RNA–Protein interactions for RNA: ENST00000515736.2

SFXN1-211, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 453 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-211ENST00000515736 KCNK17Q96T54 332 aa11.55□□□□□ -0.56
SFXN1-211ENST00000515736 MTMR7Q9Y216 660 aa11.55□□□□□ -0.56
SFXN1-211ENST00000515736 PLA2R1Q13018 1463 aa11.55□□□□□ -0.56
SFXN1-211ENST00000515736 ZNF335Q9H4Z2 1342 aaPredicted RBP11.55□□□□□ -0.56
SFXN1-211ENST00000515736 POLR1AO95602 1720 aaPredicted RBP11.55□□□□□ -0.56
SFXN1-211ENST00000515736 CFAP99D6REC4 459 aa11.54□□□□□ -0.56
SFXN1-211ENST00000515736 CSB-PGBD3P0DP91 1061 aa11.54□□□□□ -0.56
SFXN1-211ENST00000515736 KCNA1Q09470 495 aa11.54□□□□□ -0.56
SFXN1-211ENST00000515736 CCDC141Q6ZP82 1450 aa11.54□□□□□ -0.56
SFXN1-211ENST00000515736 MBD5Q9P267 1494 aa11.53□□□□□ -0.56
SFXN1-211ENST00000515736 PALM3A6NDB9 673 aaPredicted RBP11.53□□□□□ -0.56
SFXN1-211ENST00000515736 ILDR2Q71H61 639 aa11.53□□□□□ -0.56
SFXN1-211ENST00000515736 TSC1Q92574 1164 aa11.53□□□□□ -0.56
SFXN1-211ENST00000515736 RRP7BPQ9NSQ0 103 aa11.53□□□□□ -0.56
SFXN1-211ENST00000515736 A2ML1A8K2U0 1454 aa11.52□□□□□ -0.56
SFXN1-211ENST00000515736 RPRD2Q5VT52 1461 aaKnown RBP11.52□□□□□ -0.56
SFXN1-211ENST00000515736 UBAP1LF5GYI3 381 aa11.52□□□□□ -0.57
SFXN1-211ENST00000515736 EPS8L1Q8TE68 723 aa11.52□□□□□ -0.57
SFXN1-211ENST00000515736 ZBED2Q9BTP6 218 aa11.52□□□□□ -0.57
SFXN1-211ENST00000515736 RTEL1-TNFRSF6BF6WH68 1400 aa11.52□□□□□ -0.57
SFXN1-211ENST00000515736 KIF3BO15066 747 aa11.51□□□□□ -0.57
SFXN1-211ENST00000515736 HOXB1P14653 301 aaPredicted RBP11.51□□□□□ -0.57
SFXN1-211ENST00000515736 SIN3AQ96ST3 1273 aa11.51□□□□□ -0.57
SFXN1-211ENST00000515736 DHX29Q7Z478 1369 aaKnown RBP11.51□□□□□ -0.57
SFXN1-211ENST00000515736 SOX11P35716 441 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 NEUROD1Q13562 356 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 UCN2Q96RP3 112 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 MPHOSPH9Q99550 1183 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 CHIC2Q9UKJ5 165 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 ANKRD50Q9ULJ7 1429 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 UNC13BO14795 1591 aa11.5□□□□□ -0.57
SFXN1-211ENST00000515736 C6orf229H3BNL8 230 aa11.49□□□□□ -0.57
SFXN1-211ENST00000515736 LMOD1P29536 600 aaPredicted RBP11.49□□□□□ -0.57
SFXN1-211ENST00000515736 GRIPAP1Q4V328 841 aa11.49□□□□□ -0.57
SFXN1-211ENST00000515736 TNRQ92752 1358 aa11.49□□□□□ -0.57
SFXN1-211ENST00000515736 ANKRD30BQ9BXX2 1392 aa11.49□□□□□ -0.57
SFXN1-211ENST00000515736 PZPP20742 1482 aa11.49□□□□□ -0.57
SFXN1-211ENST00000515736 POTEB2H3BUK9 544 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 TSPY4P0CV99 314 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 TSPY10P0CW01 314 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 FUT2Q10981 343 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 PRR7Q8TB68 274 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 TRIM52Q96A61 297 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 TFIP11Q9UBB9 837 aaKnown RBP11.48□□□□□ -0.57
SFXN1-211ENST00000515736 WASHC2CQ9Y4E1 1318 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 FAM135AQ9P2D6 1515 aa11.48□□□□□ -0.57
SFXN1-211ENST00000515736 SLF2Q8IX21 1173 aa11.47□□□□□ -0.57
SFXN1-211ENST00000515736 RABGEF1Q9UJ41 708 aa11.47□□□□□ -0.57
SFXN1-211ENST00000515736 CARNS1A5YM72 827 aa11.46□□□□□ -0.57
SFXN1-211ENST00000515736 SCUBE2Q9NQ36 999 aa11.46□□□□□ -0.57
SFXN1-211ENST00000515736 CFAP65Q6ZU64 1925 aaKnown RBP11.46□□□□□ -0.58
SFXN1-211ENST00000515736 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
SFXN1-211ENST00000515736 ATG7O95352 703 aa11.45□□□□□ -0.58
SFXN1-211ENST00000515736 HDGFP51858 240 aaKnown RBP11.45□□□□□ -0.58
SFXN1-211ENST00000515736 NR6A1Q15406 480 aa11.45□□□□□ -0.58
SFXN1-211ENST00000515736 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
SFXN1-211ENST00000515736 CPS1P31327 1500 aa11.45□□□□□ -0.58
SFXN1-211ENST00000515736 DUOX2Q9NRD8 1548 aa11.45□□□□□ -0.58
SFXN1-211ENST00000515736 ZC3H13Q5T200 1668 aaKnown RBP11.44□□□□□ -0.58
SFXN1-211ENST00000515736 SLC4A3P48751 1232 aa11.44□□□□□ -0.58
SFXN1-211ENST00000515736 PIP4K2BP78356 416 aa11.44□□□□□ -0.58
SFXN1-211ENST00000515736 FOXD4L5Q5VV16 416 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-211ENST00000515736 FOXD4L4Q8WXT5 416 aaPredicted RBP11.44□□□□□ -0.58
SFXN1-211ENST00000515736 SYMPKQ92797 1274 aaKnown RBP11.44□□□□□ -0.58
SFXN1-211ENST00000515736 IQGAP3Q86VI3 1631 aa11.44□□□□□ -0.58
SFXN1-211ENST00000515736 CEP152O94986 1710 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 KIF15Q9NS87 1388 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 RNF17Q9BXT8 1623 aaKnown RBP11.43□□□□□ -0.58
SFXN1-211ENST00000515736 UGGT1Q9NYU2 1555 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 ATP6V1AP38606 617 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 SEMA3FQ13275 785 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 ANKLE2Q86XL3 938 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 SP7Q8TDD2 431 aaPredicted RBP11.43□□□□□ -0.58
SFXN1-211ENST00000515736 MAFBQ9Y5Q3 323 aaPredicted RBP11.43□□□□□ -0.58
SFXN1-211ENST00000515736 NLRP1Q9C000 1473 aa11.43□□□□□ -0.58
SFXN1-211ENST00000515736 TMEM88BA6NKF7 163 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 PER1O15534 1290 aaPredicted RBP11.42□□□□□ -0.58
SFXN1-211ENST00000515736 CFHP08603 1231 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 PSEN2P49810 448 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 MAMSTRQ6ZN01 415 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 THEMISQ8N1K5 641 aaPredicted RBP11.42□□□□□ -0.58
SFXN1-211ENST00000515736 SLC4A5Q9BY07 1137 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 IQGAP1P46940 1657 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 ERBINQ96RT1 1412 aa11.42□□□□□ -0.58
SFXN1-211ENST00000515736 EIF2AK4Q9P2K8 1649 aaKnown RBP11.42□□□□□ -0.58
SFXN1-211ENST00000515736 SNPHO15079 494 aa11.41□□□□□ -0.58
SFXN1-211ENST00000515736 TOM1O60784 492 aa11.41□□□□□ -0.58
SFXN1-211ENST00000515736 FAM98CQ17RN3 349 aaKnown RBP11.41□□□□□ -0.58
SFXN1-211ENST00000515736 VRTNQ9H8Y1 702 aa11.41□□□□□ -0.58
SFXN1-211ENST00000515736 DEPDC5O75140 1603 aa11.41□□□□□ -0.58
SFXN1-211ENST00000515736 NPHP4O75161 1426 aaPredicted RBP11.41□□□□□ -0.58
SFXN1-211ENST00000515736 ABCC3O15438 1527 aa11.4□□□□□ -0.58
SFXN1-211ENST00000515736 CDCA8Q53HL2 280 aa11.4□□□□□ -0.58
SFXN1-211ENST00000515736 PNMA1Q8ND90 353 aa11.4□□□□□ -0.58
SFXN1-211ENST00000515736 VWDEQ8N2E2 1590 aa11.4□□□□□ -0.58
SFXN1-211ENST00000515736 HSPA1LP34931 641 aa11.39□□□□□ -0.59
SFXN1-211ENST00000515736 TBC1D9Q6ZT07 1266 aa11.39□□□□□ -0.59
SFXN1-211ENST00000515736 SAMD7Q7Z3H4 446 aa11.39□□□□□ -0.59
SFXN1-211ENST00000515736 RETREG3Q86VR2 466 aa11.39□□□□□ -0.59
SFXN1-211ENST00000515736 EIF4G2P78344 907 aaKnown RBP eCLIP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms