RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 CCDC102BQ68D86 513 aa9.31□□□□□ -0.92
CTNNA1-202ENST00000517533 ZBTB24O43167 697 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 ATP2B4P23634 1241 aa9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 VARSP26640 1264 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 ATP1A2P50993 1020 aa9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 WNT7BP56706 349 aa9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 FOXD4L5Q5VV16 416 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 SND1Q7KZF4 910 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 SEPT12Q8IYM1 358 aa9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 GAS2L2Q8NHY3 880 aa9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 FOXD4L4Q8WXT5 416 aaPredicted RBP9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-202ENST00000517533 PRMT3O60678 531 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 GRM5P41594 1212 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 SWI5Q1ZZU3 235 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 ZNF428Q96B54 188 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 PRIMPOLQ96LW4 560 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 TMPRSS4Q9NRS4 437 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 MAP4K5Q9Y4K4 846 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 TLL2Q9Y6L7 1015 aa9.29□□□□□ -0.92
CTNNA1-202ENST00000517533 SIAH2O43255 324 aa9.28□□□□□ -0.92
CTNNA1-202ENST00000517533 SERPINB4P48594 390 aa9.28□□□□□ -0.92
CTNNA1-202ENST00000517533 RPIAP49247 311 aa9.28□□□□□ -0.92
CTNNA1-202ENST00000517533 RC3H1Q5TC82 1133 aaKnown RBP9.28□□□□□ -0.92
CTNNA1-202ENST00000517533 VASH1Q7L8A9 365 aaPredicted RBP9.28□□□□□ -0.92
CTNNA1-202ENST00000517533 SEC13P55735 322 aa9.27□□□□□ -0.93
CTNNA1-202ENST00000517533 USP4Q13107 963 aa9.27□□□□□ -0.93
CTNNA1-202ENST00000517533 CDK15Q96Q40 435 aa9.27□□□□□ -0.93
CTNNA1-202ENST00000517533 PURBQ96QR8 312 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-202ENST00000517533 CDV3Q9UKY7 258 aaKnown RBP9.27□□□□□ -0.93
CTNNA1-202ENST00000517533 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.26□□□□□ -0.93
CTNNA1-202ENST00000517533 TSEN2Q8NCE0 465 aaKnown RBP9.26□□□□□ -0.93
CTNNA1-202ENST00000517533 OSBPL3Q9H4L5 887 aa9.26□□□□□ -0.93
CTNNA1-202ENST00000517533 TMEM229AB2RXF0 380 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 ERVK-9P63128 1117 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 PSME1Q06323 249 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 ARID5BQ14865 1188 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 B4GALNT3Q6L9W6 998 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 CAPN12Q6ZSI9 719 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 EHBP1Q8NDI1 1231 aa9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 CXXC1Q9P0U4 656 aaPredicted RBP9.25□□□□□ -0.93
CTNNA1-202ENST00000517533 FSHRP23945 695 aa9.24□□□□□ -0.93
CTNNA1-202ENST00000517533 GGCXP38435 758 aa9.24□□□□□ -0.93
CTNNA1-202ENST00000517533 SCNN1DP51172 638 aa9.24□□□□□ -0.93
CTNNA1-202ENST00000517533 CYLDQ9NQC7 956 aa9.24□□□□□ -0.93
CTNNA1-202ENST00000517533 LILRA1O75019 489 aa9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 NR3C2P08235 984 aa9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 ARID4AP29374 1257 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 RBM25P49756 843 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 NOM1Q5C9Z4 860 aaKnown RBP9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 TAS1R3Q7RTX0 852 aa9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 ZNF784Q8NCA9 323 aaPredicted RBP9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 ZNF358Q9NW07 568 aa9.23□□□□□ -0.93
CTNNA1-202ENST00000517533 ADD1P35611 737 aaKnown RBP9.22□□□□□ -0.93
CTNNA1-202ENST00000517533 CCDC27Q2M243 656 aa9.22□□□□□ -0.93
CTNNA1-202ENST00000517533 C1orf216Q8TAB5 229 aa9.22□□□□□ -0.93
CTNNA1-202ENST00000517533 CCER1Q8TC90 406 aaPredicted RBP9.22□□□□□ -0.93
CTNNA1-202ENST00000517533 SHROOM4Q9ULL8 1493 aa9.21□□□□□ -0.93
CTNNA1-202ENST00000517533 SOWAHDA6NJG2 315 aa9.21□□□□□ -0.94
CTNNA1-202ENST00000517533 WEE1P30291 646 aa9.21□□□□□ -0.94
CTNNA1-202ENST00000517533 SIRT1Q96EB6 747 aa9.21□□□□□ -0.94
CTNNA1-202ENST00000517533 CD2BP2O95400 341 aaKnown RBP9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 FKBP5Q13451 457 aaPredicted RBP9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 CC2D2BQ6DHV5 1058 aa9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 MPNDQ8N594 471 aa9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 MRGPRX2Q96LB1 330 aa9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 HINFPQ9BQA5 517 aa9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 SEPT3Q9UH03 358 aa9.2□□□□□ -0.94
CTNNA1-202ENST00000517533 MYCP01106 439 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-202ENST00000517533 PPP1R26Q5T8A7 1209 aaPredicted RBP9.19□□□□□ -0.94
CTNNA1-202ENST00000517533 CCDC125Q86Z20 511 aa9.19□□□□□ -0.94
CTNNA1-202ENST00000517533 ETNK1Q9HBU6 452 aa9.19□□□□□ -0.94
CTNNA1-202ENST00000517533 M0R2N6 131 aa9.18□□□□□ -0.94
CTNNA1-202ENST00000517533 ADH1CP00326 375 aa9.18□□□□□ -0.94
CTNNA1-202ENST00000517533 EPHA4P54764 986 aa9.18□□□□□ -0.94
CTNNA1-202ENST00000517533 TNS4Q8IZW8 715 aa9.18□□□□□ -0.94
CTNNA1-202ENST00000517533 MKNK1Q9BUB5 465 aa9.18□□□□□ -0.94
CTNNA1-202ENST00000517533 ANO2Q9NQ90 1003 aa9.18□□□□□ -0.94
CTNNA1-202ENST00000517533 WNT7AO00755 349 aa9.17□□□□□ -0.94
CTNNA1-202ENST00000517533 C21orf2O43822 256 aa9.17□□□□□ -0.94
CTNNA1-202ENST00000517533 SLC19A1P41440 591 aa9.17□□□□□ -0.94
CTNNA1-202ENST00000517533 GDF10P55107 478 aa9.17□□□□□ -0.94
CTNNA1-202ENST00000517533 ZNF211Q13398 564 aaPredicted RBP9.17□□□□□ -0.94
CTNNA1-202ENST00000517533 ECM1Q16610 540 aa9.17□□□□□ -0.94
CTNNA1-202ENST00000517533 MMRN1Q13201 1228 aa9.16□□□□□ -0.94
CTNNA1-202ENST00000517533 DNAJC14Q6Y2X3 702 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-202ENST00000517533 CCDC116Q8IYX3 515 aa9.16□□□□□ -0.94
CTNNA1-202ENST00000517533 KDF1Q8NAX2 398 aaPredicted RBP9.16□□□□□ -0.94
CTNNA1-202ENST00000517533 SERTAD1Q9UHV2 236 aa9.16□□□□□ -0.94
CTNNA1-202ENST00000517533 RBM19Q9Y4C8 960 aaKnown RBP9.16□□□□□ -0.94
CTNNA1-202ENST00000517533 MTMR3Q13615 1198 aa9.15□□□□□ -0.94
CTNNA1-202ENST00000517533 SPRYD7Q5W111 196 aa9.15□□□□□ -0.94
CTNNA1-202ENST00000517533 PKD2L1Q9P0L9 805 aa9.15□□□□□ -0.94
CTNNA1-202ENST00000517533 WASLO00401 505 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-202ENST00000517533 INHAP05111 366 aa9.14□□□□□ -0.95
CTNNA1-202ENST00000517533 TSPAN10Q9H1Z9 355 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-202ENST00000517533 RAB6BQ9NRW1 208 aa9.14□□□□□ -0.95
CTNNA1-202ENST00000517533 USP3Q9Y6I4 520 aa9.14□□□□□ -0.95
CTNNA1-202ENST00000517533 DNMT3AQ9Y6K1 912 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-202ENST00000517533 ABL1P00519 1130 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms