RNA–Protein interactions for RNA: ENST00000515531.1

SMARCA5-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-203ENST00000515531 UCN2Q96RP3 112 aa9.68□□□□□ -0.86
SMARCA5-203ENST00000515531 TFIP11Q9UBB9 837 aaKnown RBP9.68□□□□□ -0.86
SMARCA5-203ENST00000515531 ARID3CA6NKF2 412 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 ATP5J2-PTCD1G3V325 749 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 ATP9BO43861 1147 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 RELBQ01201 579 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 CYP2U1Q7Z449 544 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 AGBL1Q96MI9 1066 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 SENP2Q9HC62 589 aa9.67□□□□□ -0.86
SMARCA5-203ENST00000515531 USP17L5A8MUK1 530 aa9.66□□□□□ -0.86
SMARCA5-203ENST00000515531 TRIM46Q7Z4K8 759 aa9.66□□□□□ -0.86
SMARCA5-203ENST00000515531 ZNF775Q96BV0 537 aaPredicted RBP9.66□□□□□ -0.86
SMARCA5-203ENST00000515531 ZFP42Q96MM3 310 aa9.66□□□□□ -0.86
SMARCA5-203ENST00000515531 PPP1R12CQ9BZL4 782 aa9.66□□□□□ -0.86
SMARCA5-203ENST00000515531 PALM3A6NDB9 673 aaPredicted RBP9.65□□□□□ -0.86
SMARCA5-203ENST00000515531 NCOA4Q13772 614 aa9.65□□□□□ -0.86
SMARCA5-203ENST00000515531 DEPDC4Q8N2C3 294 aa9.65□□□□□ -0.86
SMARCA5-203ENST00000515531 OSBPL3Q9H4L5 887 aa9.65□□□□□ -0.86
SMARCA5-203ENST00000515531 NOD1Q9Y239 953 aa9.65□□□□□ -0.86
SMARCA5-203ENST00000515531 PTGIRP43119 386 aa9.64□□□□□ -0.87
SMARCA5-203ENST00000515531 KIFC2Q96AC6 838 aa9.64□□□□□ -0.87
SMARCA5-203ENST00000515531 CCDC97Q96F63 343 aaPredicted RBP9.64□□□□□ -0.87
SMARCA5-203ENST00000515531 ZNF395Q9H8N7 513 aaPredicted RBP9.64□□□□□ -0.87
SMARCA5-203ENST00000515531 GMPR2Q9P2T1 348 aaKnown RBP9.64□□□□□ -0.87
SMARCA5-203ENST00000515531 USP17L3A6NCW0 530 aa9.63□□□□□ -0.87
SMARCA5-203ENST00000515531 USP17L4A6NCW7 530 aa9.63□□□□□ -0.87
SMARCA5-203ENST00000515531 USP17L2Q6R6M4 530 aa9.63□□□□□ -0.87
SMARCA5-203ENST00000515531 USP17L1Q7RTZ2 530 aa9.63□□□□□ -0.87
SMARCA5-203ENST00000515531 PLEKHM2Q8IWE5 1019 aa9.63□□□□□ -0.87
SMARCA5-203ENST00000515531 C11orf95C9JLR9 678 aaPredicted RBP9.62□□□□□ -0.87
SMARCA5-203ENST00000515531 GNRH1P01148 92 aa9.62□□□□□ -0.87
SMARCA5-203ENST00000515531 LMOD1P29536 600 aaPredicted RBP9.62□□□□□ -0.87
SMARCA5-203ENST00000515531 SERPINA10Q9UK55 444 aa9.62□□□□□ -0.87
SMARCA5-203ENST00000515531 SPINT1O43278 529 aa9.61□□□□□ -0.87
SMARCA5-203ENST00000515531 TRIM50Q86XT4 487 aa9.61□□□□□ -0.87
SMARCA5-203ENST00000515531 NLRP3Q96P20 1036 aa9.61□□□□□ -0.87
SMARCA5-203ENST00000515531 MAFBQ9Y5Q3 323 aaPredicted RBP9.61□□□□□ -0.87
SMARCA5-203ENST00000515531 A0A1W2PRU2 124 aa9.6□□□□□ -0.87
SMARCA5-203ENST00000515531 MEN1O00255 615 aa9.6□□□□□ -0.87
SMARCA5-203ENST00000515531 KDF1Q8NAX2 398 aaPredicted RBP9.6□□□□□ -0.87
SMARCA5-203ENST00000515531 POLMQ9NP87 494 aaPredicted RBP9.6□□□□□ -0.87
SMARCA5-203ENST00000515531 MKRN1Q9UHC7 482 aaKnown RBP9.6□□□□□ -0.87
SMARCA5-203ENST00000515531 SUPT5HO00267 1087 aaKnown RBP9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 RFX1P22670 979 aa9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 ATP1A2P50993 1020 aa9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 PSME1Q06323 249 aa9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 ESCO1Q5FWF5 840 aa9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 TRIM47Q96LD4 638 aa9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 INSM2Q96T92 566 aaPredicted RBP9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 ARHGEF10LQ9HCE6 1279 aa9.59□□□□□ -0.87
SMARCA5-203ENST00000515531 TTLL8A6PVC2 850 aa9.58□□□□□ -0.88
SMARCA5-203ENST00000515531 GTF2IP78347 998 aa9.58□□□□□ -0.88
SMARCA5-203ENST00000515531 RAB6BQ9NRW1 208 aa9.58□□□□□ -0.88
SMARCA5-203ENST00000515531 POTECB2RU33 542 aa9.57□□□□□ -0.88
SMARCA5-203ENST00000515531 MAN1A2O60476 641 aa9.57□□□□□ -0.88
SMARCA5-203ENST00000515531 CFAP70Q5T0N1 1121 aa9.57□□□□□ -0.88
SMARCA5-203ENST00000515531 VRTNQ9H8Y1 702 aa9.57□□□□□ -0.88
SMARCA5-203ENST00000515531 SOS2Q07890 1332 aaPredicted RBP9.56□□□□□ -0.88
SMARCA5-203ENST00000515531 CTSOP43234 321 aaPredicted RBP9.56□□□□□ -0.88
SMARCA5-203ENST00000515531 CLN3Q13286 438 aa9.56□□□□□ -0.88
SMARCA5-203ENST00000515531 CNKSR1Q969H4 720 aa9.56□□□□□ -0.88
SMARCA5-203ENST00000515531 PCDHGA11Q9Y5H2 935 aa9.56□□□□□ -0.88
SMARCA5-203ENST00000515531 SNRPBP14678 240 aaKnown RBP9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 RASA1P20936 1047 aa9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 GDF10P55107 478 aa9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 LARP1Q6PKG0 1096 aaKnown RBP9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 CCDC82Q8N4S0 544 aa9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 OGFOD1Q8N543 542 aa9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 DNAAF2Q9NVR5 837 aaKnown RBP9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
SMARCA5-203ENST00000515531 FIGNL2A6NMB9 653 aa9.54□□□□□ -0.88
SMARCA5-203ENST00000515531 SLC27A3Q5K4L6 730 aa9.54□□□□□ -0.88
SMARCA5-203ENST00000515531 ESYT1Q9BSJ8 1104 aa9.54□□□□□ -0.88
SMARCA5-203ENST00000515531 C1orf115Q9H7X2 142 aa9.54□□□□□ -0.88
SMARCA5-203ENST00000515531 ETNK1Q9HBU6 452 aa9.54□□□□□ -0.88
SMARCA5-203ENST00000515531 STAU1O95793 577 aaKnown RBP9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 INHAP05111 366 aa9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 GTF2E1P29083 439 aaPredicted RBP9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 GPC1P35052 558 aa9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 RNF144AP50876 292 aaPredicted RBP9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 KANK4Q5T7N3 995 aaPredicted RBP9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 LARGE2Q8N3Y3 721 aa9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 XAGE2Q96GT9 111 aa9.53□□□□□ -0.88
SMARCA5-203ENST00000515531 IL2RAP01589 272 aa9.52□□□□□ -0.89
SMARCA5-203ENST00000515531 CLDN10P78369 228 aa9.52□□□□□ -0.89
SMARCA5-203ENST00000515531 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.52□□□□□ -0.89
SMARCA5-203ENST00000515531 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
SMARCA5-203ENST00000515531 BACH1O14867 736 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 SCNN1DP51172 638 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 CENPCQ03188 943 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 CDCA8Q53HL2 280 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 CCDC102BQ68D86 513 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 LYSMD3Q7Z3D4 306 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 ZNF594Q96JF6 807 aaPredicted RBP9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 SERTAD1Q9UHV2 236 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 DNMT3LQ9UJW3 386 aa9.51□□□□□ -0.89
SMARCA5-203ENST00000515531 SOBPA7XYQ1 873 aa9.5□□□□□ -0.89
SMARCA5-203ENST00000515531 ZBTB7BO15156 539 aaPredicted RBP9.5□□□□□ -0.89
SMARCA5-203ENST00000515531 FOXD4L5Q5VV16 416 aaPredicted RBP9.5□□□□□ -0.89
SMARCA5-203ENST00000515531 PRICKLE2Q7Z3G6 844 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms