RNA–Protein interactions for RNA: ENST00000517352.1

TNFRSF11B-202, Transcript of TNF receptor superfamily member 11b, humanhuman

TSL 1 (best)

Gene TNFRSF11B, Length 1,144 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-202ENST00000517352 LRRC37A3O60309 1634 aa10.24□□□□□ -0.77
TNFRSF11B-202ENST00000517352 NUP188Q5SRE5 1749 aa10.24□□□□□ -0.77
TNFRSF11B-202ENST00000517352 HOXC9P31274 260 aa10.23□□□□□ -0.77
TNFRSF11B-202ENST00000517352 GGNBP2Q9H3C7 697 aa10.23□□□□□ -0.77
TNFRSF11B-202ENST00000517352 USP47Q96K76 1375 aa10.23□□□□□ -0.77
TNFRSF11B-202ENST00000517352 RREB1Q92766 1687 aa10.22□□□□□ -0.77
TNFRSF11B-202ENST00000517352 RRS1Q15050 365 aaKnown RBP10.22□□□□□ -0.77
TNFRSF11B-202ENST00000517352 MAP3K19Q56UN5 1328 aa10.22□□□□□ -0.77
TNFRSF11B-202ENST00000517352 SENP3-EIF4A1A0A087X0R7 540 aa10.21□□□□□ -0.77
TNFRSF11B-202ENST00000517352 KCNQ4P56696 695 aa10.21□□□□□ -0.77
TNFRSF11B-202ENST00000517352 ZNF827Q17R98 1081 aa10.21□□□□□ -0.77
TNFRSF11B-202ENST00000517352 MPRIPQ6WCQ1 1025 aa10.21□□□□□ -0.77
TNFRSF11B-202ENST00000517352 USHBP1Q8N6Y0 703 aa10.21□□□□□ -0.77
TNFRSF11B-202ENST00000517352 ZNF784Q8NCA9 323 aaPredicted RBP10.21□□□□□ -0.77
TNFRSF11B-202ENST00000517352 NFAT5O94916 1531 aa10.21□□□□□ -0.78
TNFRSF11B-202ENST00000517352 GRIN3BO60391 1043 aa10.2□□□□□ -0.78
TNFRSF11B-202ENST00000517352 ABCC6O95255 1503 aa10.2□□□□□ -0.78
TNFRSF11B-202ENST00000517352 FBLN1P23142 703 aa10.2□□□□□ -0.78
TNFRSF11B-202ENST00000517352 CGNL1Q0VF96 1302 aa10.2□□□□□ -0.78
TNFRSF11B-202ENST00000517352 FLAD1Q8NFF5 587 aa10.2□□□□□ -0.78
TNFRSF11B-202ENST00000517352 LRRC4BQ9NT99 713 aa10.2□□□□□ -0.78
TNFRSF11B-202ENST00000517352 ANKRD36BQ8N2N9 1353 aa10.19□□□□□ -0.78
TNFRSF11B-202ENST00000517352 AK7Q96M32 723 aa10.19□□□□□ -0.78
TNFRSF11B-202ENST00000517352 AKAP12Q02952 1782 aa10.19□□□□□ -0.78
TNFRSF11B-202ENST00000517352 PEAK1Q9H792 1746 aa10.19□□□□□ -0.78
TNFRSF11B-202ENST00000517352 PCDH11XQ9BZA7 1347 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 PCDH11YQ9BZA8 1340 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 GIGYF1O75420 1035 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 MYCNP04198 464 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 NBPF6Q5VWK0 638 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 SMARCC1Q92922 1105 aaPredicted RBP10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 AKT1S1Q96B36 256 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 NBPF4Q96M43 638 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 SPG7Q9UQ90 795 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 COL18A1P39060 1754 aa10.18□□□□□ -0.78
TNFRSF11B-202ENST00000517352 PNPLA7Q6ZV29 1317 aa10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 FYB1O15117 783 aa10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 TRIM26Q12899 539 aaPredicted RBP10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 HSP90AB2PQ58FF8 381 aa10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 MSL1Q68DK7 614 aa10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 TESK2Q96S53 571 aa10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 CD163L1Q9NR16 1453 aa10.17□□□□□ -0.78
TNFRSF11B-202ENST00000517352 RGPD3A6NKT7 1758 aaPredicted RBP10.16□□□□□ -0.78
TNFRSF11B-202ENST00000517352 RGPD4Q7Z3J3 1758 aa10.16□□□□□ -0.78
TNFRSF11B-202ENST00000517352 KAT6BQ8WYB5 2073 aa10.16□□□□□ -0.78
TNFRSF11B-202ENST00000517352 RTL1A6NKG5 1358 aa10.15□□□□□ -0.78
TNFRSF11B-202ENST00000517352 PHF14O94880 888 aa10.15□□□□□ -0.78
TNFRSF11B-202ENST00000517352 C1QTNF8P60827 252 aa10.15□□□□□ -0.78
TNFRSF11B-202ENST00000517352 SGIP1Q9BQI5 828 aa10.15□□□□□ -0.78
TNFRSF11B-202ENST00000517352 PCGF6Q9BYE7 350 aa10.15□□□□□ -0.78
TNFRSF11B-202ENST00000517352 FLT4P35916 1363 aa10.14□□□□□ -0.79
TNFRSF11B-202ENST00000517352 MON2Q7Z3U7 1717 aa10.14□□□□□ -0.79
TNFRSF11B-202ENST00000517352 TNNT2P45379 298 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-202ENST00000517352 COL23A1Q86Y22 540 aaPredicted RBP10.14□□□□□ -0.79
TNFRSF11B-202ENST00000517352 TMOD3Q9NYL9 352 aa10.14□□□□□ -0.79
TNFRSF11B-202ENST00000517352 RGPD5Q99666 1765 aa10.14□□□□□ -0.79
TNFRSF11B-202ENST00000517352 UTRNP46939 3433 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 MYOM1P52179 1685 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 NHSQ6T4R5 1651 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 SBF2Q86WG5 1849 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 NLGN2Q8NFZ4 835 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 INSRP06213 1382 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 PALLDQ8WX93 1383 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 MAP3K5Q99683 1374 aa10.13□□□□□ -0.79
TNFRSF11B-202ENST00000517352 LTN1O94822 1766 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 CASZ1Q86V15 1759 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 ATP6V1AP38606 617 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 IFNL2Q8IZJ0 200 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 ZNF526Q8TF50 670 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 GPBP1L1Q9HC44 474 aaPredicted RBP10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 WWC3Q9ULE0 1092 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 CD2APQ9Y5K6 639 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 EMILIN1Q9Y6C2 1016 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 WNK3Q9BYP7 1800 aa10.11□□□□□ -0.79
TNFRSF11B-202ENST00000517352 NSD3Q9BZ95 1437 aa10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 GNPATO15228 680 aa10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 RBM42Q9BTD8 480 aaKnown RBP10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 TIMELESSQ9UNS1 1208 aa10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 MEGF6O75095 1541 aa10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 KIF24Q5T7B8 1368 aa10.1□□□□□ -0.79
TNFRSF11B-202ENST00000517352 CYP27B1O15528 508 aa10.09□□□□□ -0.79
TNFRSF11B-202ENST00000517352 ABCB7O75027 752 aa10.09□□□□□ -0.79
TNFRSF11B-202ENST00000517352 PIGBQ92521 554 aa10.09□□□□□ -0.79
TNFRSF11B-202ENST00000517352 FOXD4L1Q9NU39 408 aa10.09□□□□□ -0.79
TNFRSF11B-202ENST00000517352 BTAF1O14981 1849 aa10.09□□□□□ -0.79
TNFRSF11B-202ENST00000517352 LOC102724428A0A0B4J2F2 783 aa10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 HSP90AB1P08238 724 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 PRKCSHP14314 528 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 SIK1P57059 783 aa10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 C1orf141Q5JVX7 400 aa10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 TRAPPC3LQ5T215 181 aa10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 RTCBQ9Y3I0 505 aaKnown RBP10.08□□□□□ -0.8
TNFRSF11B-202ENST00000517352 YBX3P16989 372 aaKnown RBP eCLIP10.07□□□□□ -0.8
TNFRSF11B-202ENST00000517352 SSFA2P28290 1259 aa10.07□□□□□ -0.8
TNFRSF11B-202ENST00000517352 RFC4P35249 363 aa10.07□□□□□ -0.8
TNFRSF11B-202ENST00000517352 CABP4P57796 275 aa10.07□□□□□ -0.8
TNFRSF11B-202ENST00000517352 CARD14Q9BXL6 1004 aa10.07□□□□□ -0.8
TNFRSF11B-202ENST00000517352 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms