RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 NBPF4Q96M43 638 aa21.06■□□□□ 0.96
DDR1-278ENST00000515233 CGNL1Q0VF96 1302 aa21.05■□□□□ 0.96
DDR1-278ENST00000515233 SHANK3Q9BYB0 1731 aa21.05■□□□□ 0.96
DDR1-278ENST00000515233 SYTL4Q96C24 671 aaPredicted RBP21.05■□□□□ 0.96
DDR1-278ENST00000515233 GGNBP2Q9H3C7 697 aa21.05■□□□□ 0.96
DDR1-278ENST00000515233 MEGF6O75095 1541 aa21.04■□□□□ 0.96
DDR1-278ENST00000515233 RRS1Q15050 365 aaKnown RBP21.04■□□□□ 0.96
DDR1-278ENST00000515233 NSD2O96028 1365 aa21.04■□□□□ 0.96
DDR1-278ENST00000515233 DOT1LQ8TEK3 1739 aa21.04■□□□□ 0.96
DDR1-278ENST00000515233 PNPLA7Q6ZV29 1317 aa21.04■□□□□ 0.96
DDR1-278ENST00000515233 LY75O60449 1722 aa21.03■□□□□ 0.96
DDR1-278ENST00000515233 COL24A1Q17RW2 1714 aa21.03■□□□□ 0.96
DDR1-278ENST00000515233 USP47Q96K76 1375 aa21.02■□□□□ 0.96
DDR1-278ENST00000515233 CDCA8Q53HL2 280 aa21.02■□□□□ 0.96
DDR1-278ENST00000515233 TFCP2L1Q9NZI6 479 aa21.02■□□□□ 0.96
DDR1-278ENST00000515233 UTRNP46939 3433 aa21.01■□□□□ 0.95
DDR1-278ENST00000515233 RAPGEF4Q8WZA2 1011 aa21.01■□□□□ 0.95
DDR1-278ENST00000515233 INSRP06213 1382 aa21■□□□□ 0.95
DDR1-278ENST00000515233 CHD4Q14839 1912 aa21■□□□□ 0.95
DDR1-278ENST00000515233 KIF24Q5T7B8 1368 aa21■□□□□ 0.95
DDR1-278ENST00000515233 POLD1P28340 1107 aa21■□□□□ 0.95
DDR1-278ENST00000515233 KCNQ4P56696 695 aa21■□□□□ 0.95
DDR1-278ENST00000515233 SMG6Q86US8 1419 aaKnown RBP21■□□□□ 0.95
DDR1-278ENST00000515233 ZNF784Q8NCA9 323 aaPredicted RBP20.99■□□□□ 0.95
DDR1-278ENST00000515233 TATP17735 454 aaPredicted RBP20.98■□□□□ 0.95
DDR1-278ENST00000515233 TRIM26Q12899 539 aaPredicted RBP20.98■□□□□ 0.95
DDR1-278ENST00000515233 HSP90AB2PQ58FF8 381 aa20.98■□□□□ 0.95
DDR1-278ENST00000515233 USHBP1Q8N6Y0 703 aa20.98■□□□□ 0.95
DDR1-278ENST00000515233 CCNL1Q9UK58 526 aaPredicted RBP20.98■□□□□ 0.95
DDR1-278ENST00000515233 TUBGCP6Q96RT7 1819 aa20.97■□□□□ 0.95
DDR1-278ENST00000515233 FLT4P35916 1363 aa20.97■□□□□ 0.95
DDR1-278ENST00000515233 KIF20BQ96Q89 1820 aa20.95■□□□□ 0.94
DDR1-278ENST00000515233 HMGB2P26583 209 aaKnown RBP20.95■□□□□ 0.94
DDR1-278ENST00000515233 CARD14Q9BXL6 1004 aa20.95■□□□□ 0.94
DDR1-278ENST00000515233 GPR162Q16538 588 aa20.94■□□□□ 0.94
DDR1-278ENST00000515233 PCDH11XQ9BZA7 1347 aa20.94■□□□□ 0.94
DDR1-278ENST00000515233 PCDH11YQ9BZA8 1340 aa20.94■□□□□ 0.94
DDR1-278ENST00000515233 TIMELESSQ9UNS1 1208 aa20.93■□□□□ 0.94
DDR1-278ENST00000515233 COL23A1Q86Y22 540 aaPredicted RBP20.92■□□□□ 0.94
DDR1-278ENST00000515233 CYP27B1O15528 508 aa20.91■□□□□ 0.94
DDR1-278ENST00000515233 KLHL34Q8N239 644 aa20.9■□□□□ 0.94
DDR1-278ENST00000515233 EMILIN1Q9Y6C2 1016 aa20.89■□□□□ 0.93
DDR1-278ENST00000515233 NSD3Q9BZ95 1437 aa20.88■□□□□ 0.93
DDR1-278ENST00000515233 MPRIPQ6WCQ1 1025 aa20.88■□□□□ 0.93
DDR1-278ENST00000515233 FLAD1Q8NFF5 587 aa20.88■□□□□ 0.93
DDR1-278ENST00000515233 NCAPD2Q15021 1401 aa20.87■□□□□ 0.93
DDR1-278ENST00000515233 MSH5O43196 834 aa20.87■□□□□ 0.93
DDR1-278ENST00000515233 NKX1-1Q15270 411 aaPredicted RBP20.87■□□□□ 0.93
DDR1-278ENST00000515233 NLGN2Q8NFZ4 835 aa20.87■□□□□ 0.93
DDR1-278ENST00000515233 C5P01031 1676 aa20.86■□□□□ 0.93
DDR1-278ENST00000515233 PALLDQ8WX93 1383 aa20.86■□□□□ 0.93
DDR1-278ENST00000515233 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
DDR1-278ENST00000515233 TAF1LQ8IZX4 1826 aa20.86■□□□□ 0.93
DDR1-278ENST00000515233 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
DDR1-278ENST00000515233 PKD1L3Q7Z443 1732 aa20.86■□□□□ 0.93
DDR1-278ENST00000515233 ITGB4P16144 1822 aa20.85■□□□□ 0.93
DDR1-278ENST00000515233 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.84■□□□□ 0.93
DDR1-278ENST00000515233 SPG7Q9UQ90 795 aa20.84■□□□□ 0.93
DDR1-278ENST00000515233 ANKRD26Q9UPS8 1709 aa20.84■□□□□ 0.93
DDR1-278ENST00000515233 MAP2P11137 1827 aaKnown RBP20.83■□□□□ 0.93
DDR1-278ENST00000515233 PPM1GO15355 546 aaPredicted RBP20.83■□□□□ 0.93
DDR1-278ENST00000515233 PELP1Q8IZL8 1130 aaKnown RBP20.83■□□□□ 0.93
DDR1-278ENST00000515233 TOGARAM1Q9Y4F4 1720 aa20.83■□□□□ 0.92
DDR1-278ENST00000515233 GRIN3BO60391 1043 aa20.82■□□□□ 0.92
DDR1-278ENST00000515233 PIGBQ92521 554 aa20.82■□□□□ 0.92
DDR1-278ENST00000515233 C1QTNF8P60827 252 aa20.81■□□□□ 0.92
DDR1-278ENST00000515233 EYA1Q99502 592 aa20.81■□□□□ 0.92
DDR1-278ENST00000515233 POLKQ9UBT6 870 aa20.81■□□□□ 0.92
DDR1-278ENST00000515233 GOLGB1Q14789 3259 aaKnown RBP20.81■□□□□ 0.92
DDR1-278ENST00000515233 CLSPNQ9HAW4 1339 aa20.8■□□□□ 0.92
DDR1-278ENST00000515233 MSL1Q68DK7 614 aa20.8■□□□□ 0.92
DDR1-278ENST00000515233 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
DDR1-278ENST00000515233 C4BP0C0L5 1744 aa20.8■□□□□ 0.92
DDR1-278ENST00000515233 YBX3P16989 372 aaKnown RBP eCLIP20.79■□□□□ 0.92
DDR1-278ENST00000515233 AK7Q96M32 723 aa20.78■□□□□ 0.92
DDR1-278ENST00000515233 IFNL2Q8IZJ0 200 aa20.77■□□□□ 0.92
DDR1-278ENST00000515233 UBR3Q6ZT12 1888 aa20.76■□□□□ 0.91
DDR1-278ENST00000515233 LOC102724428A0A0B4J2F2 783 aa20.76■□□□□ 0.91
DDR1-278ENST00000515233 SIK1P57059 783 aa20.76■□□□□ 0.91
DDR1-278ENST00000515233 AMIGO3Q86WK7 504 aa20.76■□□□□ 0.91
DDR1-278ENST00000515233 PLEKHG2Q9H7P9 1386 aa20.75■□□□□ 0.91
DDR1-278ENST00000515233 PHKG2P15735 406 aa20.75■□□□□ 0.91
DDR1-278ENST00000515233 SSFA2P28290 1259 aa20.75■□□□□ 0.91
DDR1-278ENST00000515233 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
DDR1-278ENST00000515233 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.74■□□□□ 0.91
DDR1-278ENST00000515233 EIF4A2Q14240 407 aaKnown RBP20.74■□□□□ 0.91
DDR1-278ENST00000515233 ASAP1Q9ULH1 1129 aa20.73■□□□□ 0.91
DDR1-278ENST00000515233 SENP3-EIF4A1A0A087X0R7 540 aa20.72■□□□□ 0.91
DDR1-278ENST00000515233 GIGYF1O75420 1035 aaPredicted RBP20.72■□□□□ 0.91
DDR1-278ENST00000515233 LINC00116Q8NCU8 138 aa20.72■□□□□ 0.91
DDR1-278ENST00000515233 PHF14O94880 888 aa20.71■□□□□ 0.91
DDR1-278ENST00000515233 ATG3Q9NT62 314 aa20.71■□□□□ 0.91
DDR1-278ENST00000515233 ATP6V1AP38606 617 aa20.7■□□□□ 0.9
DDR1-278ENST00000515233 SMIM5Q71RC9 77 aa20.7■□□□□ 0.9
DDR1-278ENST00000515233 POLR3GLQ9BT43 218 aa20.7■□□□□ 0.9
DDR1-278ENST00000515233 IGSF1Q8N6C5 1336 aa20.7■□□□□ 0.9
DDR1-278ENST00000515233 TNNT2P45379 298 aaPredicted RBP20.69■□□□□ 0.9
DDR1-278ENST00000515233 ITPK1Q13572 414 aa20.69■□□□□ 0.9
DDR1-278ENST00000515233 ERVV-2B6SEH9 535 aa20.68■□□□□ 0.9
DDR1-278ENST00000515233 EIF4G2P78344 907 aaKnown RBP eCLIP20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms