RNA–Protein interactions for RNA: ENST00000515863.1

ATR-210, Transcript of ATR serine/threonine kinase, humanhuman

TSL 2

Gene ATR, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATR-210ENST00000515863 SLC10A4Q96EP9 437 aa9.73□□□□□ -0.85
ATR-210ENST00000515863 HMX1Q9NP08 348 aaPredicted RBP9.73□□□□□ -0.85
ATR-210ENST00000515863 UPP2O95045 317 aa9.72□□□□□ -0.85
ATR-210ENST00000515863 NPAS3Q8IXF0 933 aa9.72□□□□□ -0.85
ATR-210ENST00000515863 LINC00528Q8N1L1 170 aa9.72□□□□□ -0.85
ATR-210ENST00000515863 EMILIN1Q9Y6C2 1016 aa9.72□□□□□ -0.85
ATR-210ENST00000515863 BMP2P12643 396 aa9.71□□□□□ -0.86
ATR-210ENST00000515863 PTK2Q05397 1052 aa9.71□□□□□ -0.86
ATR-210ENST00000515863 PCMTD1Q96MG8 357 aaPredicted RBP9.71□□□□□ -0.86
ATR-210ENST00000515863 GOPCQ9HD26 462 aa9.71□□□□□ -0.86
ATR-210ENST00000515863 INSM1Q01101 510 aaPredicted RBP9.7□□□□□ -0.86
ATR-210ENST00000515863 FAM69CQ0P6D2 419 aa9.7□□□□□ -0.86
ATR-210ENST00000515863 IL27Q8NEV9 243 aa9.7□□□□□ -0.86
ATR-210ENST00000515863 KCTD15Q96SI1 283 aaPredicted RBP9.7□□□□□ -0.86
ATR-210ENST00000515863 OCSTAMPQ9BR26 566 aa9.7□□□□□ -0.86
ATR-210ENST00000515863 CDV3Q9UKY7 258 aaKnown RBP9.7□□□□□ -0.86
ATR-210ENST00000515863 UHRF1BP1LA0JNW5 1464 aa9.7□□□□□ -0.86
ATR-210ENST00000515863 MAN1A2O60476 641 aa9.69□□□□□ -0.86
ATR-210ENST00000515863 IGF1RP08069 1367 aa9.69□□□□□ -0.86
ATR-210ENST00000515863 PPP1R26Q5T8A7 1209 aaPredicted RBP9.69□□□□□ -0.86
ATR-210ENST00000515863 PNMA1Q8ND90 353 aa9.69□□□□□ -0.86
ATR-210ENST00000515863 GPSM3Q9Y4H4 160 aa9.69□□□□□ -0.86
ATR-210ENST00000515863 ABCC2Q92887 1545 aa9.68□□□□□ -0.86
ATR-210ENST00000515863 H3BM21 787 aa9.68□□□□□ -0.86
ATR-210ENST00000515863 ADAM32Q8TC27 787 aa9.68□□□□□ -0.86
ATR-210ENST00000515863 IRF7Q92985 503 aa9.68□□□□□ -0.86
ATR-210ENST00000515863 PGPEP1Q9NXJ5 209 aa9.68□□□□□ -0.86
ATR-210ENST00000515863 TSEN34Q9BSV6 310 aaKnown RBP9.67□□□□□ -0.86
ATR-210ENST00000515863 TSPOAP1O95153 1857 aa9.66□□□□□ -0.86
ATR-210ENST00000515863 GMPRP36959 345 aa9.66□□□□□ -0.86
ATR-210ENST00000515863 CBLBQ13191 982 aa9.66□□□□□ -0.86
ATR-210ENST00000515863 MAP3K4Q9Y6R4 1608 aa9.66□□□□□ -0.86
ATR-210ENST00000515863 PLB1Q6P1J6 1458 aa9.66□□□□□ -0.86
ATR-210ENST00000515863 SOS2Q07890 1332 aaPredicted RBP9.65□□□□□ -0.86
ATR-210ENST00000515863 DHX9Q08211 1270 aaKnown RBP9.65□□□□□ -0.86
ATR-210ENST00000515863 INTS6LQ5JSJ4 861 aaKnown RBP9.65□□□□□ -0.86
ATR-210ENST00000515863 ERBB4Q15303 1308 aa9.64□□□□□ -0.87
ATR-210ENST00000515863 BRPF1P55201 1214 aaPredicted RBP9.64□□□□□ -0.87
ATR-210ENST00000515863 TMEM259Q4ZIN3 620 aa9.64□□□□□ -0.87
ATR-210ENST00000515863 TRIM34Q9BYJ4 488 aa9.64□□□□□ -0.87
ATR-210ENST00000515863 KDM5BQ9UGL1 1544 aa9.64□□□□□ -0.87
ATR-210ENST00000515863 KIF27Q86VH2 1401 aa9.64□□□□□ -0.87
ATR-210ENST00000515863 NBPF20Q3BBV1 942 aa9.63□□□□□ -0.87
ATR-210ENST00000515863 Q6ZVU0 165 aa9.63□□□□□ -0.87
ATR-210ENST00000515863 STK17AQ9UEE5 414 aa9.63□□□□□ -0.87
ATR-210ENST00000515863 DNMT3LQ9UJW3 386 aa9.63□□□□□ -0.87
ATR-210ENST00000515863 TNIKQ9UKE5 1360 aa9.63□□□□□ -0.87
ATR-210ENST00000515863 DZIP3Q86Y13 1208 aaKnown RBP9.62□□□□□ -0.87
ATR-210ENST00000515863 PTPRGP23470 1445 aa9.62□□□□□ -0.87
ATR-210ENST00000515863 ASXL2Q76L83 1435 aa9.62□□□□□ -0.87
ATR-210ENST00000515863 IQGAP2Q13576 1575 aa9.62□□□□□ -0.87
ATR-210ENST00000515863 DISP1Q96F81 1524 aa9.61□□□□□ -0.87
ATR-210ENST00000515863 COL17A1Q9UMD9 1497 aaPredicted RBP9.61□□□□□ -0.87
ATR-210ENST00000515863 RAB15P59190 212 aa9.61□□□□□ -0.87
ATR-210ENST00000515863 ADGRL1O94910 1474 aa9.6□□□□□ -0.87
ATR-210ENST00000515863 TTLL8A6PVC2 850 aa9.6□□□□□ -0.87
ATR-210ENST00000515863 EPRSP07814 1512 aaKnown RBP9.6□□□□□ -0.87
ATR-210ENST00000515863 UGGT2Q9NYU1 1516 aa9.6□□□□□ -0.87
ATR-210ENST00000515863 CARMIL2Q6F5E8 1435 aa9.59□□□□□ -0.87
ATR-210ENST00000515863 TMPRSS4Q9NRS4 437 aa9.59□□□□□ -0.87
ATR-210ENST00000515863 UACAQ9BZF9 1416 aa9.58□□□□□ -0.88
ATR-210ENST00000515863 SPINT1O43278 529 aa9.58□□□□□ -0.88
ATR-210ENST00000515863 PPFIA3O75145 1194 aa9.58□□□□□ -0.88
ATR-210ENST00000515863 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
ATR-210ENST00000515863 AGBL1Q96MI9 1066 aa9.58□□□□□ -0.88
ATR-210ENST00000515863 TEX14Q8IWB6 1497 aa9.58□□□□□ -0.88
ATR-210ENST00000515863 FIGNL2A6NMB9 653 aa9.57□□□□□ -0.88
ATR-210ENST00000515863 RELBQ01201 579 aa9.57□□□□□ -0.88
ATR-210ENST00000515863 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.57□□□□□ -0.88
ATR-210ENST00000515863 ZNF784Q8NCA9 323 aaPredicted RBP9.57□□□□□ -0.88
ATR-210ENST00000515863 CARMIL1Q5VZK9 1371 aa9.57□□□□□ -0.88
ATR-210ENST00000515863 ZCCHC11Q5TAX3 1644 aaKnown RBP9.56□□□□□ -0.88
ATR-210ENST00000515863 HECW2Q9P2P5 1572 aa9.56□□□□□ -0.88
ATR-210ENST00000515863 ERVH48-1M5A8F1 160 aa9.56□□□□□ -0.88
ATR-210ENST00000515863 VSIG8P0DPA2 414 aa9.56□□□□□ -0.88
ATR-210ENST00000515863 TPRNQ4KMQ1 711 aa9.56□□□□□ -0.88
ATR-210ENST00000515863 ZBBXA8MT70 800 aa9.55□□□□□ -0.88
ATR-210ENST00000515863 ESPNB1AK53 854 aa9.55□□□□□ -0.88
ATR-210ENST00000515863 ZSCAN1Q8NBB4 408 aa9.55□□□□□ -0.88
ATR-210ENST00000515863 KIAA0556O60303 1618 aa9.55□□□□□ -0.88
ATR-210ENST00000515863 MAGI3Q5TCQ9 1506 aa9.55□□□□□ -0.88
ATR-210ENST00000515863 SUPT5HO00267 1087 aaKnown RBP9.54□□□□□ -0.88
ATR-210ENST00000515863 FBXO45P0C2W1 286 aa9.54□□□□□ -0.88
ATR-210ENST00000515863 PTSQ03393 145 aa9.54□□□□□ -0.88
ATR-210ENST00000515863 CFAP43Q8NDM7 1665 aa9.54□□□□□ -0.88
ATR-210ENST00000515863 LORP23490 312 aaPredicted RBP9.53□□□□□ -0.88
ATR-210ENST00000515863 CTSOP43234 321 aaPredicted RBP9.53□□□□□ -0.88
ATR-210ENST00000515863 INSM2Q96T92 566 aaPredicted RBP9.53□□□□□ -0.88
ATR-210ENST00000515863 ZNF395Q9H8N7 513 aaPredicted RBP9.53□□□□□ -0.88
ATR-210ENST00000515863 PCDHB9Q9Y5E1 797 aa9.53□□□□□ -0.88
ATR-210ENST00000515863 LILRA1O75019 489 aa9.52□□□□□ -0.89
ATR-210ENST00000515863 ADH1AP07327 375 aa9.52□□□□□ -0.89
ATR-210ENST00000515863 ADD1P35611 737 aaKnown RBP9.52□□□□□ -0.89
ATR-210ENST00000515863 SEPT12Q8IYM1 358 aa9.52□□□□□ -0.89
ATR-210ENST00000515863 POLMQ9NP87 494 aaPredicted RBP9.52□□□□□ -0.89
ATR-210ENST00000515863 WDR7Q9Y4E6 1490 aa9.52□□□□□ -0.89
ATR-210ENST00000515863 FAM181BA6NEQ2 426 aa9.51□□□□□ -0.89
ATR-210ENST00000515863 BANK1Q8NDB2 785 aa9.51□□□□□ -0.89
ATR-210ENST00000515863 ABCA8O94911 1581 aa9.5□□□□□ -0.89
ATR-210ENST00000515863 GIGYF1O75420 1035 aaPredicted RBP9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms