RNA–Protein interactions for RNA: ENST00000514831.1

SMAD1-214, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-214ENST00000514831 RTL1A6NKG5 1358 aa32.23■■■□□ 2.75
SMAD1-214ENST00000514831 PNPLA7Q6ZV29 1317 aa32.23■■■□□ 2.75
SMAD1-214ENST00000514831 ST20-MTHFSA0A0A6YYL1 179 aa32.2■■■□□ 2.75
SMAD1-214ENST00000514831 SLC24A1O60721 1099 aa32.19■■■□□ 2.74
SMAD1-214ENST00000514831 AMPHP49418 695 aa32.19■■■□□ 2.74
SMAD1-214ENST00000514831 SYTL4Q96C24 671 aaPredicted RBP32.19■■■□□ 2.74
SMAD1-214ENST00000514831 PRIM1P49642 420 aaKnown RBP32.18■■■□□ 2.74
SMAD1-214ENST00000514831 FBLN1P23142 703 aa32.16■■■□□ 2.74
SMAD1-214ENST00000514831 POLD1P28340 1107 aa32.16■■■□□ 2.74
SMAD1-214ENST00000514831 ZCRB1Q8TBF4 217 aaKnown RBP32.16■■■□□ 2.74
SMAD1-214ENST00000514831 TFCP2L1Q9NZI6 479 aa32.15■■■□□ 2.74
SMAD1-214ENST00000514831 KCNQ4P56696 695 aa32.13■■■□□ 2.73
SMAD1-214ENST00000514831 KIF20BQ96Q89 1820 aa32.13■■■□□ 2.73
SMAD1-214ENST00000514831 SMG6Q86US8 1419 aaKnown RBP32.11■■■□□ 2.73
SMAD1-214ENST00000514831 CGNL1Q0VF96 1302 aa32.11■■■□□ 2.73
SMAD1-214ENST00000514831 GPR162Q16538 588 aa32.11■■■□□ 2.73
SMAD1-214ENST00000514831 C5P01031 1676 aa32.1■■■□□ 2.73
SMAD1-214ENST00000514831 RRS1Q15050 365 aaKnown RBP32.09■■■□□ 2.73
SMAD1-214ENST00000514831 KLHL34Q8N239 644 aa32.09■■■□□ 2.73
SMAD1-214ENST00000514831 CCNL1Q9UK58 526 aaPredicted RBP32.09■■■□□ 2.73
SMAD1-214ENST00000514831 USP47Q96K76 1375 aa32.08■■■□□ 2.73
SMAD1-214ENST00000514831 NBPF6Q5VWK0 638 aa32.08■■■□□ 2.73
SMAD1-214ENST00000514831 NBPF4Q96M43 638 aa32.08■■■□□ 2.73
SMAD1-214ENST00000514831 FYB1O15117 783 aa32.07■■■□□ 2.72
SMAD1-214ENST00000514831 GGNBP2Q9H3C7 697 aa32.05■■■□□ 2.72
SMAD1-214ENST00000514831 RAPGEF4Q8WZA2 1011 aa32.04■■■□□ 2.72
SMAD1-214ENST00000514831 TAF1LQ8IZX4 1826 aa32.04■■■□□ 2.72
SMAD1-214ENST00000514831 TMF1P82094 1093 aa32.03■■■□□ 2.72
SMAD1-214ENST00000514831 USHBP1Q8N6Y0 703 aa32.03■■■□□ 2.72
SMAD1-214ENST00000514831 INSRP06213 1382 aa32.03■■■□□ 2.72
SMAD1-214ENST00000514831 NLGN2Q8NFZ4 835 aa32.02■■■□□ 2.72
SMAD1-214ENST00000514831 KIF24Q5T7B8 1368 aa32.02■■■□□ 2.72
SMAD1-214ENST00000514831 FLT4P35916 1363 aa32.01■■■□□ 2.71
SMAD1-214ENST00000514831 PCDH11XQ9BZA7 1347 aa32■■■□□ 2.71
SMAD1-214ENST00000514831 PCDH11YQ9BZA8 1340 aa32■■■□□ 2.71
SMAD1-214ENST00000514831 PKD1L3Q7Z443 1732 aa32■■■□□ 2.71
SMAD1-214ENST00000514831 TOGARAM1Q9Y4F4 1720 aa32■■■□□ 2.71
SMAD1-214ENST00000514831 C1QTNF8P60827 252 aa32■■■□□ 2.71
SMAD1-214ENST00000514831 TATP17735 454 aaPredicted RBP31.99■■■□□ 2.71
SMAD1-214ENST00000514831 COL23A1Q86Y22 540 aaPredicted RBP31.99■■■□□ 2.71
SMAD1-214ENST00000514831 PELP1Q8IZL8 1130 aaKnown RBP31.98■■■□□ 2.71
SMAD1-214ENST00000514831 ITGB4P16144 1822 aa31.98■■■□□ 2.71
SMAD1-214ENST00000514831 HSP90AB2PQ58FF8 381 aa31.96■■■□□ 2.71
SMAD1-214ENST00000514831 ANKRD26Q9UPS8 1709 aa31.96■■■□□ 2.71
SMAD1-214ENST00000514831 SENP3-EIF4A1A0A087X0R7 540 aa31.95■■■□□ 2.71
SMAD1-214ENST00000514831 MSH5O43196 834 aa31.95■■■□□ 2.71
SMAD1-214ENST00000514831 PALLDQ8WX93 1383 aa31.94■■■□□ 2.7
SMAD1-214ENST00000514831 GOLGB1Q14789 3259 aaKnown RBP31.94■■■□□ 2.7
SMAD1-214ENST00000514831 C4BP0C0L5 1744 aa31.93■■■□□ 2.7
SMAD1-214ENST00000514831 HMGB2P26583 209 aaKnown RBP31.93■■■□□ 2.7
SMAD1-214ENST00000514831 NCAPD2Q15021 1401 aa31.92■■■□□ 2.7
SMAD1-214ENST00000514831 CDCA8Q53HL2 280 aa31.91■■■□□ 2.7
SMAD1-214ENST00000514831 YBX3P16989 372 aaKnown RBP eCLIP31.9■■■□□ 2.7
SMAD1-214ENST00000514831 CYP27B1O15528 508 aa31.89■■■□□ 2.7
SMAD1-214ENST00000514831 GRIN3BO60391 1043 aa31.89■■■□□ 2.7
SMAD1-214ENST00000514831 GIGYF1O75420 1035 aaPredicted RBP31.89■■■□□ 2.7
SMAD1-214ENST00000514831 MSL1Q68DK7 614 aa31.89■■■□□ 2.7
SMAD1-214ENST00000514831 UBR3Q6ZT12 1888 aa31.89■■■□□ 2.69
SMAD1-214ENST00000514831 FLAD1Q8NFF5 587 aa31.88■■■□□ 2.69
SMAD1-214ENST00000514831 NSD3Q9BZ95 1437 aa31.87■■■□□ 2.69
SMAD1-214ENST00000514831 MPRIPQ6WCQ1 1025 aa31.87■■■□□ 2.69
SMAD1-214ENST00000514831 MAP2P11137 1827 aaKnown RBP31.85■■■□□ 2.69
SMAD1-214ENST00000514831 SMARCC1Q92922 1105 aaPredicted RBP31.84■■■□□ 2.69
SMAD1-214ENST00000514831 EMILIN1Q9Y6C2 1016 aa31.84■■■□□ 2.69
SMAD1-214ENST00000514831 CARD14Q9BXL6 1004 aa31.83■■■□□ 2.69
SMAD1-214ENST00000514831 CD2APQ9Y5K6 639 aa31.83■■■□□ 2.69
SMAD1-214ENST00000514831 NKX1-1Q15270 411 aaPredicted RBP31.79■■■□□ 2.68
SMAD1-214ENST00000514831 AK7Q96M32 723 aa31.79■■■□□ 2.68
SMAD1-214ENST00000514831 PIGBQ92521 554 aa31.77■■■□□ 2.68
SMAD1-214ENST00000514831 AMIGO3Q86WK7 504 aa31.76■■■□□ 2.67
SMAD1-214ENST00000514831 SPG7Q9UQ90 795 aa31.76■■■□□ 2.67
SMAD1-214ENST00000514831 ATP10DQ9P241 1426 aa31.75■■■□□ 2.67
SMAD1-214ENST00000514831 WASHC2AQ641Q2 1341 aa31.75■■■□□ 2.67
SMAD1-214ENST00000514831 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP31.73■■■□□ 2.67
SMAD1-214ENST00000514831 PPM1GO15355 546 aaPredicted RBP31.72■■■□□ 2.67
SMAD1-214ENST00000514831 ADCY9O60503 1353 aa31.71■■■□□ 2.67
SMAD1-214ENST00000514831 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP31.71■■■□□ 2.67
SMAD1-214ENST00000514831 SSFA2P28290 1259 aa31.71■■■□□ 2.67
SMAD1-214ENST00000514831 LOC102724428A0A0B4J2F2 783 aa31.7■■■□□ 2.67
SMAD1-214ENST00000514831 PHF14O94880 888 aa31.7■■■□□ 2.67
SMAD1-214ENST00000514831 SIK1P57059 783 aa31.7■■■□□ 2.67
SMAD1-214ENST00000514831 EYA1Q99502 592 aa31.7■■■□□ 2.67
SMAD1-214ENST00000514831 PLEKHG2Q9H7P9 1386 aa31.68■■■□□ 2.66
SMAD1-214ENST00000514831 LINC00116Q8NCU8 138 aa31.68■■■□□ 2.66
SMAD1-214ENST00000514831 TMOD3Q9NYL9 352 aa31.68■■■□□ 2.66
SMAD1-214ENST00000514831 SMIM5Q71RC9 77 aa31.66■■■□□ 2.66
SMAD1-214ENST00000514831 IGSF1Q8N6C5 1336 aa31.66■■■□□ 2.66
SMAD1-214ENST00000514831 ZNF831Q5JPB2 1677 aa31.65■■■□□ 2.66
SMAD1-214ENST00000514831 PHKG2P15735 406 aa31.64■■■□□ 2.66
SMAD1-214ENST00000514831 IFNL2Q8IZJ0 200 aa31.64■■■□□ 2.66
SMAD1-214ENST00000514831 POLKQ9UBT6 870 aa31.64■■■□□ 2.66
SMAD1-214ENST00000514831 KIF13BQ9NQT8 1826 aa31.63■■■□□ 2.65
SMAD1-214ENST00000514831 ITPK1Q13572 414 aa31.63■■■□□ 2.65
SMAD1-214ENST00000514831 ASAP1Q9ULH1 1129 aa31.63■■■□□ 2.65
SMAD1-214ENST00000514831 CICQ96RK0 1608 aaPredicted RBP31.63■■■□□ 2.65
SMAD1-214ENST00000514831 KDRP35968 1356 aa31.61■■■□□ 2.65
SMAD1-214ENST00000514831 GNPATO15228 680 aa31.61■■■□□ 2.65
SMAD1-214ENST00000514831 GPBP1L1Q9HC44 474 aaPredicted RBP31.61■■■□□ 2.65
SMAD1-214ENST00000514831 TRIM26Q12899 539 aaPredicted RBP31.6■■■□□ 2.65
SMAD1-214ENST00000514831 TIMELESSQ9UNS1 1208 aa31.6■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms