RNA–Protein interactions for RNA: ENST00000515527.1

SMAD1-216, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 632 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-216ENST00000515527 SYTL4Q96C24 671 aaPredicted RBP19.85■□□□□ 0.77
SMAD1-216ENST00000515527 BCS1LQ9Y276 419 aa19.85■□□□□ 0.77
SMAD1-216ENST00000515527 SLIT3O75094 1523 aa19.85■□□□□ 0.77
SMAD1-216ENST00000515527 C9orf131Q5VYM1 1079 aa19.84■□□□□ 0.77
SMAD1-216ENST00000515527 CDK19Q9BWU1 502 aa19.84■□□□□ 0.77
SMAD1-216ENST00000515527 CTCFP49711 727 aaPredicted RBP19.83■□□□□ 0.77
SMAD1-216ENST00000515527 TNRC6CQ9HCJ0 1690 aaKnown RBP19.83■□□□□ 0.76
SMAD1-216ENST00000515527 ADGRB1O14514 1584 aa19.83■□□□□ 0.76
SMAD1-216ENST00000515527 CCDC85CA6NKD9 419 aa19.82■□□□□ 0.76
SMAD1-216ENST00000515527 AIDAQ96BJ3 306 aa19.82■□□□□ 0.76
SMAD1-216ENST00000515527 IL2RBP14784 551 aa19.81■□□□□ 0.76
SMAD1-216ENST00000515527 RGS19P49795 217 aa19.81■□□□□ 0.76
SMAD1-216ENST00000515527 FLAD1Q8NFF5 587 aa19.81■□□□□ 0.76
SMAD1-216ENST00000515527 PKD1L3Q7Z443 1732 aa19.81■□□□□ 0.76
SMAD1-216ENST00000515527 MKRN1Q9UHC7 482 aaKnown RBP19.8■□□□□ 0.76
SMAD1-216ENST00000515527 SOX12O15370 315 aa19.79■□□□□ 0.76
SMAD1-216ENST00000515527 ARHGEF25Q86VW2 580 aa19.79■□□□□ 0.76
SMAD1-216ENST00000515527 PXDNLA1KZ92 1463 aa19.78■□□□□ 0.76
SMAD1-216ENST00000515527 PRIM1P49642 420 aaKnown RBP19.77■□□□□ 0.76
SMAD1-216ENST00000515527 DDX54Q8TDD1 881 aaKnown RBP19.77■□□□□ 0.76
SMAD1-216ENST00000515527 NLRP2Q9NX02 1062 aa19.77■□□□□ 0.76
SMAD1-216ENST00000515527 N4BP2Q86UW6 1770 aaPredicted RBP19.76■□□□□ 0.75
SMAD1-216ENST00000515527 LBX1P52954 281 aa19.76■□□□□ 0.75
SMAD1-216ENST00000515527 PDE4DIPQ5VU43 2346 aa19.75■□□□□ 0.75
SMAD1-216ENST00000515527 C5P01031 1676 aa19.73■□□□□ 0.75
SMAD1-216ENST00000515527 USP54Q70EL1 1684 aa19.73■□□□□ 0.75
SMAD1-216ENST00000515527 FCHSD2O94868 740 aa19.73■□□□□ 0.75
SMAD1-216ENST00000515527 RNF181Q9P0P0 153 aa19.73■□□□□ 0.75
SMAD1-216ENST00000515527 KCNH5Q8NCM2 988 aa19.72■□□□□ 0.75
SMAD1-216ENST00000515527 DOT1LQ8TEK3 1739 aa19.72■□□□□ 0.75
SMAD1-216ENST00000515527 TNRC18O15417 2968 aaPredicted RBP19.71■□□□□ 0.75
SMAD1-216ENST00000515527 ANKRD36BQ8N2N9 1353 aa19.71■□□□□ 0.75
SMAD1-216ENST00000515527 A0A0G2JLW4 131 aa19.71■□□□□ 0.75
SMAD1-216ENST00000515527 CFAP44Q96MT7 982 aa19.7■□□□□ 0.74
SMAD1-216ENST00000515527 USP47Q96K76 1375 aa19.7■□□□□ 0.74
SMAD1-216ENST00000515527 PHF14O94880 888 aa19.69■□□□□ 0.74
SMAD1-216ENST00000515527 SMIM5Q71RC9 77 aa19.69■□□□□ 0.74
SMAD1-216ENST00000515527 CREBZFQ9NS37 354 aa19.69■□□□□ 0.74
SMAD1-216ENST00000515527 NSD2O96028 1365 aa19.69■□□□□ 0.74
SMAD1-216ENST00000515527 KIAA1551Q9HCM1 1747 aa19.68■□□□□ 0.74
SMAD1-216ENST00000515527 TGFB2P61812 414 aa19.68■□□□□ 0.74
SMAD1-216ENST00000515527 ERBB3P21860 1342 aa19.68■□□□□ 0.74
SMAD1-216ENST00000515527 QRICH2Q9H0J4 1663 aa19.68■□□□□ 0.74
SMAD1-216ENST00000515527 VEGFAP15692 232 aaPredicted RBP19.67■□□□□ 0.74
SMAD1-216ENST00000515527 AK7Q96M32 723 aa19.66■□□□□ 0.74
SMAD1-216ENST00000515527 KIF13BQ9NQT8 1826 aa19.66■□□□□ 0.74
SMAD1-216ENST00000515527 TAF1LQ8IZX4 1826 aa19.65■□□□□ 0.74
SMAD1-216ENST00000515527 HMGB2P26583 209 aaKnown RBP19.65■□□□□ 0.74
SMAD1-216ENST00000515527 SRPK2P78362 688 aaKnown RBP19.64■□□□□ 0.73
SMAD1-216ENST00000515527 ARFGEF1Q9Y6D6 1849 aa19.63■□□□□ 0.73
SMAD1-216ENST00000515527 CNTNAP1P78357 1384 aa19.63■□□□□ 0.73
SMAD1-216ENST00000515527 HSPA8P11142 646 aaKnown RBP19.62■□□□□ 0.73
SMAD1-216ENST00000515527 DPEP1P16444 411 aa19.62■□□□□ 0.73
SMAD1-216ENST00000515527 AMIGO3Q86WK7 504 aa19.62■□□□□ 0.73
SMAD1-216ENST00000515527 WBP1LQ9NX94 342 aa19.62■□□□□ 0.73
SMAD1-216ENST00000515527 SBF1O95248 1867 aa19.61■□□□□ 0.73
SMAD1-216ENST00000515527 BRCA1P38398 1863 aaKnown RBP19.61■□□□□ 0.73
SMAD1-216ENST00000515527 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.61■□□□□ 0.73
SMAD1-216ENST00000515527 MMP10P09238 476 aa19.61■□□□□ 0.73
SMAD1-216ENST00000515527 C4BP0C0L5 1744 aa19.6■□□□□ 0.73
SMAD1-216ENST00000515527 TOGARAM1Q9Y4F4 1720 aa19.6■□□□□ 0.73
SMAD1-216ENST00000515527 UBR3Q6ZT12 1888 aa19.6■□□□□ 0.73
SMAD1-216ENST00000515527 NSD3Q9BZ95 1437 aa19.59■□□□□ 0.73
SMAD1-216ENST00000515527 NFAT5O94916 1531 aa19.59■□□□□ 0.73
SMAD1-216ENST00000515527 CABP1Q9NZU7 370 aa19.58■□□□□ 0.72
SMAD1-216ENST00000515527 KDM2AQ9Y2K7 1162 aa19.58■□□□□ 0.72
SMAD1-216ENST00000515527 VEGFBP49765 207 aa19.57■□□□□ 0.72
SMAD1-216ENST00000515527 ANKRD24Q8TF21 1146 aa19.57■□□□□ 0.72
SMAD1-216ENST00000515527 GLTPD2A6NH11 291 aa19.56■□□□□ 0.72
SMAD1-216ENST00000515527 MPHOSPH9Q99550 1183 aa19.56■□□□□ 0.72
SMAD1-216ENST00000515527 CABP2Q9NPB3 220 aa19.56■□□□□ 0.72
SMAD1-216ENST00000515527 VIRMAQ69YN4 1812 aaKnown RBP19.55■□□□□ 0.72
SMAD1-216ENST00000515527 ZC3H4Q9UPT8 1303 aaKnown RBP19.54■□□□□ 0.72
SMAD1-216ENST00000515527 SSFA2P28290 1259 aa19.54■□□□□ 0.72
SMAD1-216ENST00000515527 DCAF5Q96JK2 942 aa19.54■□□□□ 0.72
SMAD1-216ENST00000515527 PIM2Q9P1W9 311 aa19.53■□□□□ 0.72
SMAD1-216ENST00000515527 PALLDQ8WX93 1383 aa19.53■□□□□ 0.72
SMAD1-216ENST00000515527 DALRD3Q5D0E6 543 aaKnown RBP19.52■□□□□ 0.72
SMAD1-216ENST00000515527 CCDC87Q9NVE4 849 aa19.52■□□□□ 0.72
SMAD1-216ENST00000515527 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
SMAD1-216ENST00000515527 KCNA3P22001 575 aa19.5■□□□□ 0.71
SMAD1-216ENST00000515527 CHADLQ6NUI6 762 aa19.5■□□□□ 0.71
SMAD1-216ENST00000515527 LTN1O94822 1766 aa19.49■□□□□ 0.71
SMAD1-216ENST00000515527 ZCRB1Q8TBF4 217 aaKnown RBP19.49■□□□□ 0.71
SMAD1-216ENST00000515527 MAP2K1Q02750 393 aaPredicted RBP19.48■□□□□ 0.71
SMAD1-216ENST00000515527 PRPF38BQ5VTL8 546 aaKnown RBP19.48■□□□□ 0.71
SMAD1-216ENST00000515527 RASSF7Q02833 373 aa19.47■□□□□ 0.71
SMAD1-216ENST00000515527 DCAF11Q8TEB1 546 aa19.47■□□□□ 0.71
SMAD1-216ENST00000515527 TTC21AQ8NDW8 1320 aa19.46■□□□□ 0.71
SMAD1-216ENST00000515527 POTECB2RU33 542 aa19.45■□□□□ 0.7
SMAD1-216ENST00000515527 GNPATO15228 680 aa19.44■□□□□ 0.7
SMAD1-216ENST00000515527 LMNB1P20700 586 aa19.44■□□□□ 0.7
SMAD1-216ENST00000515527 TIAM2Q8IVF5 1701 aa19.43■□□□□ 0.7
SMAD1-216ENST00000515527 TMEM88BA6NKF7 163 aa19.43■□□□□ 0.7
SMAD1-216ENST00000515527 MPRIPQ6WCQ1 1025 aa19.43■□□□□ 0.7
SMAD1-216ENST00000515527 NLGN1Q8N2Q7 840 aa19.43■□□□□ 0.7
SMAD1-216ENST00000515527 LTV1Q96GA3 475 aaPredicted RBP19.43■□□□□ 0.7
SMAD1-216ENST00000515527 C4AP0C0L4 1744 aa19.42■□□□□ 0.7
SMAD1-216ENST00000515527 TMF1P82094 1093 aa19.42■□□□□ 0.7
SMAD1-216ENST00000515527 ZNF692Q9BU19 519 aaPredicted RBP19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms