RNA–Protein interactions for RNA: ENST00000515365.1

HERC6-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 3

Gene HERC6, Length 638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-208ENST00000515365 CUX2O14529 1486 aa6.91□□□□□ -1.3
HERC6-208ENST00000515365 SOWAHDA6NJG2 315 aa6.9□□□□□ -1.3
HERC6-208ENST00000515365 SFI1A8K8P3 1242 aa6.9□□□□□ -1.3
HERC6-208ENST00000515365 RNF223E7ERA6 249 aa6.9□□□□□ -1.3
HERC6-208ENST00000515365 ITGBL1O95965 494 aaPredicted RBP6.9□□□□□ -1.3
HERC6-208ENST00000515365 PSME1Q06323 249 aa6.9□□□□□ -1.3
HERC6-208ENST00000515365 TAS1R3Q7RTX0 852 aa6.9□□□□□ -1.3
HERC6-208ENST00000515365 KCTD15Q96SI1 283 aaPredicted RBP6.9□□□□□ -1.3
HERC6-208ENST00000515365 CXXC1Q9P0U4 656 aaPredicted RBP6.9□□□□□ -1.3
HERC6-208ENST00000515365 MAP4K5Q9Y4K4 846 aa6.9□□□□□ -1.3
HERC6-208ENST00000515365 ZBTB24O43167 697 aaPredicted RBP6.89□□□□□ -1.31
HERC6-208ENST00000515365 PRMT3O60678 531 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 VARSP26640 1264 aaKnown RBP6.89□□□□□ -1.31
HERC6-208ENST00000515365 SCNN1AP37088 669 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 SERPINB4P48594 390 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 RBM25P49756 843 aaKnown RBP6.89□□□□□ -1.31
HERC6-208ENST00000515365 WNT7BP56706 349 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 SKOR1P84550 965 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 KCNC4Q03721 635 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 PLA2G2CQ5R387 149 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 ANKLE1Q8NAG6 615 aa6.89□□□□□ -1.31
HERC6-208ENST00000515365 M0R2N6 131 aa6.88□□□□□ -1.31
HERC6-208ENST00000515365 INTS6LQ5JSJ4 861 aaKnown RBP6.88□□□□□ -1.31
HERC6-208ENST00000515365 PRIMPOLQ96LW4 560 aa6.88□□□□□ -1.31
HERC6-208ENST00000515365 ERVH48-1M5A8F1 160 aa6.87□□□□□ -1.31
HERC6-208ENST00000515365 MYCP01106 439 aaPredicted RBP6.87□□□□□ -1.31
HERC6-208ENST00000515365 RAB15P59190 212 aa6.87□□□□□ -1.31
HERC6-208ENST00000515365 GGCXP38435 758 aa6.86□□□□□ -1.31
HERC6-208ENST00000515365 SCTRP47872 440 aa6.86□□□□□ -1.31
HERC6-208ENST00000515365 RPIAP49247 311 aa6.86□□□□□ -1.31
HERC6-208ENST00000515365 ERVK-9P63128 1117 aa6.86□□□□□ -1.31
HERC6-208ENST00000515365 POTEGQ6S5H5 508 aa6.86□□□□□ -1.31
HERC6-208ENST00000515365 DNAJC14Q6Y2X3 702 aaPredicted RBP6.86□□□□□ -1.31
HERC6-208ENST00000515365 VASH1Q7L8A9 365 aaPredicted RBP6.86□□□□□ -1.31
HERC6-208ENST00000515365 EGFL7Q9UHF1 273 aa6.86□□□□□ -1.31
HERC6-208ENST00000515365 WEE1P30291 646 aa6.85□□□□□ -1.31
HERC6-208ENST00000515365 TSEN2Q8NCE0 465 aaKnown RBP6.85□□□□□ -1.31
HERC6-208ENST00000515365 CDK15Q96Q40 435 aa6.85□□□□□ -1.31
HERC6-208ENST00000515365 HINFPQ9BQA5 517 aa6.85□□□□□ -1.31
HERC6-208ENST00000515365 HCSTQ9UBK5 93 aa6.85□□□□□ -1.31
HERC6-208ENST00000515365 LGR5O75473 907 aa6.84□□□□□ -1.31
HERC6-208ENST00000515365 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.84□□□□□ -1.31
HERC6-208ENST00000515365 EHBP1Q8NDI1 1231 aa6.84□□□□□ -1.31
HERC6-208ENST00000515365 ZNF358Q9NW07 568 aa6.84□□□□□ -1.31
HERC6-208ENST00000515365 CECR2Q9BXF3 1484 aa6.84□□□□□ -1.31
HERC6-208ENST00000515365 TMEM229AB2RXF0 380 aa6.83□□□□□ -1.32
HERC6-208ENST00000515365 ERCC3P19447 782 aa6.83□□□□□ -1.32
HERC6-208ENST00000515365 NOM1Q5C9Z4 860 aaKnown RBP6.83□□□□□ -1.32
HERC6-208ENST00000515365 CC2D2BQ6DHV5 1058 aa6.83□□□□□ -1.32
HERC6-208ENST00000515365 PPP1R18Q6NYC8 613 aa6.83□□□□□ -1.32
HERC6-208ENST00000515365 MPNDQ8N594 471 aa6.83□□□□□ -1.32
HERC6-208ENST00000515365 NISCHQ9Y2I1 1504 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 E9PSI1 815 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 WASLO00401 505 aaPredicted RBP6.82□□□□□ -1.32
HERC6-208ENST00000515365 ICMTO60725 284 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 FSHRP23945 695 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 GRM5P41594 1212 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 SCNN1DP51172 638 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 FKBP5Q13451 457 aaPredicted RBP6.82□□□□□ -1.32
HERC6-208ENST00000515365 ARID5BQ14865 1188 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 RC3H1Q5TC82 1133 aaKnown RBP6.82□□□□□ -1.32
HERC6-208ENST00000515365 OSBPL3Q9H4L5 887 aa6.82□□□□□ -1.32
HERC6-208ENST00000515365 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.82□□□□□ -1.32
HERC6-208ENST00000515365 BIN2Q9UBW5 565 aaPredicted RBP6.82□□□□□ -1.32
HERC6-208ENST00000515365 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 H3BRB1 525 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 CD2BP2O95400 341 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 ABL1P00519 1130 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 MARSP56192 900 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 DHX9Q08211 1270 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 ZNF211Q13398 564 aaPredicted RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 TRIM52Q96A61 297 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 COL26A1Q96A83 441 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 PURBQ96QR8 312 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 ESF1Q9H501 851 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 TUT1Q9H6E5 874 aaKnown RBP6.81□□□□□ -1.32
HERC6-208ENST00000515365 CYLDQ9NQC7 956 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 TMPRSS4Q9NRS4 437 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 SEPT3Q9UH03 358 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 TLL2Q9Y6L7 1015 aa6.81□□□□□ -1.32
HERC6-208ENST00000515365 SIAH2O43255 324 aa6.8□□□□□ -1.32
HERC6-208ENST00000515365 PTCD1O75127 700 aaKnown RBP6.8□□□□□ -1.32
HERC6-208ENST00000515365 IGFBP4P22692 258 aa6.8□□□□□ -1.32
HERC6-208ENST00000515365 GDF10P55107 478 aa6.8□□□□□ -1.32
HERC6-208ENST00000515365 CAPN12Q6ZSI9 719 aa6.8□□□□□ -1.32
HERC6-208ENST00000515365 ZNF784Q8NCA9 323 aaPredicted RBP6.8□□□□□ -1.32
HERC6-208ENST00000515365 GTF3C2Q8WUA4 911 aaPredicted RBP6.8□□□□□ -1.32
HERC6-208ENST00000515365 MKNK1Q9BUB5 465 aa6.8□□□□□ -1.32
HERC6-208ENST00000515365 BACH1O14867 736 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 FOXO3O43524 673 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 C21orf2O43822 256 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 LILRA1O75019 489 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 STAU1O95793 577 aaKnown RBP6.79□□□□□ -1.32
HERC6-208ENST00000515365 ADH1CP00326 375 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 EPHA4P54764 986 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 ECM1Q16610 540 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 LIAT1Q6ZQX7 453 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 GLYCTKQ8IVS8 523 aa6.79□□□□□ -1.32
HERC6-208ENST00000515365 RNF166Q96A37 237 aaPredicted RBP6.79□□□□□ -1.32
HERC6-208ENST00000515365 EMID1Q96A84 441 aaPredicted RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms