RNA–Protein interactions for RNA: ENST00000515753.1

HERC4-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 589 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-215ENST00000515753 ZBBXA8MT70 800 aa7.51□□□□□ -1.21
HERC4-215ENST00000515753 MEN1O00255 615 aa7.51□□□□□ -1.21
HERC4-215ENST00000515753 ADAMTS2O95450 1211 aa7.51□□□□□ -1.21
HERC4-215ENST00000515753 SEPT12Q8IYM1 358 aa7.51□□□□□ -1.21
HERC4-215ENST00000515753 ATP5J2-PTCD1G3V325 749 aa7.5□□□□□ -1.21
HERC4-215ENST00000515753 ARHGEF15O94989 841 aa7.5□□□□□ -1.21
HERC4-215ENST00000515753 RNF144AP50876 292 aaPredicted RBP7.5□□□□□ -1.21
HERC4-215ENST00000515753 TMEM259Q4ZIN3 620 aa7.5□□□□□ -1.21
HERC4-215ENST00000515753 LYPD4Q6UWN0 246 aa7.5□□□□□ -1.21
HERC4-215ENST00000515753 GJD4Q96KN9 370 aaPredicted RBP7.5□□□□□ -1.21
HERC4-215ENST00000515753 RNF225M0QZC1 329 aaPredicted RBP7.49□□□□□ -1.21
HERC4-215ENST00000515753 GPR25O00155 361 aa7.49□□□□□ -1.21
HERC4-215ENST00000515753 IRS1P35568 1242 aa7.49□□□□□ -1.21
HERC4-215ENST00000515753 BRPF1P55201 1214 aaPredicted RBP7.49□□□□□ -1.21
HERC4-215ENST00000515753 GAS6Q14393 721 aa7.49□□□□□ -1.21
HERC4-215ENST00000515753 NEUROD2Q15784 382 aa7.49□□□□□ -1.21
HERC4-215ENST00000515753 A0A1W2PRU2 124 aa7.48□□□□□ -1.21
HERC4-215ENST00000515753 PRKCSHP14314 528 aaPredicted RBP7.48□□□□□ -1.21
HERC4-215ENST00000515753 MARSP56192 900 aaKnown RBP7.48□□□□□ -1.21
HERC4-215ENST00000515753 RIPOR1Q6ZS17 1223 aa7.48□□□□□ -1.21
HERC4-215ENST00000515753 GOPCQ9HD26 462 aa7.48□□□□□ -1.21
HERC4-215ENST00000515753 SCTRP47872 440 aa7.47□□□□□ -1.21
HERC4-215ENST00000515753 POU4F2Q12837 409 aa7.47□□□□□ -1.21
HERC4-215ENST00000515753 ZNF837Q96EG3 531 aaPredicted RBP7.47□□□□□ -1.21
HERC4-215ENST00000515753 SRSF11Q05519 484 aaKnown RBP7.46□□□□□ -1.22
HERC4-215ENST00000515753 DBN1Q16643 649 aa7.46□□□□□ -1.22
HERC4-215ENST00000515753 CC2D2BQ6DHV5 1058 aa7.46□□□□□ -1.22
HERC4-215ENST00000515753 GAS2L1Q99501 681 aaPredicted RBP7.46□□□□□ -1.22
HERC4-215ENST00000515753 CELA2BP08218 269 aaPredicted RBP7.45□□□□□ -1.22
HERC4-215ENST00000515753 ERVK-9P63128 1117 aa7.45□□□□□ -1.22
HERC4-215ENST00000515753 SLC27A3Q5K4L6 730 aa7.45□□□□□ -1.22
HERC4-215ENST00000515753 NLRP3Q96P20 1036 aa7.45□□□□□ -1.22
HERC4-215ENST00000515753 MAP3K10Q02779 954 aa7.44□□□□□ -1.22
HERC4-215ENST00000515753 GPAT2Q6NUI2 795 aa7.44□□□□□ -1.22
HERC4-215ENST00000515753 TRIM22Q8IYM9 498 aa7.44□□□□□ -1.22
HERC4-215ENST00000515753 GTPBP3Q969Y2 492 aaKnown RBP7.44□□□□□ -1.22
HERC4-215ENST00000515753 PCDHB11Q9Y5F2 797 aa7.44□□□□□ -1.22
HERC4-215ENST00000515753 NR1H3Q13133 447 aa7.43□□□□□ -1.22
HERC4-215ENST00000515753 TRIM52Q96A61 297 aa7.43□□□□□ -1.22
HERC4-215ENST00000515753 ARHGEF10LQ9HCE6 1279 aa7.43□□□□□ -1.22
HERC4-215ENST00000515753 RAB6BQ9NRW1 208 aa7.43□□□□□ -1.22
HERC4-215ENST00000515753 GPC1P35052 558 aa7.42□□□□□ -1.22
HERC4-215ENST00000515753 RNF20Q5VTR2 975 aa7.42□□□□□ -1.22
HERC4-215ENST00000515753 SCARF2Q96GP6 870 aaPredicted RBP7.42□□□□□ -1.22
HERC4-215ENST00000515753 OSBPL3Q9H4L5 887 aa7.42□□□□□ -1.22
HERC4-215ENST00000515753 MBIPQ9NS73 344 aa7.42□□□□□ -1.22
HERC4-215ENST00000515753 DYRK1BQ9Y463 629 aa7.42□□□□□ -1.22
HERC4-215ENST00000515753 IGF1RP08069 1367 aa7.42□□□□□ -1.22
HERC4-215ENST00000515753 GPR37L1O60883 481 aa7.41□□□□□ -1.22
HERC4-215ENST00000515753 CLN3Q13286 438 aa7.41□□□□□ -1.22
HERC4-215ENST00000515753 NBPF10Q6P3W6 841 aaKnown RBP7.41□□□□□ -1.22
HERC4-215ENST00000515753 FOXR1Q6PIV2 292 aa7.41□□□□□ -1.22
HERC4-215ENST00000515753 CYP2U1Q7Z449 544 aa7.41□□□□□ -1.22
HERC4-215ENST00000515753 NBPF15Q8N660 670 aa7.41□□□□□ -1.22
HERC4-215ENST00000515753 GRIP2Q9C0E4 1043 aa7.41□□□□□ -1.22
HERC4-215ENST00000515753 MTMR14Q8NCE2 650 aa7.4□□□□□ -1.22
HERC4-215ENST00000515753 ESF1Q9H501 851 aaKnown RBP7.4□□□□□ -1.22
HERC4-215ENST00000515753 SNRKQ9NRH2 765 aa7.4□□□□□ -1.22
HERC4-215ENST00000515753 DNMT3AQ9Y6K1 912 aaPredicted RBP7.4□□□□□ -1.22
HERC4-215ENST00000515753 CNTNAP5Q8WYK1 1306 aa7.4□□□□□ -1.22
HERC4-215ENST00000515753 TRAK2O60296 914 aa7.39□□□□□ -1.23
HERC4-215ENST00000515753 KANK3Q6NY19 840 aa7.39□□□□□ -1.23
HERC4-215ENST00000515753 GMCL1Q96IK5 515 aa7.39□□□□□ -1.23
HERC4-215ENST00000515753 TIMMDC1Q9NPL8 285 aa7.39□□□□□ -1.23
HERC4-215ENST00000515753 H7C1W4 665 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 PHKA2P46019 1235 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 CCDC125Q86Z20 511 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 ACDQ96AP0 544 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 TRERF1Q96PN7 1200 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 CDCA7Q9BWT1 371 aaPredicted RBP7.38□□□□□ -1.23
HERC4-215ENST00000515753 ENAMQ9NRM1 1142 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 ZNF330Q9Y3S2 320 aaPredicted RBP7.38□□□□□ -1.23
HERC4-215ENST00000515753 NDUFB9Q9Y6M9 179 aa7.38□□□□□ -1.23
HERC4-215ENST00000515753 WASLO00401 505 aaPredicted RBP7.37□□□□□ -1.23
HERC4-215ENST00000515753 BCRP11274 1271 aa7.37□□□□□ -1.23
HERC4-215ENST00000515753 MCCD1P59942 119 aaPredicted RBP7.37□□□□□ -1.23
HERC4-215ENST00000515753 TAS1R3Q7RTX0 852 aa7.37□□□□□ -1.23
HERC4-215ENST00000515753 NEDD1Q8NHV4 660 aa7.37□□□□□ -1.23
HERC4-215ENST00000515753 CNKSR1Q969H4 720 aa7.37□□□□□ -1.23
HERC4-215ENST00000515753 GPAMQ9HCL2 828 aa7.37□□□□□ -1.23
HERC4-215ENST00000515753 SPATA31C2B4DYI2 1134 aa7.36□□□□□ -1.23
HERC4-215ENST00000515753 IL2RAP01589 272 aa7.36□□□□□ -1.23
HERC4-215ENST00000515753 F11P03951 625 aa7.36□□□□□ -1.23
HERC4-215ENST00000515753 MX2P20592 715 aa7.36□□□□□ -1.23
HERC4-215ENST00000515753 CENPCQ03188 943 aa7.36□□□□□ -1.23
HERC4-215ENST00000515753 BANK1Q8NDB2 785 aa7.36□□□□□ -1.23
HERC4-215ENST00000515753 CCDC85AQ96PX6 553 aaPredicted RBP7.36□□□□□ -1.23
HERC4-215ENST00000515753 NUCKS1Q9H1E3 243 aaKnown RBP7.36□□□□□ -1.23
HERC4-215ENST00000515753 THBS1P07996 1170 aa7.35□□□□□ -1.23
HERC4-215ENST00000515753 TSGA10IPQ3SY00 556 aa7.35□□□□□ -1.23
HERC4-215ENST00000515753 ESYT1Q9BSJ8 1104 aa7.35□□□□□ -1.23
HERC4-215ENST00000515753 CEP126Q9P2H0 1117 aa7.35□□□□□ -1.23
HERC4-215ENST00000515753 STAU1O95793 577 aaKnown RBP7.34□□□□□ -1.23
HERC4-215ENST00000515753 GNRH1P01148 92 aa7.34□□□□□ -1.23
HERC4-215ENST00000515753 WDR44Q5JSH3 913 aa7.34□□□□□ -1.23
HERC4-215ENST00000515753 MYCP01106 439 aaPredicted RBP7.33□□□□□ -1.24
HERC4-215ENST00000515753 ZNF592Q92610 1267 aa7.33□□□□□ -1.24
HERC4-215ENST00000515753 ZSCAN10Q96SZ4 725 aaPredicted RBP7.33□□□□□ -1.24
HERC4-215ENST00000515753 PHF20L1A8MW92 1017 aa7.32□□□□□ -1.24
HERC4-215ENST00000515753 IGHA1P01876 353 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms