RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 SULT6B1Q6IMI4 303 aa15.95■□□□□ 0.14
SNF8-215ENST00000515572 U2SURPO15042 1029 aaKnown RBP15.94■□□□□ 0.14
SNF8-215ENST00000515572 ZCRB1Q8TBF4 217 aaKnown RBP15.94■□□□□ 0.14
SNF8-215ENST00000515572 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNF8-215ENST00000515572 FAM196AQ6ZSG2 479 aa15.93■□□□□ 0.14
SNF8-215ENST00000515572 BCL9O00512 1426 aa15.93■□□□□ 0.14
SNF8-215ENST00000515572 SBF2Q86WG5 1849 aa15.92■□□□□ 0.14
SNF8-215ENST00000515572 AEBP1Q8IUX7 1158 aa15.92■□□□□ 0.14
SNF8-215ENST00000515572 SPG7Q9UQ90 795 aa15.92■□□□□ 0.14
SNF8-215ENST00000515572 PCDH11XQ9BZA7 1347 aa15.92■□□□□ 0.14
SNF8-215ENST00000515572 PCDH11YQ9BZA8 1340 aa15.92■□□□□ 0.14
SNF8-215ENST00000515572 MARCH10Q8NA82 808 aaPredicted RBP15.91■□□□□ 0.14
SNF8-215ENST00000515572 HMOX1P09601 288 aa15.9■□□□□ 0.14
SNF8-215ENST00000515572 U2AF1L5P0DN76 240 aaPredicted RBP15.9■□□□□ 0.14
SNF8-215ENST00000515572 U2AF1Q01081 240 aaKnown RBP eCLIP15.9■□□□□ 0.14
SNF8-215ENST00000515572 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
SNF8-215ENST00000515572 PLEKHO1Q53GL0 409 aaPredicted RBP15.9■□□□□ 0.14
SNF8-215ENST00000515572 FAM182BQ5T319 152 aa15.89■□□□□ 0.13
SNF8-215ENST00000515572 DDX54Q8TDD1 881 aaKnown RBP15.89■□□□□ 0.13
SNF8-215ENST00000515572 SOCS7O14512 581 aa15.88■□□□□ 0.13
SNF8-215ENST00000515572 FCHSD2O94868 740 aa15.88■□□□□ 0.13
SNF8-215ENST00000515572 CCDC125Q86Z20 511 aa15.88■□□□□ 0.13
SNF8-215ENST00000515572 NHSQ6T4R5 1651 aa15.87■□□□□ 0.13
SNF8-215ENST00000515572 DOT1LQ8TEK3 1739 aa15.87■□□□□ 0.13
SNF8-215ENST00000515572 TNS1Q9HBL0 1735 aaKnown RBP15.87■□□□□ 0.13
SNF8-215ENST00000515572 CYP27B1O15528 508 aa15.86■□□□□ 0.13
SNF8-215ENST00000515572 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
SNF8-215ENST00000515572 PNNQ9H307 717 aaKnown RBP15.86■□□□□ 0.13
SNF8-215ENST00000515572 PRKAR2BP31323 418 aa15.85■□□□□ 0.13
SNF8-215ENST00000515572 WDR43Q15061 677 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNF8-215ENST00000515572 IFNL2Q8IZJ0 200 aa15.85■□□□□ 0.13
SNF8-215ENST00000515572 UPF1Q92900 1129 aaKnown RBP eCLIP15.85■□□□□ 0.13
SNF8-215ENST00000515572 KAT6BQ8WYB5 2073 aa15.85■□□□□ 0.13
SNF8-215ENST00000515572 NEFMP07197 916 aa15.84■□□□□ 0.13
SNF8-215ENST00000515572 HSP90AB1P08238 724 aaKnown RBP15.84■□□□□ 0.13
SNF8-215ENST00000515572 PHKG2P15735 406 aa15.84■□□□□ 0.13
SNF8-215ENST00000515572 NKX1-1Q15270 411 aaPredicted RBP15.84■□□□□ 0.13
SNF8-215ENST00000515572 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
SNF8-215ENST00000515572 DIEXFQ68CQ4 756 aaKnown RBP15.84■□□□□ 0.13
SNF8-215ENST00000515572 ZNF530Q6P9A1 599 aaPredicted RBP15.84■□□□□ 0.13
SNF8-215ENST00000515572 VIRMAQ69YN4 1812 aaKnown RBP15.83■□□□□ 0.12
SNF8-215ENST00000515572 SF3B2Q13435 895 aaKnown RBP15.83■□□□□ 0.12
SNF8-215ENST00000515572 TOGARAM1Q9Y4F4 1720 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 ITGB4P16144 1822 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 EP400Q96L91 3159 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 TRIM37O94972 964 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 GAS2L2Q8NHY3 880 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 MRS2Q9HD23 443 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 SCN11AQ9UI33 1791 aa15.82■□□□□ 0.12
SNF8-215ENST00000515572 RGPD3A6NKT7 1758 aaPredicted RBP15.81■□□□□ 0.12
SNF8-215ENST00000515572 BTAF1O14981 1849 aa15.81■□□□□ 0.12
SNF8-215ENST00000515572 AKAP4Q5JQC9 854 aa15.81■□□□□ 0.12
SNF8-215ENST00000515572 RGPD4Q7Z3J3 1758 aa15.81■□□□□ 0.12
SNF8-215ENST00000515572 BCL11BQ9C0K0 894 aaPredicted RBP15.81■□□□□ 0.12
SNF8-215ENST00000515572 MTHFSDQ2M296 383 aaKnown RBP15.8■□□□□ 0.12
SNF8-215ENST00000515572 DCAF5Q96JK2 942 aa15.8■□□□□ 0.12
SNF8-215ENST00000515572 ADAMTS7Q9UKP4 1686 aa15.79■□□□□ 0.12
SNF8-215ENST00000515572 MAPK8IP3Q9UPT6 1336 aa15.79■□□□□ 0.12
SNF8-215ENST00000515572 CCDC184Q52MB2 194 aa15.79■□□□□ 0.12
SNF8-215ENST00000515572 ACSBG1Q96GR2 724 aa15.79■□□□□ 0.12
SNF8-215ENST00000515572 PHACTR3Q96KR7 559 aa15.79■□□□□ 0.12
SNF8-215ENST00000515572 PLEKHF1Q96S99 279 aa15.79■□□□□ 0.12
SNF8-215ENST00000515572 DLG5Q8TDM6 1919 aa15.78■□□□□ 0.12
SNF8-215ENST00000515572 ADAMTS8Q9UP79 889 aa15.78■□□□□ 0.12
SNF8-215ENST00000515572 KDM6AO15550 1401 aaPredicted RBP15.77■□□□□ 0.12
SNF8-215ENST00000515572 MAP3K5Q99683 1374 aa15.77■□□□□ 0.12
SNF8-215ENST00000515572 KCNQ2O43526 872 aa15.77■□□□□ 0.12
SNF8-215ENST00000515572 APBA3O96018 575 aa15.77■□□□□ 0.12
SNF8-215ENST00000515572 BAG6P46379 1132 aa15.77■□□□□ 0.12
SNF8-215ENST00000515572 PRIM1P49642 420 aaKnown RBP15.77■□□□□ 0.12
SNF8-215ENST00000515572 PNISRQ8TF01 805 aaKnown RBP15.77■□□□□ 0.12
SNF8-215ENST00000515572 SYTL4Q96C24 671 aaPredicted RBP15.77■□□□□ 0.12
SNF8-215ENST00000515572 GNAT3A8MTJ3 354 aa15.76■□□□□ 0.11
SNF8-215ENST00000515572 ERVV-2B6SEH9 535 aa15.76■□□□□ 0.11
SNF8-215ENST00000515572 CCER2I3L3R5 266 aa15.76■□□□□ 0.11
SNF8-215ENST00000515572 RUNDC1Q96C34 613 aa15.76■□□□□ 0.11
SNF8-215ENST00000515572 PTF1AQ7RTS3 328 aa15.75■□□□□ 0.11
SNF8-215ENST00000515572 MRC1P22897 1456 aa15.74■□□□□ 0.11
SNF8-215ENST00000515572 PLSCR1O15162 318 aa15.74■□□□□ 0.11
SNF8-215ENST00000515572 MPRIPQ6WCQ1 1025 aa15.74■□□□□ 0.11
SNF8-215ENST00000515572 TMOD3Q9NYL9 352 aa15.74■□□□□ 0.11
SNF8-215ENST00000515572 HTATSF1O43719 755 aaKnown RBP15.73■□□□□ 0.11
SNF8-215ENST00000515572 NFE2L2Q16236 605 aa15.73■□□□□ 0.11
SNF8-215ENST00000515572 LY75O60449 1722 aa15.73■□□□□ 0.11
SNF8-215ENST00000515572 RREB1Q92766 1687 aa15.73■□□□□ 0.11
SNF8-215ENST00000515572 SIPA1L3O60292 1781 aaPredicted RBP15.72■□□□□ 0.11
SNF8-215ENST00000515572 RNMTO43148 476 aaKnown RBP15.72■□□□□ 0.11
SNF8-215ENST00000515572 CABP4P57796 275 aa15.72■□□□□ 0.11
SNF8-215ENST00000515572 DEFB132Q7Z7B7 95 aa15.72■□□□□ 0.11
SNF8-215ENST00000515572 CCDC146Q8IYE0 955 aa15.72■□□□□ 0.11
SNF8-215ENST00000515572 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
SNF8-215ENST00000515572 PIGBQ92521 554 aa15.71■□□□□ 0.11
SNF8-215ENST00000515572 LGR6Q9HBX8 967 aa15.71■□□□□ 0.11
SNF8-215ENST00000515572 CEMIPQ8WUJ3 1361 aa15.71■□□□□ 0.11
SNF8-215ENST00000515572 TMPOP42166 694 aaKnown RBP15.7■□□□□ 0.1
SNF8-215ENST00000515572 EN1Q05925 392 aaPredicted RBP15.7■□□□□ 0.1
SNF8-215ENST00000515572 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
SNF8-215ENST00000515572 SMARCC1Q92922 1105 aaPredicted RBP15.7■□□□□ 0.1
SNF8-215ENST00000515572 CAMKK2Q96RR4 588 aa15.7■□□□□ 0.1
SNF8-215ENST00000515572 SLC52A2Q9HAB3 445 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms