RNA–Protein interactions for RNA: ENST00000515022.5

TRIM6-211, Transcript of tripartite motif containing 6, humanhuman

TSL 2 BASIC

Gene TRIM6, Length 1,060 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-211ENST00000515022 BRD4O60885 1362 aaPredicted RBP12.18□□□□□ -0.46
TRIM6-211ENST00000515022 TTC21BQ7Z4L5 1316 aa12.18□□□□□ -0.46
TRIM6-211ENST00000515022 QRICH2Q9H0J4 1663 aa12.18□□□□□ -0.46
TRIM6-211ENST00000515022 TRPM1Q7Z4N2 1603 aa12.18□□□□□ -0.46
TRIM6-211ENST00000515022 CCDC7Q96M83 1385 aa12.18□□□□□ -0.46
TRIM6-211ENST00000515022 MSL1Q68DK7 614 aa12.17□□□□□ -0.46
TRIM6-211ENST00000515022 SPDYE1Q8NFV5 336 aaPredicted RBP12.17□□□□□ -0.46
TRIM6-211ENST00000515022 STAC3Q96MF2 364 aa12.17□□□□□ -0.46
TRIM6-211ENST00000515022 TFCP2L1Q9NZI6 479 aa12.17□□□□□ -0.46
TRIM6-211ENST00000515022 COL24A1Q17RW2 1714 aa12.17□□□□□ -0.46
TRIM6-211ENST00000515022 NFAT5O94916 1531 aa12.16□□□□□ -0.46
TRIM6-211ENST00000515022 ABCC6O95255 1503 aa12.16□□□□□ -0.46
TRIM6-211ENST00000515022 KCNH5Q8NCM2 988 aa12.16□□□□□ -0.46
TRIM6-211ENST00000515022 WWC3Q9ULE0 1092 aa12.16□□□□□ -0.46
TRIM6-211ENST00000515022 KIAA1210Q9ULL0 1709 aa12.16□□□□□ -0.46
TRIM6-211ENST00000515022 QSER1Q2KHR3 1735 aa12.15□□□□□ -0.46
TRIM6-211ENST00000515022 GRIN3BO60391 1043 aa12.15□□□□□ -0.46
TRIM6-211ENST00000515022 IL2RBP14784 551 aa12.15□□□□□ -0.46
TRIM6-211ENST00000515022 HSPA6P17066 643 aa12.15□□□□□ -0.46
TRIM6-211ENST00000515022 DDX54Q8TDD1 881 aaKnown RBP12.15□□□□□ -0.46
TRIM6-211ENST00000515022 SLC16A10Q8TF71 515 aa12.15□□□□□ -0.46
TRIM6-211ENST00000515022 GPBP1L1Q9HC44 474 aaPredicted RBP12.15□□□□□ -0.46
TRIM6-211ENST00000515022 SYTL4Q96C24 671 aaPredicted RBP12.14□□□□□ -0.47
TRIM6-211ENST00000515022 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.13□□□□□ -0.47
TRIM6-211ENST00000515022 PRIM1P49642 420 aaKnown RBP12.12□□□□□ -0.47
TRIM6-211ENST00000515022 SLC27A3Q5K4L6 730 aa12.12□□□□□ -0.47
TRIM6-211ENST00000515022 COL23A1Q86Y22 540 aaPredicted RBP12.12□□□□□ -0.47
TRIM6-211ENST00000515022 ANKRD24Q8TF21 1146 aa12.12□□□□□ -0.47
TRIM6-211ENST00000515022 LTN1O94822 1766 aa12.12□□□□□ -0.47
TRIM6-211ENST00000515022 ERBB3P21860 1342 aa12.11□□□□□ -0.47
TRIM6-211ENST00000515022 LTV1Q96GA3 475 aaPredicted RBP12.11□□□□□ -0.47
TRIM6-211ENST00000515022 FBXO3Q9UK99 471 aa12.11□□□□□ -0.47
TRIM6-211ENST00000515022 KTN1Q86UP2 1357 aaKnown RBP12.1□□□□□ -0.47
TRIM6-211ENST00000515022 PITPNM1O00562 1244 aa12.1□□□□□ -0.47
TRIM6-211ENST00000515022 NME9Q86XW9 330 aa12.1□□□□□ -0.47
TRIM6-211ENST00000515022 EVC2Q86UK5 1308 aa12.1□□□□□ -0.47
TRIM6-211ENST00000515022 TTC21AQ8NDW8 1320 aa12.1□□□□□ -0.47
TRIM6-211ENST00000515022 CLEC11AQ9Y240 323 aa12.09□□□□□ -0.47
TRIM6-211ENST00000515022 DOT1LQ8TEK3 1739 aa12.08□□□□□ -0.47
TRIM6-211ENST00000515022 CCNL1Q9UK58 526 aaPredicted RBP12.08□□□□□ -0.48
TRIM6-211ENST00000515022 LY75O60449 1722 aa12.08□□□□□ -0.48
TRIM6-211ENST00000515022 ADCY9O60503 1353 aa12.07□□□□□ -0.48
TRIM6-211ENST00000515022 NSD2O96028 1365 aa12.07□□□□□ -0.48
TRIM6-211ENST00000515022 SMIM5Q71RC9 77 aa12.07□□□□□ -0.48
TRIM6-211ENST00000515022 KIF3CO14782 793 aa12.06□□□□□ -0.48
TRIM6-211ENST00000515022 MON2Q7Z3U7 1717 aa12.06□□□□□ -0.48
TRIM6-211ENST00000515022 RGPD2P0DJD1 1756 aa12.05□□□□□ -0.48
TRIM6-211ENST00000515022 CD2APQ9Y5K6 639 aa12.04□□□□□ -0.48
TRIM6-211ENST00000515022 USP31Q70CQ4 1352 aa12.04□□□□□ -0.48
TRIM6-211ENST00000515022 ANKRD36BQ8N2N9 1353 aa12.04□□□□□ -0.48
TRIM6-211ENST00000515022 FBLN1P23142 703 aa12.03□□□□□ -0.48
TRIM6-211ENST00000515022 AMIGO3Q86WK7 504 aa12.03□□□□□ -0.48
TRIM6-211ENST00000515022 IGSF1Q8N6C5 1336 aa12.03□□□□□ -0.48
TRIM6-211ENST00000515022 HTRA3P83110 453 aa12.02□□□□□ -0.49
TRIM6-211ENST00000515022 DNAJC5GQ8N7S2 189 aa12.02□□□□□ -0.49
TRIM6-211ENST00000515022 TMC1Q8TDI8 760 aa12.02□□□□□ -0.49
TRIM6-211ENST00000515022 SBNO2Q9Y2G9 1366 aa12.02□□□□□ -0.49
TRIM6-211ENST00000515022 C5P01031 1676 aa12.01□□□□□ -0.49
TRIM6-211ENST00000515022 APLP1P51693 650 aa12.01□□□□□ -0.49
TRIM6-211ENST00000515022 ZCRB1Q8TBF4 217 aaKnown RBP12.01□□□□□ -0.49
TRIM6-211ENST00000515022 USP54Q70EL1 1684 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 PCNTO95613 3336 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 PHF14O94880 888 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 COL13A1Q5TAT6 717 aaPredicted RBP12□□□□□ -0.49
TRIM6-211ENST00000515022 CHRDL2Q6WN34 429 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 USHBP1Q8N6Y0 703 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 IP6K1Q92551 441 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 L3MBTL2Q969R5 705 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 USP47Q96K76 1375 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 CD163L1Q9NR16 1453 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 MEGF6O75095 1541 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 TAF1LQ8IZX4 1826 aa12□□□□□ -0.49
TRIM6-211ENST00000515022 PRR29P0C7W0 189 aa11.99□□□□□ -0.49
TRIM6-211ENST00000515022 SLC12A5Q9H2X9 1139 aa11.99□□□□□ -0.49
TRIM6-211ENST00000515022 FAM208AQ9UK61 1670 aaKnown RBP11.99□□□□□ -0.49
TRIM6-211ENST00000515022 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
TRIM6-211ENST00000515022 NMRK2Q9NPI5 230 aa11.98□□□□□ -0.49
TRIM6-211ENST00000515022 TOGARAM1Q9Y4F4 1720 aa11.97□□□□□ -0.49
TRIM6-211ENST00000515022 ROCK2O75116 1388 aaKnown RBP11.96□□□□□ -0.49
TRIM6-211ENST00000515022 MPRIPQ6WCQ1 1025 aa11.96□□□□□ -0.49
TRIM6-211ENST00000515022 HDGFL2Q7Z4V5 671 aaPredicted RBP11.96□□□□□ -0.49
TRIM6-211ENST00000515022 UBR3Q6ZT12 1888 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 N4BP2Q86UW6 1770 aaPredicted RBP11.95□□□□□ -0.5
TRIM6-211ENST00000515022 PALLDQ8WX93 1383 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 C4BP0C0L5 1744 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 WDR90Q96KV7 1748 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 MAP3K19Q56UN5 1328 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 HOXC9P31274 260 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 AMPHP49418 695 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 AK7Q96M32 723 aa11.95□□□□□ -0.5
TRIM6-211ENST00000515022 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.94□□□□□ -0.5
TRIM6-211ENST00000515022 TOMM70O94826 608 aa11.94□□□□□ -0.5
TRIM6-211ENST00000515022 NBPF6Q5VWK0 638 aa11.94□□□□□ -0.5
TRIM6-211ENST00000515022 FLAD1Q8NFF5 587 aa11.94□□□□□ -0.5
TRIM6-211ENST00000515022 NBPF4Q96M43 638 aa11.94□□□□□ -0.5
TRIM6-211ENST00000515022 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
TRIM6-211ENST00000515022 EDC4Q6P2E9 1401 aaKnown RBP11.94□□□□□ -0.5
TRIM6-211ENST00000515022 A0A1W2PP64 1363 aa11.93□□□□□ -0.5
TRIM6-211ENST00000515022 ITGB4P16144 1822 aa11.93□□□□□ -0.5
TRIM6-211ENST00000515022 ARHGAP27Q6ZUM4 889 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms