RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 KIF7Q2M1P5 1343 aa33.63■■■□□ 2.97
SNF8-213ENST00000514929 NSD2O96028 1365 aa33.61■■■□□ 2.97
SNF8-213ENST00000514929 WASHC2AQ641Q2 1341 aa33.61■■■□□ 2.97
SNF8-213ENST00000514929 POLKQ9UBT6 870 aa33.61■■■□□ 2.97
SNF8-213ENST00000514929 TATP17735 454 aaPredicted RBP33.6■■■□□ 2.97
SNF8-213ENST00000514929 KNSTRNQ9Y448 316 aa33.59■■■□□ 2.97
SNF8-213ENST00000514929 LRP5O75197 1615 aa33.59■■■□□ 2.97
SNF8-213ENST00000514929 TXNRD1Q16881 649 aa33.57■■■□□ 2.96
SNF8-213ENST00000514929 PROM2Q8N271 834 aa33.57■■■□□ 2.96
SNF8-213ENST00000514929 SHANK3Q9BYB0 1731 aa33.56■■■□□ 2.96
SNF8-213ENST00000514929 KAT6BQ8WYB5 2073 aa33.56■■■□□ 2.96
SNF8-213ENST00000514929 BTAF1O14981 1849 aa33.54■■■□□ 2.96
SNF8-213ENST00000514929 MORC1Q86VD1 984 aa33.54■■■□□ 2.96
SNF8-213ENST00000514929 SYTL4Q96C24 671 aaPredicted RBP33.52■■■□□ 2.96
SNF8-213ENST00000514929 ANO8Q9HCE9 1232 aaPredicted RBP33.5■■■□□ 2.95
SNF8-213ENST00000514929 DOT1LQ8TEK3 1739 aa33.5■■■□□ 2.95
SNF8-213ENST00000514929 PRIM1P49642 420 aaKnown RBP33.49■■■□□ 2.95
SNF8-213ENST00000514929 EYA1Q99502 592 aa33.49■■■□□ 2.95
SNF8-213ENST00000514929 PCDH11XQ9BZA7 1347 aa33.49■■■□□ 2.95
SNF8-213ENST00000514929 PCDH11YQ9BZA8 1340 aa33.49■■■□□ 2.95
SNF8-213ENST00000514929 NCAPD2Q15021 1401 aa33.48■■■□□ 2.95
SNF8-213ENST00000514929 EIF4A2Q14240 407 aaKnown RBP33.47■■■□□ 2.95
SNF8-213ENST00000514929 STK32BQ9NY57 414 aa33.45■■■□□ 2.95
SNF8-213ENST00000514929 AMER1Q5JTC6 1135 aaPredicted RBP33.44■■■□□ 2.94
SNF8-213ENST00000514929 SPG7Q9UQ90 795 aa33.41■■■□□ 2.94
SNF8-213ENST00000514929 PKD1L3Q7Z443 1732 aa33.41■■■□□ 2.94
SNF8-213ENST00000514929 SLC15A2Q16348 729 aa33.4■■■□□ 2.94
SNF8-213ENST00000514929 CYP27B1O15528 508 aa33.39■■■□□ 2.94
SNF8-213ENST00000514929 PER1O15534 1290 aaPredicted RBP33.37■■■□□ 2.93
SNF8-213ENST00000514929 SPON1Q9HCB6 807 aa33.36■■■□□ 2.93
SNF8-213ENST00000514929 IGSF1Q8N6C5 1336 aa33.35■■■□□ 2.93
SNF8-213ENST00000514929 SLC27A3Q5K4L6 730 aa33.35■■■□□ 2.93
SNF8-213ENST00000514929 LRRC4BQ9NT99 713 aa33.35■■■□□ 2.93
SNF8-213ENST00000514929 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP33.35■■■□□ 2.93
SNF8-213ENST00000514929 PAPPAQ13219 1627 aa33.33■■■□□ 2.93
SNF8-213ENST00000514929 CC2D1BQ5T0F9 858 aaKnown RBP33.33■■■□□ 2.93
SNF8-213ENST00000514929 CASZ1Q86V15 1759 aa33.33■■■□□ 2.93
SNF8-213ENST00000514929 PDGFDQ9GZP0 370 aaPredicted RBP33.32■■■□□ 2.92
SNF8-213ENST00000514929 MPRIPQ6WCQ1 1025 aa33.3■■■□□ 2.92
SNF8-213ENST00000514929 LY75O60449 1722 aa33.29■■■□□ 2.92
SNF8-213ENST00000514929 NKX1-1Q15270 411 aaPredicted RBP33.28■■■□□ 2.92
SNF8-213ENST00000514929 PLEKHG2Q9H7P9 1386 aa33.28■■■□□ 2.92
SNF8-213ENST00000514929 KCNQ4P56696 695 aa33.27■■■□□ 2.92
SNF8-213ENST00000514929 ZNF827Q17R98 1081 aa33.27■■■□□ 2.92
SNF8-213ENST00000514929 IFNL2Q8IZJ0 200 aa33.27■■■□□ 2.92
SNF8-213ENST00000514929 PPP1R1BQ9UD71 204 aaPredicted RBP33.27■■■□□ 2.92
SNF8-213ENST00000514929 TOGARAM1Q9Y4F4 1720 aa33.27■■■□□ 2.92
SNF8-213ENST00000514929 ZBTB7AO95365 584 aa33.26■■■□□ 2.91
SNF8-213ENST00000514929 MTHFSP49914 203 aa33.26■■■□□ 2.91
SNF8-213ENST00000514929 CNGB1Q14028 1251 aaPredicted RBP33.26■■■□□ 2.91
SNF8-213ENST00000514929 CCNL1Q9UK58 526 aaPredicted RBP33.26■■■□□ 2.91
SNF8-213ENST00000514929 PHKG2P15735 406 aa33.25■■■□□ 2.91
SNF8-213ENST00000514929 ITGB4P16144 1822 aa33.23■■■□□ 2.91
SNF8-213ENST00000514929 NPC1L1Q9UHC9 1359 aa33.23■■■□□ 2.91
SNF8-213ENST00000514929 IL13P35225 146 aa33.22■■■□□ 2.91
SNF8-213ENST00000514929 PLEKHO1Q53GL0 409 aaPredicted RBP33.22■■■□□ 2.91
SNF8-213ENST00000514929 AKT1S1Q96B36 256 aa33.22■■■□□ 2.91
SNF8-213ENST00000514929 AEBP1Q8IUX7 1158 aa33.21■■■□□ 2.91
SNF8-213ENST00000514929 PALLDQ8WX93 1383 aa33.21■■■□□ 2.91
SNF8-213ENST00000514929 SULT6B1Q6IMI4 303 aa33.2■■■□□ 2.91
SNF8-213ENST00000514929 ATF5Q9Y2D1 282 aaPredicted RBP33.2■■■□□ 2.91
SNF8-213ENST00000514929 AMOTQ4VCS5 1084 aa33.18■■■□□ 2.9
SNF8-213ENST00000514929 PIGBQ92521 554 aa33.18■■■□□ 2.9
SNF8-213ENST00000514929 SMARCC1Q92922 1105 aaPredicted RBP33.18■■■□□ 2.9
SNF8-213ENST00000514929 MTFR1LQ9H019 292 aa33.18■■■□□ 2.9
SNF8-213ENST00000514929 TMOD3Q9NYL9 352 aa33.18■■■□□ 2.9
SNF8-213ENST00000514929 TFCP2L1Q9NZI6 479 aa33.18■■■□□ 2.9
SNF8-213ENST00000514929 ZNF530Q6P9A1 599 aaPredicted RBP33.16■■■□□ 2.9
SNF8-213ENST00000514929 KDRP35968 1356 aa33.15■■■□□ 2.9
SNF8-213ENST00000514929 HSP90AB1P08238 724 aaKnown RBP33.14■■■□□ 2.9
SNF8-213ENST00000514929 HMGB2P26583 209 aaKnown RBP33.13■■■□□ 2.89
SNF8-213ENST00000514929 QSER1Q2KHR3 1735 aa33.13■■■□□ 2.89
SNF8-213ENST00000514929 DIAPH1O60610 1272 aaKnown RBP33.12■■■□□ 2.89
SNF8-213ENST00000514929 PTGER2P43116 358 aa33.12■■■□□ 2.89
SNF8-213ENST00000514929 PNPLA7Q6ZV29 1317 aa33.11■■■□□ 2.89
SNF8-213ENST00000514929 DCAF5Q96JK2 942 aa33.11■■■□□ 2.89
SNF8-213ENST00000514929 C5P01031 1676 aa33.1■■■□□ 2.89
SNF8-213ENST00000514929 C1orf141Q5JVX7 400 aa33.1■■■□□ 2.89
SNF8-213ENST00000514929 TUBGCP6Q96RT7 1819 aa33.09■■■□□ 2.89
SNF8-213ENST00000514929 ERVV-2B6SEH9 535 aa33.08■■■□□ 2.89
SNF8-213ENST00000514929 SLC16A10Q8TF71 515 aa33.08■■■□□ 2.89
SNF8-213ENST00000514929 HMOX1P09601 288 aa33.07■■■□□ 2.88
SNF8-213ENST00000514929 ASAP1Q9ULH1 1129 aa33.06■■■□□ 2.88
SNF8-213ENST00000514929 TAF1LQ8IZX4 1826 aa33.05■■■□□ 2.88
SNF8-213ENST00000514929 KDM6AO15550 1401 aaPredicted RBP33.04■■■□□ 2.88
SNF8-213ENST00000514929 LOC102724428A0A0B4J2F2 783 aa33.04■■■□□ 2.88
SNF8-213ENST00000514929 MSH5O43196 834 aa33.04■■■□□ 2.88
SNF8-213ENST00000514929 SIK1P57059 783 aa33.04■■■□□ 2.88
SNF8-213ENST00000514929 SGIP1Q9BQI5 828 aa33.04■■■□□ 2.88
SNF8-213ENST00000514929 ATG3Q9NT62 314 aa33.03■■■□□ 2.88
SNF8-213ENST00000514929 CABP4P57796 275 aa33.02■■■□□ 2.88
SNF8-213ENST00000514929 COL3A1P02461 1466 aaPredicted RBP33.01■■■□□ 2.88
SNF8-213ENST00000514929 C4BP0C0L5 1744 aa33■■■□□ 2.87
SNF8-213ENST00000514929 U2SURPO15042 1029 aaKnown RBP32.99■■■□□ 2.87
SNF8-213ENST00000514929 COL23A1Q86Y22 540 aaPredicted RBP32.99■■■□□ 2.87
SNF8-213ENST00000514929 AK7Q96M32 723 aa32.99■■■□□ 2.87
SNF8-213ENST00000514929 ARXQ96QS3 562 aa32.99■■■□□ 2.87
SNF8-213ENST00000514929 AKAP4Q5JQC9 854 aa32.98■■■□□ 2.87
SNF8-213ENST00000514929 CFAP53Q96M91 514 aa32.98■■■□□ 2.87
SNF8-213ENST00000514929 POLD1P28340 1107 aa32.97■■■□□ 2.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms