VB84 417 aaPredicted RBP15.12■□□□□ 0.01
PCM1-203ENST00000517545 NOL8Q76FK4 1167 aaKnown RBP15.12■□□□□ 0.01
PCM1-203ENST00000517545 TMX3Q96JJ7 454 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 ERC2O15083 957 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 MPNDQ8N594 471 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 MSH6P52701 1360 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 RIMS2Q9UQ26 1411 aa15.12■□□□□ 0.01
PCM1-203ENST00000517545 TSHZ3Q63HK5 1081 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 CCDC39Q9UFE4 941 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 NME9Q86XW9 330 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 RPAP2Q8IXW5 612 aaPredicted RBP15.11■□□□□ 0.01
PCM1-203ENST00000517545 RGS12O14924 1447 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 POGZQ7Z3K3 1410 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 RTL1A6NKG5 1358 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 KIF24Q5T7B8 1368 aa15.11■□□□□ 0.01
PCM1-203ENST00000517545 RRS1Q15050 365 aaKnown RBP15.1■□□□□ 0.01
PCM1-203ENST00000517545 KIF20BQ96Q89 1820 aa15.1■□□□□ 0.01
PCM1-203ENST00000517545 ARHGEF40Q8TER5 1519 aa15.1■□□□□ 0.01
PCM1-203ENST00000517545 CSPP1Q1MSJ5 1256 aa15.1■□□□□ 0.01
PCM1-203ENST00000517545 WAPLQ7Z5K2 1190 aa15.1■□□□□ 0.01
PCM1-203ENST00000517545 MCM5P33992 734 aa15.1■□□□□ 0.01
PCM1-203ENST00000517545 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
PCM1-203ENST00000517545 JARID2Q92833 1246 aaPredicted RBP15.09■□□□□ 0.01
PCM1-203ENST00000517545 GDPD2Q9HCC8 539 aa15.09■□□□□ 0.01
PCM1-203ENST00000517545 PRDM4Q9UKN5 801 aa15.09■□□□□ 0.01
PCM1-203ENST00000517545 BRD1O95696 1058 aa15.09■□□□□ 0.01
PCM1-203ENST00000517545 DNAJC5Q9H3Z4 198 aa15.09■□□□□ 0.01
PCM1-203ENST00000517545 MLH3Q9UHC1 1453 aa15.09■□□□□ 0.01
PCM1-203ENST00000517545 MAP2P11137 1827 aaKnown RBP15.08■□□□□ 0.01
PCM1-203ENST00000517545 MBD3O95983 291 aa15.08■□□□□ 0.01
PCM1-203ENST00000517545 LMOD3Q0VAK6 560 aa15.08■□□□□ 0.01
PCM1-203ENST00000517545 PALD1Q9ULE6 856 aa15.08■□□□□ 0.01
PCM1-203ENST00000517545 CLTCQ00610 1675 aaKnown RBP15.08■□□□□ 0.01
PCM1-203ENST00000517545 DYNC1I1O14576 645 aa15.08■□□□□ 0
PCM1-203ENST00000517545 PTMAP06454 111 aaKnown RBP15.08■□□□□ 0
PCM1-203ENST00000517545 SASS6Q6UVJ0 657 aa15.08■□□□□ 0
PCM1-203ENST00000517545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.08■□□□□ 0
PCM1-203ENST00000517545 TSPY26PQ9H489 355 aa15.07■□□□□ 0
PCM1-203ENST00000517545 PDE1AP54750 535 aa15.07■□□□□ 0
PCM1-203ENST00000517545 GADD45BO75293 160 aaPredicted RBP15.07■□□□□ 0
PCM1-203ENST00000517545 AEBP1Q8IUX7 1158 aa15.07■□□□□ 0
PCM1-203ENST00000517545 DLG5Q8TDM6 1919 aa15.06■□□□□ 0
PCM1-203ENST00000517545 ZNF830Q96NB3 372 aaPredicted RBP15.06■□□□□ 0
PCM1-203ENST00000517545 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
PCM1-203ENST00000517545 MYO5BQ9ULV0 1848 aa15.06■□□□□ 0
PCM1-203ENST00000517545 MCM10Q7L590 875 aa15.05■□□□□ 0
PCM1-203ENST00000517545 TSC1Q92574 1164 aa15.05■□□□□ 0
PCM1-203ENST00000517545 TPRNQ4KMQ1 711 aa15.05■□□□□ -0
PCM1-203ENST00000517545 EXOC6BQ9Y2D4 811 aa15.05■□□□□ -0
PCM1-203ENST00000517545 CUL4AQ13619 759 aa15.04■□□□□ -0
PCM1-203ENST00000517545 F6X3S4 739 aa15.04■□□□□ -0
PCM1-203ENST00000517545 KIAA2012Q0VF49 1180 aa15.04■□□□□ -0
PCM1-203ENST00000517545 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
PCM1-203ENST00000517545 UPF3BQ9BZI7 483 aaKnown RBP15.04■□□□□ -0
PCM1-203ENST00000517545 PRDM10Q9NQV6 1147 aa15.04■□□□□ -0
PCM1-203ENST00000517545 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
PCM1-203ENST00000517545 SLC4A10Q6U841 1118 aa15.04■□□□□ -0
PCM1-203ENST00000517545 ESYT1Q9BSJ8 1104 aa15.04■□□□□ -0
PCM1-203ENST00000517545 CDK12Q9NYV4 1490 aaPredicted RBP15.03■□□□□ -0
PCM1-203ENST00000517545 DIP2BQ9P265 1576 aa15.03■□□□□ -0
PCM1-203ENST00000517545 SLC4A2P04920 1241 aa15.03■□□□□ -0
PCM1-203ENST00000517545 C17orf53Q8N3J3 647 aaPredicted RBP15.03■□□□□ -0
PCM1-203ENST00000517545 DNTTIP2Q5QJE6 756 aaKnown RBP15.02■□□□□ -0
PCM1-203ENST00000517545 FBXO31Q5XUX0 539 aaPredicted RBP15.02■□□□□ -0
PCM1-203ENST00000517545 OSBPL3Q9H4L5 887 aa15.02■□□□□ -0
PCM1-203ENST00000517545 ANO2Q9NQ90 1003 aa15.02■□□□□ -0
PCM1-203ENST00000517545 MIS18AQ9NYP9 233 aa15.02■□□□□ -0
PCM1-203ENST00000517545 CPSF1Q10570 1443 aaKnown RBP15.02■□□□□ -0
PCM1-203ENST00000517545 USP48Q86UV5 1035 aa15.02■□□□□ -0
PCM1-203ENST00000517545 CHL1O00533 1208 aa15.02□□□□□ -0.01
PCM1-203ENST00000517545 G2E3Q7L622 706 aa15.02□□□□□ -0.01
PCM1-203ENST00000517545 USP25Q9UHP3 1055 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms