RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 PTCD2Q8WV60 388 aaKnown RBP13.02□□□□□ -0.33
CDC42SE2-212ENST00000515533 HIRIP3Q9BW71 556 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-212ENST00000515533 KDM2AQ9Y2K7 1162 aa13.02□□□□□ -0.33
CDC42SE2-212ENST00000515533 MINK1Q8N4C8 1332 aaPredicted RBP13.02□□□□□ -0.33
CDC42SE2-212ENST00000515533 A0A0G2JS52 829 aa13.01□□□□□ -0.33
CDC42SE2-212ENST00000515533 MYT1Q01538 1121 aa13.01□□□□□ -0.33
CDC42SE2-212ENST00000515533 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
CDC42SE2-212ENST00000515533 STAC3Q96MF2 364 aa13□□□□□ -0.33
CDC42SE2-212ENST00000515533 RGPD1P0DJD0 1748 aa12.99□□□□□ -0.33
CDC42SE2-212ENST00000515533 KIAA1210Q9ULL0 1709 aa12.99□□□□□ -0.33
CDC42SE2-212ENST00000515533 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
CDC42SE2-212ENST00000515533 FAM83GA6ND36 823 aa12.98□□□□□ -0.33
CDC42SE2-212ENST00000515533 TK2O00142 265 aa12.98□□□□□ -0.33
CDC42SE2-212ENST00000515533 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
CDC42SE2-212ENST00000515533 FOXK1P85037 733 aa12.98□□□□□ -0.33
CDC42SE2-212ENST00000515533 KRT27Q7Z3Y8 459 aa12.98□□□□□ -0.33
CDC42SE2-212ENST00000515533 NGDNQ8NEJ9 315 aaKnown RBP12.98□□□□□ -0.33
CDC42SE2-212ENST00000515533 PRR36Q9H6K5 1346 aa12.97□□□□□ -0.33
CDC42SE2-212ENST00000515533 TOPAZ1Q8N9V7 1692 aa12.97□□□□□ -0.33
CDC42SE2-212ENST00000515533 DMRTA1Q5VZB9 504 aa12.97□□□□□ -0.33
CDC42SE2-212ENST00000515533 BTG4Q9NY30 223 aa12.97□□□□□ -0.33
CDC42SE2-212ENST00000515533 HRO43593 1189 aa12.96□□□□□ -0.33
CDC42SE2-212ENST00000515533 ONECUT3O60422 494 aaPredicted RBP12.96□□□□□ -0.33
CDC42SE2-212ENST00000515533 PSEN2P49810 448 aa12.96□□□□□ -0.33
CDC42SE2-212ENST00000515533 DEFB132Q7Z7B7 95 aa12.96□□□□□ -0.33
CDC42SE2-212ENST00000515533 PLPP6Q8IY26 295 aa12.96□□□□□ -0.33
CDC42SE2-212ENST00000515533 ATP7BP35670 1465 aa12.96□□□□□ -0.34
CDC42SE2-212ENST00000515533 FAM98CQ17RN3 349 aaKnown RBP12.95□□□□□ -0.34
CDC42SE2-212ENST00000515533 THSD7AQ9UPZ6 1657 aa12.94□□□□□ -0.34
CDC42SE2-212ENST00000515533 PRDM11Q9NQV5 511 aa12.94□□□□□ -0.34
CDC42SE2-212ENST00000515533 TNS1Q9HBL0 1735 aaKnown RBP12.93□□□□□ -0.34
CDC42SE2-212ENST00000515533 HRCP23327 699 aa12.93□□□□□ -0.34
CDC42SE2-212ENST00000515533 BAG6P46379 1132 aa12.93□□□□□ -0.34
CDC42SE2-212ENST00000515533 PLCB2Q00722 1185 aa12.93□□□□□ -0.34
CDC42SE2-212ENST00000515533 GPHNQ9NQX3 736 aaPredicted RBP12.93□□□□□ -0.34
CDC42SE2-212ENST00000515533 LRP5O75197 1615 aa12.92□□□□□ -0.34
CDC42SE2-212ENST00000515533 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
CDC42SE2-212ENST00000515533 NUDT16Q96DE0 195 aaKnown RBP12.92□□□□□ -0.34
CDC42SE2-212ENST00000515533 DSG2Q14126 1118 aa12.91□□□□□ -0.34
CDC42SE2-212ENST00000515533 QRICH2Q9H0J4 1663 aa12.91□□□□□ -0.34
CDC42SE2-212ENST00000515533 SPATA31A5Q5VU36 1347 aa12.9□□□□□ -0.34
CDC42SE2-212ENST00000515533 SPATA31A7Q8IWB4 1347 aa12.9□□□□□ -0.34
CDC42SE2-212ENST00000515533 KIAA0232Q92628 1395 aa12.9□□□□□ -0.34
CDC42SE2-212ENST00000515533 CDK19Q9BWU1 502 aa12.89□□□□□ -0.35
CDC42SE2-212ENST00000515533 NRKQ7Z2Y5 1582 aa12.89□□□□□ -0.35
CDC42SE2-212ENST00000515533 TBC1D12O60347 775 aa12.88□□□□□ -0.35
CDC42SE2-212ENST00000515533 STRN4Q9NRL3 753 aa12.88□□□□□ -0.35
CDC42SE2-212ENST00000515533 ACEP12821 1306 aa12.88□□□□□ -0.35
CDC42SE2-212ENST00000515533 POLR3AO14802 1390 aaPredicted RBP12.87□□□□□ -0.35
CDC42SE2-212ENST00000515533 CHRNA2Q15822 529 aa12.87□□□□□ -0.35
CDC42SE2-212ENST00000515533 FAM182BQ5T319 152 aa12.87□□□□□ -0.35
CDC42SE2-212ENST00000515533 NUTM2GQ5VZR2 741 aa12.87□□□□□ -0.35
CDC42SE2-212ENST00000515533 HS6ST3Q8IZP7 471 aa12.87□□□□□ -0.35
CDC42SE2-212ENST00000515533 ZC3H6P61129 1189 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-212ENST00000515533 KCTD12Q96CX2 325 aaKnown RBP12.86□□□□□ -0.35
CDC42SE2-212ENST00000515533 SPATA31A1Q5TZJ5 1347 aa12.86□□□□□ -0.35
CDC42SE2-212ENST00000515533 EVA1CP58658 441 aa12.85□□□□□ -0.35
CDC42SE2-212ENST00000515533 EN1Q05925 392 aaPredicted RBP12.85□□□□□ -0.35
CDC42SE2-212ENST00000515533 NBPF8Q3BBV2 869 aa12.85□□□□□ -0.35
CDC42SE2-212ENST00000515533 ABTB2Q8N961 1025 aa12.85□□□□□ -0.35
CDC42SE2-212ENST00000515533 USP35Q9P2H5 1018 aa12.85□□□□□ -0.35
CDC42SE2-212ENST00000515533 LMO7Q8WWI1 1683 aa12.85□□□□□ -0.35
CDC42SE2-212ENST00000515533 SRPK2P78362 688 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 DISP2A7MBM2 1401 aa12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 PPIP5K1Q6PFW1 1433 aa12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 SSH2Q76I76 1423 aa12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 PARP4Q9UKK3 1724 aaKnown RBP12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 CENPJQ9HC77 1338 aaPredicted RBP12.84□□□□□ -0.35
CDC42SE2-212ENST00000515533 PLEKHG3A1L390 1219 aa12.83□□□□□ -0.36
CDC42SE2-212ENST00000515533 NBPF1Q3BBV0 1214 aa12.83□□□□□ -0.36
CDC42SE2-212ENST00000515533 RREB1Q92766 1687 aa12.83□□□□□ -0.36
CDC42SE2-212ENST00000515533 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
CDC42SE2-212ENST00000515533 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
CDC42SE2-212ENST00000515533 FAM196AQ6ZSG2 479 aa12.82□□□□□ -0.36
CDC42SE2-212ENST00000515533 SBF2Q86WG5 1849 aa12.82□□□□□ -0.36
CDC42SE2-212ENST00000515533 WNK3Q9BYP7 1800 aa12.82□□□□□ -0.36
CDC42SE2-212ENST00000515533 NUP188Q5SRE5 1749 aa12.82□□□□□ -0.36
CDC42SE2-212ENST00000515533 CPDO75976 1380 aa12.81□□□□□ -0.36
CDC42SE2-212ENST00000515533 TRPM1Q7Z4N2 1603 aa12.81□□□□□ -0.36
CDC42SE2-212ENST00000515533 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
CDC42SE2-212ENST00000515533 NLRP13Q86W25 1043 aa12.81□□□□□ -0.36
CDC42SE2-212ENST00000515533 AKAP12Q02952 1782 aa12.81□□□□□ -0.36
CDC42SE2-212ENST00000515533 TRIM37O94972 964 aa12.8□□□□□ -0.36
CDC42SE2-212ENST00000515533 BARGINQ6ZT62 677 aa12.8□□□□□ -0.36
CDC42SE2-212ENST00000515533 USP19O94966 1318 aa12.8□□□□□ -0.36
CDC42SE2-212ENST00000515533 BRD4O60885 1362 aaPredicted RBP12.8□□□□□ -0.36
CDC42SE2-212ENST00000515533 PARD3Q8TEW0 1356 aa12.8□□□□□ -0.36
CDC42SE2-212ENST00000515533 PIK3C2AO00443 1686 aa12.8□□□□□ -0.36
CDC42SE2-212ENST00000515533 KAT6BQ8WYB5 2073 aa12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 R3HDM1Q15032 1099 aaKnown RBP12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 EZH2Q15910 746 aaKnown RBP12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 LARP1Q6PKG0 1096 aaKnown RBP12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 TCP11L2Q8N4U5 519 aa12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 OXER1Q8TDS5 423 aa12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 VPS9D1Q9Y2B5 631 aa12.79□□□□□ -0.36
CDC42SE2-212ENST00000515533 COL5A2P05997 1499 aaPredicted RBP12.78□□□□□ -0.36
CDC42SE2-212ENST00000515533 APBA3O96018 575 aa12.78□□□□□ -0.36
CDC42SE2-212ENST00000515533 GCP02774 474 aa12.78□□□□□ -0.36
CDC42SE2-212ENST00000515533 USP6P35125 1406 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms