RNA–Protein interactions for RNA: ENST00000515508.6

SPOP-220, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-220ENST00000515508 NSD2O96028 1365 aa25.83■■□□□ 1.73
SPOP-220ENST00000515508 MAP3K5Q99683 1374 aa25.83■■□□□ 1.73
SPOP-220ENST00000515508 AKT1S1Q96B36 256 aa25.82■■□□□ 1.72
SPOP-220ENST00000515508 TMF1P82094 1093 aa25.81■■□□□ 1.72
SPOP-220ENST00000515508 FYB1O15117 783 aa25.8■■□□□ 1.72
SPOP-220ENST00000515508 ZCRB1Q8TBF4 217 aaKnown RBP25.79■■□□□ 1.72
SPOP-220ENST00000515508 ARXQ96QS3 562 aa25.79■■□□□ 1.72
SPOP-220ENST00000515508 RRS1Q15050 365 aaKnown RBP25.78■■□□□ 1.72
SPOP-220ENST00000515508 SMG6Q86US8 1419 aaKnown RBP25.78■■□□□ 1.72
SPOP-220ENST00000515508 CHD4Q14839 1912 aa25.77■■□□□ 1.72
SPOP-220ENST00000515508 PRIM1P49642 420 aaKnown RBP25.77■■□□□ 1.72
SPOP-220ENST00000515508 NBPF6Q5VWK0 638 aa25.77■■□□□ 1.72
SPOP-220ENST00000515508 SLC16A10Q8TF71 515 aa25.77■■□□□ 1.72
SPOP-220ENST00000515508 SYTL4Q96C24 671 aaPredicted RBP25.77■■□□□ 1.72
SPOP-220ENST00000515508 NBPF4Q96M43 638 aa25.77■■□□□ 1.72
SPOP-220ENST00000515508 GGNBP2Q9H3C7 697 aa25.77■■□□□ 1.72
SPOP-220ENST00000515508 CGNL1Q0VF96 1302 aa25.77■■□□□ 1.72
SPOP-220ENST00000515508 PNPLA7Q6ZV29 1317 aa25.76■■□□□ 1.71
SPOP-220ENST00000515508 KIF24Q5T7B8 1368 aa25.75■■□□□ 1.71
SPOP-220ENST00000515508 INSRP06213 1382 aa25.74■■□□□ 1.71
SPOP-220ENST00000515508 FLT4P35916 1363 aa25.73■■□□□ 1.71
SPOP-220ENST00000515508 ANKRD26Q9UPS8 1709 aa25.72■■□□□ 1.71
SPOP-220ENST00000515508 CDCA8Q53HL2 280 aa25.72■■□□□ 1.71
SPOP-220ENST00000515508 KCNQ4P56696 695 aa25.71■■□□□ 1.71
SPOP-220ENST00000515508 USHBP1Q8N6Y0 703 aa25.71■■□□□ 1.71
SPOP-220ENST00000515508 TRIM26Q12899 539 aaPredicted RBP25.7■■□□□ 1.7
SPOP-220ENST00000515508 RAPGEF4Q8WZA2 1011 aa25.7■■□□□ 1.7
SPOP-220ENST00000515508 TFCP2L1Q9NZI6 479 aa25.7■■□□□ 1.7
SPOP-220ENST00000515508 C5P01031 1676 aa25.7■■□□□ 1.7
SPOP-220ENST00000515508 PKD1L3Q7Z443 1732 aa25.69■■□□□ 1.7
SPOP-220ENST00000515508 HSP90AB2PQ58FF8 381 aa25.68■■□□□ 1.7
SPOP-220ENST00000515508 GOLGB1Q14789 3259 aaKnown RBP25.68■■□□□ 1.7
SPOP-220ENST00000515508 PCDH11XQ9BZA7 1347 aa25.67■■□□□ 1.7
SPOP-220ENST00000515508 PCDH11YQ9BZA8 1340 aa25.67■■□□□ 1.7
SPOP-220ENST00000515508 POLD1P28340 1107 aa25.67■■□□□ 1.7
SPOP-220ENST00000515508 ZNF784Q8NCA9 323 aaPredicted RBP25.67■■□□□ 1.7
SPOP-220ENST00000515508 CCNL1Q9UK58 526 aaPredicted RBP25.67■■□□□ 1.7
SPOP-220ENST00000515508 TOGARAM1Q9Y4F4 1720 aa25.67■■□□□ 1.7
SPOP-220ENST00000515508 NCAPD2Q15021 1401 aa25.66■■□□□ 1.7
SPOP-220ENST00000515508 TAF1LQ8IZX4 1826 aa25.66■■□□□ 1.7
SPOP-220ENST00000515508 TATP17735 454 aaPredicted RBP25.66■■□□□ 1.7
SPOP-220ENST00000515508 NSD3Q9BZ95 1437 aa25.65■■□□□ 1.7
SPOP-220ENST00000515508 CARD14Q9BXL6 1004 aa25.64■■□□□ 1.7
SPOP-220ENST00000515508 ITGB4P16144 1822 aa25.64■■□□□ 1.7
SPOP-220ENST00000515508 EMILIN1Q9Y6C2 1016 aa25.61■■□□□ 1.69
SPOP-220ENST00000515508 PALLDQ8WX93 1383 aa25.59■■□□□ 1.69
SPOP-220ENST00000515508 CYP27B1O15528 508 aa25.59■■□□□ 1.69
SPOP-220ENST00000515508 TIMELESSQ9UNS1 1208 aa25.59■■□□□ 1.69
SPOP-220ENST00000515508 MAP2P11137 1827 aaKnown RBP25.58■■□□□ 1.69
SPOP-220ENST00000515508 COL23A1Q86Y22 540 aaPredicted RBP25.58■■□□□ 1.69
SPOP-220ENST00000515508 KLHL34Q8N239 644 aa25.58■■□□□ 1.69
SPOP-220ENST00000515508 C4BP0C0L5 1744 aa25.57■■□□□ 1.68
SPOP-220ENST00000515508 GPR162Q16538 588 aa25.57■■□□□ 1.68
SPOP-220ENST00000515508 HMGB2P26583 209 aaKnown RBP25.56■■□□□ 1.68
SPOP-220ENST00000515508 NLGN2Q8NFZ4 835 aa25.55■■□□□ 1.68
SPOP-220ENST00000515508 MPRIPQ6WCQ1 1025 aa25.54■■□□□ 1.68
SPOP-220ENST00000515508 WASHC2AQ641Q2 1341 aa25.54■■□□□ 1.68
SPOP-220ENST00000515508 UBR3Q6ZT12 1888 aa25.53■■□□□ 1.68
SPOP-220ENST00000515508 MSH5O43196 834 aa25.52■■□□□ 1.68
SPOP-220ENST00000515508 NKX1-1Q15270 411 aaPredicted RBP25.52■■□□□ 1.68
SPOP-220ENST00000515508 CLSPNQ9HAW4 1339 aa25.52■■□□□ 1.68
SPOP-220ENST00000515508 FLAD1Q8NFF5 587 aa25.5■■□□□ 1.67
SPOP-220ENST00000515508 SMARCC1Q92922 1105 aaPredicted RBP25.5■■□□□ 1.67
SPOP-220ENST00000515508 PPM1GO15355 546 aaPredicted RBP25.49■■□□□ 1.67
SPOP-220ENST00000515508 PLEKHG2Q9H7P9 1386 aa25.48■■□□□ 1.67
SPOP-220ENST00000515508 MSL1Q68DK7 614 aa25.48■■□□□ 1.67
SPOP-220ENST00000515508 EYA1Q99502 592 aa25.48■■□□□ 1.67
SPOP-220ENST00000515508 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.48■■□□□ 1.676e-9■□□□□ 11.1
SPOP-220ENST00000515508 SPG7Q9UQ90 795 aa25.48■■□□□ 1.67
SPOP-220ENST00000515508 PELP1Q8IZL8 1130 aaKnown RBP25.47■■□□□ 1.67
SPOP-220ENST00000515508 PIGBQ92521 554 aa25.47■■□□□ 1.67
SPOP-220ENST00000515508 POLKQ9UBT6 870 aa25.47■■□□□ 1.67
SPOP-220ENST00000515508 YBX3P16989 372 aaKnown RBP eCLIP25.45■■□□□ 1.662e-10■■□□□ 12.8
SPOP-220ENST00000515508 AMIGO3Q86WK7 504 aa25.44■■□□□ 1.66
SPOP-220ENST00000515508 AK7Q96M32 723 aa25.43■■□□□ 1.66
SPOP-220ENST00000515508 CD2APQ9Y5K6 639 aa25.43■■□□□ 1.66
SPOP-220ENST00000515508 GRIN3BO60391 1043 aa25.42■■□□□ 1.66
SPOP-220ENST00000515508 C1QTNF8P60827 252 aa25.42■■□□□ 1.66
SPOP-220ENST00000515508 PHKG2P15735 406 aa25.41■■□□□ 1.66
SPOP-220ENST00000515508 LOC102724428A0A0B4J2F2 783 aa25.4■■□□□ 1.66
SPOP-220ENST00000515508 SIK1P57059 783 aa25.4■■□□□ 1.66
SPOP-220ENST00000515508 EIF4A2Q14240 407 aaKnown RBP25.4■■□□□ 1.66
SPOP-220ENST00000515508 IFNL2Q8IZJ0 200 aa25.4■■□□□ 1.66
SPOP-220ENST00000515508 TMOD3Q9NYL9 352 aa25.4■■□□□ 1.66
SPOP-220ENST00000515508 ZNF831Q5JPB2 1677 aa25.39■■□□□ 1.66
SPOP-220ENST00000515508 SSFA2P28290 1259 aa25.39■■□□□ 1.66
SPOP-220ENST00000515508 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.38■■□□□ 1.65
SPOP-220ENST00000515508 LINC00116Q8NCU8 138 aa25.38■■□□□ 1.65
SPOP-220ENST00000515508 IGSF1Q8N6C5 1336 aa25.37■■□□□ 1.65
SPOP-220ENST00000515508 KDRP35968 1356 aa25.36■■□□□ 1.65
SPOP-220ENST00000515508 PHF14O94880 888 aa25.36■■□□□ 1.65
SPOP-220ENST00000515508 ASAP1Q9ULH1 1129 aa25.36■■□□□ 1.65
SPOP-220ENST00000515508 ITPK1Q13572 414 aa25.35■■□□□ 1.65
SPOP-220ENST00000515508 POLR3GLQ9BT43 218 aa25.35■■□□□ 1.65
SPOP-220ENST00000515508 GIGYF1O75420 1035 aaPredicted RBP25.34■■□□□ 1.65
SPOP-220ENST00000515508 TNNT2P45379 298 aaPredicted RBP25.34■■□□□ 1.65
SPOP-220ENST00000515508 SMIM5Q71RC9 77 aa25.34■■□□□ 1.65
SPOP-220ENST00000515508 COL5A3P25940 1745 aaPredicted RBP25.34■■□□□ 1.65
SPOP-220ENST00000515508 SENP3-EIF4A1A0A087X0R7 540 aa25.33■■□□□ 1.65
SPOP-220ENST00000515508 EIF4G2P78344 907 aaKnown RBP eCLIP25.33■■□□□ 1.652e-6■■■■■ 26.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms