RNA–Protein interactions for RNA: ENST00000516587.1

RN7SKP195-201, Transcript of RNA, 7SK small nuclear pseudogene 195, humanhuman

BASIC

Gene RN7SKP195, Length 303 nt, Biotype misc RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP195-201ENST00000516587 U2AF1Q01081 240 aaKnown RBP eCLIP17.14■□□□□ 0.33
RN7SKP195-201ENST00000516587 KRT27Q7Z3Y8 459 aa17.14■□□□□ 0.33
RN7SKP195-201ENST00000516587 SPG7Q9UQ90 795 aa17.14■□□□□ 0.33
RN7SKP195-201ENST00000516587 LRRC37A3O60309 1634 aa17.14■□□□□ 0.33
RN7SKP195-201ENST00000516587 WDR43Q15061 677 aaKnown RBP eCLIP17.13■□□□□ 0.33
RN7SKP195-201ENST00000516587 AMOTQ4VCS5 1084 aa17.13■□□□□ 0.33
RN7SKP195-201ENST00000516587 FCHSD2O94868 740 aa17.12■□□□□ 0.33
RN7SKP195-201ENST00000516587 ZCRB1Q8TBF4 217 aaKnown RBP17.12■□□□□ 0.33
RN7SKP195-201ENST00000516587 MEGF6O75095 1541 aa17.11■□□□□ 0.33
RN7SKP195-201ENST00000516587 PLEKHO1Q53GL0 409 aaPredicted RBP17.11■□□□□ 0.33
RN7SKP195-201ENST00000516587 PCDH11XQ9BZA7 1347 aa17.11■□□□□ 0.33
RN7SKP195-201ENST00000516587 PCDH11YQ9BZA8 1340 aa17.11■□□□□ 0.33
RN7SKP195-201ENST00000516587 BRWD3Q6RI45 1802 aa17.1■□□□□ 0.33
RN7SKP195-201ENST00000516587 HMOX1P09601 288 aa17.1■□□□□ 0.33
RN7SKP195-201ENST00000516587 MRS2Q9HD23 443 aa17.1■□□□□ 0.33
RN7SKP195-201ENST00000516587 PKD1L3Q7Z443 1732 aa17.1■□□□□ 0.33
RN7SKP195-201ENST00000516587 FAM196AQ6ZSG2 479 aa17.09■□□□□ 0.33
RN7SKP195-201ENST00000516587 AEBP1Q8IUX7 1158 aa17.08■□□□□ 0.32
RN7SKP195-201ENST00000516587 HSP90AB1P08238 724 aaKnown RBP17.07■□□□□ 0.32
RN7SKP195-201ENST00000516587 BCL9O00512 1426 aa17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 MAPK8IP3Q9UPT6 1336 aa17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 CCER2I3L3R5 266 aa17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 C1orf141Q5JVX7 400 aa17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 IFNL2Q8IZJ0 200 aa17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 DDX54Q8TDD1 881 aaKnown RBP17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 RSPH6AQ9H0K4 717 aa17.06■□□□□ 0.32
RN7SKP195-201ENST00000516587 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
RN7SKP195-201ENST00000516587 GAS2L2Q8NHY3 880 aa17.05■□□□□ 0.32
RN7SKP195-201ENST00000516587 ZNF530Q6P9A1 599 aaPredicted RBP17.03■□□□□ 0.32
RN7SKP195-201ENST00000516587 CCDC125Q86Z20 511 aa17.03■□□□□ 0.32
RN7SKP195-201ENST00000516587 MARCH10Q8NA82 808 aaPredicted RBP17.03■□□□□ 0.32
RN7SKP195-201ENST00000516587 SHANK3Q9BYB0 1731 aa17.03■□□□□ 0.32
RN7SKP195-201ENST00000516587 NKX1-1Q15270 411 aaPredicted RBP17.01■□□□□ 0.31
RN7SKP195-201ENST00000516587 AKAP4Q5JQC9 854 aa17.01■□□□□ 0.31
RN7SKP195-201ENST00000516587 ILDR2Q71H61 639 aa17.01■□□□□ 0.31
RN7SKP195-201ENST00000516587 PNISRQ8TF01 805 aaKnown RBP17.01■□□□□ 0.31
RN7SKP195-201ENST00000516587 CYP27B1O15528 508 aa17■□□□□ 0.31
RN7SKP195-201ENST00000516587 PHKG2P15735 406 aa17■□□□□ 0.31
RN7SKP195-201ENST00000516587 DCAF5Q96JK2 942 aa17■□□□□ 0.31
RN7SKP195-201ENST00000516587 ADAMTS8Q9UP79 889 aa17■□□□□ 0.31
RN7SKP195-201ENST00000516587 SF3B2Q13435 895 aaKnown RBP16.99■□□□□ 0.31
RN7SKP195-201ENST00000516587 MTHFSDQ2M296 383 aaKnown RBP16.99■□□□□ 0.31
RN7SKP195-201ENST00000516587 RUNDC1Q96C34 613 aa16.99■□□□□ 0.31
RN7SKP195-201ENST00000516587 PLEKHF1Q96S99 279 aa16.98■□□□□ 0.31
RN7SKP195-201ENST00000516587 GNAT3A8MTJ3 354 aa16.97■□□□□ 0.31
RN7SKP195-201ENST00000516587 HTATSF1O43719 755 aaKnown RBP16.97■□□□□ 0.31
RN7SKP195-201ENST00000516587 CCDC184Q52MB2 194 aa16.97■□□□□ 0.31
RN7SKP195-201ENST00000516587 RTF1Q92541 710 aaKnown RBP16.97■□□□□ 0.31
RN7SKP195-201ENST00000516587 MAP3K5Q99683 1374 aa16.97■□□□□ 0.31
RN7SKP195-201ENST00000516587 LMOD3Q0VAK6 560 aa16.96■□□□□ 0.31
RN7SKP195-201ENST00000516587 FAM182BQ5T319 152 aa16.96■□□□□ 0.31
RN7SKP195-201ENST00000516587 MIER1Q8N108 512 aa16.96■□□□□ 0.31
RN7SKP195-201ENST00000516587 PHACTR3Q96KR7 559 aa16.96■□□□□ 0.31
RN7SKP195-201ENST00000516587 BCL11BQ9C0K0 894 aaPredicted RBP16.96■□□□□ 0.31
RN7SKP195-201ENST00000516587 NHSQ6T4R5 1651 aa16.96■□□□□ 0.31
RN7SKP195-201ENST00000516587 SBF2Q86WG5 1849 aa16.96■□□□□ 0.3
RN7SKP195-201ENST00000516587 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
RN7SKP195-201ENST00000516587 DOT1LQ8TEK3 1739 aa16.95■□□□□ 0.3
RN7SKP195-201ENST00000516587 HMGB2P26583 209 aaKnown RBP16.94■□□□□ 0.3
RN7SKP195-201ENST00000516587 NFE2L2Q16236 605 aa16.94■□□□□ 0.3
RN7SKP195-201ENST00000516587 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
RN7SKP195-201ENST00000516587 TRIM37O94972 964 aa16.93■□□□□ 0.3
RN7SKP195-201ENST00000516587 FAM9BQ8IZU0 186 aa16.93■□□□□ 0.3
RN7SKP195-201ENST00000516587 SYTL4Q96C24 671 aaPredicted RBP16.93■□□□□ 0.3
RN7SKP195-201ENST00000516587 KAT6BQ8WYB5 2073 aa16.93■□□□□ 0.3
RN7SKP195-201ENST00000516587 MPRIPQ6WCQ1 1025 aa16.92■□□□□ 0.3
RN7SKP195-201ENST00000516587 CCDC146Q8IYE0 955 aa16.92■□□□□ 0.3
RN7SKP195-201ENST00000516587 NGEFQ8N5V2 710 aa16.92■□□□□ 0.3
RN7SKP195-201ENST00000516587 TMOD3Q9NYL9 352 aa16.92■□□□□ 0.3
RN7SKP195-201ENST00000516587 BAG6P46379 1132 aa16.91■□□□□ 0.3
RN7SKP195-201ENST00000516587 PRIM1P49642 420 aaKnown RBP16.91■□□□□ 0.3
RN7SKP195-201ENST00000516587 CABP4P57796 275 aa16.91■□□□□ 0.3
RN7SKP195-201ENST00000516587 ACSBG1Q96GR2 724 aa16.91■□□□□ 0.3
RN7SKP195-201ENST00000516587 ADAMTS7Q9UKP4 1686 aa16.91■□□□□ 0.3
RN7SKP195-201ENST00000516587 EP400Q96L91 3159 aa16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 TMPOP42166 694 aaKnown RBP16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 RIPK4P57078 832 aa16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 TEFQ10587 303 aa16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 NCBP3Q53F19 620 aaKnown RBP16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 UPF1Q92900 1129 aaKnown RBP eCLIP16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 VIRMAQ69YN4 1812 aaKnown RBP16.9■□□□□ 0.3
RN7SKP195-201ENST00000516587 ITGB4P16144 1822 aa16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 KDM6AO15550 1401 aaPredicted RBP16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 SOCS7O14512 581 aa16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 SMARCC1Q92922 1105 aaPredicted RBP16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 TNS1Q9HBL0 1735 aaKnown RBP16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 TOGARAM1Q9Y4F4 1720 aa16.89■□□□□ 0.29
RN7SKP195-201ENST00000516587 RGPD3A6NKT7 1758 aaPredicted RBP16.88■□□□□ 0.29
RN7SKP195-201ENST00000516587 RGPD4Q7Z3J3 1758 aa16.88■□□□□ 0.29
RN7SKP195-201ENST00000516587 APBA3O96018 575 aa16.88■□□□□ 0.29
RN7SKP195-201ENST00000516587 CALD1Q05682 793 aaKnown RBP16.88■□□□□ 0.29
RN7SKP195-201ENST00000516587 SLC52A2Q9HAB3 445 aa16.88■□□□□ 0.29
RN7SKP195-201ENST00000516587 CEMIPQ8WUJ3 1361 aa16.88■□□□□ 0.29
RN7SKP195-201ENST00000516587 MRC1P22897 1456 aa16.87■□□□□ 0.29
RN7SKP195-201ENST00000516587 BTAF1O14981 1849 aa16.87■□□□□ 0.29
RN7SKP195-201ENST00000516587 APAF1O14727 1248 aa16.87■□□□□ 0.29
RN7SKP195-201ENST00000516587 PLSCR1O15162 318 aa16.87■□□□□ 0.29
RN7SKP195-201ENST00000516587 KCNQ2O43526 872 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms