RNA–Protein interactions for RNA: ENST00000516222.1

RNU6-561P-201, Transcript of RNA, U6 small nuclear 561, pseudogene, humanhuman

BASIC

Gene RNU6-561P, Length 102 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-561P-201ENST00000516222 SENP3-EIF4A1A0A087X0R7 540 aa4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 PIK3R2O00459 728 aa4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 RNF144AP50876 292 aaPredicted RBP4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 ALYREFQ86V81 257 aaKnown RBP4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 SEPT12Q8IYM1 358 aa4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 ZNF784Q8NCA9 323 aaPredicted RBP4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 NLRP3Q96P20 1036 aa4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 SPOCK3Q9BQ16 436 aa4.42□□□□□ -1.7
RNU6-561P-201ENST00000516222 IGF1RP08069 1367 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 ERVH48-1M5A8F1 160 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 MX2P20592 715 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 GPC1P35052 558 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 NR6A1Q15406 480 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 SLC27A3Q5K4L6 730 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 TMPRSS4Q9NRS4 437 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 DYRK1BQ9Y463 629 aa4.41□□□□□ -1.7
RNU6-561P-201ENST00000516222 ATP5J2-PTCD1G3V325 749 aa4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 K7ELQ4 463 aaPredicted RBP4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 MEN1O00255 615 aa4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 GAS6Q14393 721 aa4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 LRRN4Q8WUT4 740 aa4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 ZNF592Q92610 1267 aa4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 GAS2L1Q99501 681 aaPredicted RBP4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 PHF24Q9UPV7 400 aa4.4□□□□□ -1.71
RNU6-561P-201ENST00000516222 AP1G2O75843 785 aa4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 RHOQP17081 205 aa4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 ADD1P35611 737 aaKnown RBP4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 MAP2K3P46734 347 aa4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 SKIV2LQ15477 1246 aaKnown RBP4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 XP32Q5T750 250 aa4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 RNF20Q5VTR2 975 aa4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 FOXD4L5Q5VV16 416 aaPredicted RBP4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 GTPBP3Q969Y2 492 aaKnown RBP4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 ZNF837Q96EG3 531 aaPredicted RBP4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 MKL2Q9ULH7 1088 aa4.39□□□□□ -1.71
RNU6-561P-201ENST00000516222 GPR25O00155 361 aa4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 LILRA1O75019 489 aa4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 GTF2E1P29083 439 aaPredicted RBP4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 DBN1Q16643 649 aa4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 WDR44Q5JSH3 913 aa4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 RRAGCQ9HB90 399 aa4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 CYLDQ9NQC7 956 aa4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 CUEDC1Q9NWM3 386 aaPredicted RBP4.38□□□□□ -1.71
RNU6-561P-201ENST00000516222 OIP5O43482 229 aa4.37□□□□□ -1.71
RNU6-561P-201ENST00000516222 MCCD1P59942 119 aaPredicted RBP4.37□□□□□ -1.71
RNU6-561P-201ENST00000516222 ACDQ96AP0 544 aa4.37□□□□□ -1.71
RNU6-561P-201ENST00000516222 OXCT2Q9BYC2 517 aaPredicted RBP4.37□□□□□ -1.71
RNU6-561P-201ENST00000516222 TIMMDC1Q9NPL8 285 aa4.37□□□□□ -1.71
RNU6-561P-201ENST00000516222 A0A1W2PRU2 124 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 ESPNB1AK53 854 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 F11P03951 625 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 POU4F2Q12837 409 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 CYP2U1Q7Z449 544 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 DDRGK1Q96HY6 314 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 CFHR5Q9BXR6 569 aa4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 NUCKS1Q9H1E3 243 aaKnown RBP4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 GDF2Q9UK05 429 aaPredicted RBP4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 ZNF330Q9Y3S2 320 aaPredicted RBP4.36□□□□□ -1.71
RNU6-561P-201ENST00000516222 PROCP04070 461 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 CSB-PGBD3P0DP91 1061 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 AMPD1P23109 780 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 BAG6P46379 1132 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 SH3D19Q5HYK7 790 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 CC2D2BQ6DHV5 1058 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 TAS1R3Q7RTX0 852 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 PGBD3Q8N328 593 aa4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 KDF1Q8NAX2 398 aaPredicted RBP4.35□□□□□ -1.71
RNU6-561P-201ENST00000516222 NBPF10Q6P3W6 841 aaKnown RBP4.34□□□□□ -1.71
RNU6-561P-201ENST00000516222 NBPF15Q8N660 670 aa4.34□□□□□ -1.71
RNU6-561P-201ENST00000516222 GOLGA6L1Q8N7Z2 621 aa4.34□□□□□ -1.71
RNU6-561P-201ENST00000516222 OCSTAMPQ9BR26 566 aa4.34□□□□□ -1.71
RNU6-561P-201ENST00000516222 SLC24A3Q9HC58 644 aa4.34□□□□□ -1.71
RNU6-561P-201ENST00000516222 PCDHB9Q9Y5E1 797 aa4.34□□□□□ -1.71
RNU6-561P-201ENST00000516222 ZBBXA8MT70 800 aa4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 SPATA31C2B4DYI2 1134 aa4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 WASLO00401 505 aaPredicted RBP4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 GIGYF1O75420 1035 aaPredicted RBP4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 CLN3Q13286 438 aa4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 LBRQ14739 615 aaKnown RBP4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 EDARADDQ8WWZ3 215 aa4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 GRIP2Q9C0E4 1043 aa4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 NOP53Q9NZM5 478 aaKnown RBP4.33□□□□□ -1.72
RNU6-561P-201ENST00000516222 A0A1B0GTH6 734 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 KRBA1A5PL33 1030 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 FURINP09958 794 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 USP17L8P0C7I0 530 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 ERVK-9P63128 1117 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 GRIN2CQ14957 1233 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 EFHC2Q5JST6 749 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 GNASQ5JWF2 1037 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 Q8N3U1 123 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 PROCA1Q8NCQ7 364 aaPredicted RBP4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 KLRG1Q96E93 195 aa4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.32□□□□□ -1.72
RNU6-561P-201ENST00000516222 GNB5O14775 395 aa4.31□□□□□ -1.72
RNU6-561P-201ENST00000516222 MYCP01106 439 aaPredicted RBP4.31□□□□□ -1.72
RNU6-561P-201ENST00000516222 BMP4P12644 408 aa4.31□□□□□ -1.72
RNU6-561P-201ENST00000516222 SNRPNP63162 240 aaKnown RBP4.31□□□□□ -1.72
RNU6-561P-201ENST00000516222 TMEM259Q4ZIN3 620 aa4.31□□□□□ -1.72
RNU6-561P-201ENST00000516222 GNRH1P01148 92 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms