RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.92■□□□□ 0.142e-6■■■□□ 15.2
PDLIM5-220ENST00000514830 MEGF6O75095 1541 aa15.92■□□□□ 0.14
PDLIM5-220ENST00000514830 DLG5Q8TDM6 1919 aa15.91■□□□□ 0.14
PDLIM5-220ENST00000514830 ONECUT3O60422 494 aaPredicted RBP15.9■□□□□ 0.14
PDLIM5-220ENST00000514830 HMOX1P09601 288 aa15.9■□□□□ 0.14
PDLIM5-220ENST00000514830 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
PDLIM5-220ENST00000514830 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
PDLIM5-220ENST00000514830 GJD4Q96KN9 370 aaPredicted RBP15.9■□□□□ 0.14
PDLIM5-220ENST00000514830 LRRC37A3O60309 1634 aa15.9■□□□□ 0.14
PDLIM5-220ENST00000514830 IL2RBP14784 551 aa15.89■□□□□ 0.13
PDLIM5-220ENST00000514830 PRKAR2BP31323 418 aa15.89■□□□□ 0.13
PDLIM5-220ENST00000514830 FAM9BQ8IZU0 186 aa15.89■□□□□ 0.13
PDLIM5-220ENST00000514830 USHBP1Q8N6Y0 703 aa15.89■□□□□ 0.13
PDLIM5-220ENST00000514830 RAPGEF4Q8WZA2 1011 aa15.89■□□□□ 0.13
PDLIM5-220ENST00000514830 TATP17735 454 aaPredicted RBP15.88■□□□□ 0.13
PDLIM5-220ENST00000514830 AMOTQ4VCS5 1084 aa15.88■□□□□ 0.13
PDLIM5-220ENST00000514830 VIRMAQ69YN4 1812 aaKnown RBP15.88■□□□□ 0.13
PDLIM5-220ENST00000514830 ADAMTS7Q9UKP4 1686 aa15.88■□□□□ 0.13
PDLIM5-220ENST00000514830 NGEFQ8N5V2 710 aa15.87■□□□□ 0.13
PDLIM5-220ENST00000514830 TNS2Q63HR2 1409 aa15.86■□□□□ 0.13
PDLIM5-220ENST00000514830 NEFMP07197 916 aa15.86■□□□□ 0.13
PDLIM5-220ENST00000514830 PLEKHO1Q53GL0 409 aaPredicted RBP15.85■□□□□ 0.13
PDLIM5-220ENST00000514830 PHACTR3Q96KR7 559 aa15.85■□□□□ 0.13
PDLIM5-220ENST00000514830 SPG7Q9UQ90 795 aa15.85■□□□□ 0.13
PDLIM5-220ENST00000514830 CCDC9Q9Y3X0 531 aaKnown RBP15.85■□□□□ 0.13
PDLIM5-220ENST00000514830 MAPK8IP3Q9UPT6 1336 aa15.85■□□□□ 0.13
PDLIM5-220ENST00000514830 SF3B2Q13435 895 aaKnown RBP15.84■□□□□ 0.13
PDLIM5-220ENST00000514830 GAS2L2Q8NHY3 880 aa15.84■□□□□ 0.13
PDLIM5-220ENST00000514830 USP35Q9P2H5 1018 aa15.84■□□□□ 0.13
PDLIM5-220ENST00000514830 SCN11AQ9UI33 1791 aa15.84■□□□□ 0.13
PDLIM5-220ENST00000514830 NFE2L2Q16236 605 aa15.83■□□□□ 0.12
PDLIM5-220ENST00000514830 BRWD3Q6RI45 1802 aa15.82■□□□□ 0.12
PDLIM5-220ENST00000514830 MTHFSDQ2M296 383 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-220ENST00000514830 CCDC146Q8IYE0 955 aa15.82■□□□□ 0.12
PDLIM5-220ENST00000514830 ZCRB1Q8TBF4 217 aaKnown RBP15.82■□□□□ 0.12
PDLIM5-220ENST00000514830 PCDH11XQ9BZA7 1347 aa15.82■□□□□ 0.12
PDLIM5-220ENST00000514830 PCDH11YQ9BZA8 1340 aa15.82■□□□□ 0.12
PDLIM5-220ENST00000514830 HTATSF1O43719 755 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-220ENST00000514830 TMPOP42166 694 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-220ENST00000514830 FAM98CQ17RN3 349 aaKnown RBP15.81■□□□□ 0.12
PDLIM5-220ENST00000514830 CCDC27Q2M243 656 aa15.81■□□□□ 0.12
PDLIM5-220ENST00000514830 BCL9O00512 1426 aa15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 EXOC5O00471 708 aa15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 APAF1O14727 1248 aa15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 NKX1-1Q15270 411 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 DDB1Q16531 1140 aa15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 AKAP4Q5JQC9 854 aa15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 SIPA1L3O60292 1781 aaPredicted RBP15.8■□□□□ 0.12
PDLIM5-220ENST00000514830 MAP3K5Q99683 1374 aa15.79■□□□□ 0.12
PDLIM5-220ENST00000514830 IFNL2Q8IZJ0 200 aa15.79■□□□□ 0.12
PDLIM5-220ENST00000514830 CYP27B1O15528 508 aa15.78■□□□□ 0.12
PDLIM5-220ENST00000514830 PHKG2P15735 406 aa15.78■□□□□ 0.12
PDLIM5-220ENST00000514830 LMOD3Q0VAK6 560 aa15.78■□□□□ 0.12
PDLIM5-220ENST00000514830 ZNF530Q6P9A1 599 aaPredicted RBP15.78■□□□□ 0.12
PDLIM5-220ENST00000514830 GNAT3A8MTJ3 354 aa15.77■□□□□ 0.12
PDLIM5-220ENST00000514830 HSP90AB1P08238 724 aaKnown RBP15.77■□□□□ 0.12
PDLIM5-220ENST00000514830 SBF2Q86WG5 1849 aa15.77■□□□□ 0.11
PDLIM5-220ENST00000514830 MRC1P22897 1456 aa15.77■□□□□ 0.11
PDLIM5-220ENST00000514830 TOGARAM1Q9Y4F4 1720 aa15.77■□□□□ 0.11
PDLIM5-220ENST00000514830 CEMIPQ8WUJ3 1361 aa15.76■□□□□ 0.11
PDLIM5-220ENST00000514830 ITGB4P16144 1822 aa15.76■□□□□ 0.11
PDLIM5-220ENST00000514830 RIPK4P57078 832 aa15.76■□□□□ 0.11
PDLIM5-220ENST00000514830 C1orf141Q5JVX7 400 aa15.76■□□□□ 0.11
PDLIM5-220ENST00000514830 SEPT12Q8IYM1 358 aa15.76■□□□□ 0.11
PDLIM5-220ENST00000514830 ZNF521Q96K83 1311 aa15.75■□□□□ 0.11
PDLIM5-220ENST00000514830 DCAF5Q96JK2 942 aa15.75■□□□□ 0.11
PDLIM5-220ENST00000514830 TRIM35Q9UPQ4 493 aa15.75■□□□□ 0.11
PDLIM5-220ENST00000514830 KDM6AO15550 1401 aaPredicted RBP15.75■□□□□ 0.11
PDLIM5-220ENST00000514830 DOT1LQ8TEK3 1739 aa15.74■□□□□ 0.11
PDLIM5-220ENST00000514830 ZBED9Q6R2W3 1325 aa15.73■□□□□ 0.11
PDLIM5-220ENST00000514830 MARCH10Q8NA82 808 aaPredicted RBP15.73■□□□□ 0.11
PDLIM5-220ENST00000514830 NHSQ6T4R5 1651 aa15.73■□□□□ 0.11
PDLIM5-220ENST00000514830 IL16Q14005 1332 aa15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 HNRNPUQ00839 825 aaKnown RBP eCLIP15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 PDE3BQ13370 1112 aa15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 WDR63Q8IWG1 891 aa15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 WWC1Q8IX03 1113 aa15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 RTF1Q92541 710 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 RRP7AQ9Y3A4 280 aaKnown RBP15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 SRCAPQ6ZRS2 3230 aa15.72■□□□□ 0.11
PDLIM5-220ENST00000514830 ERVV-2B6SEH9 535 aa15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 RNMTO43148 476 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 MSH5O43196 834 aa15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 CALD1Q05682 793 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 IL17REQ8NFR9 667 aa15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 DDX54Q8TDD1 881 aaKnown RBP15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 KDM3BQ7LBC6 1761 aa15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 PAPPAQ13219 1627 aa15.71■□□□□ 0.11
PDLIM5-220ENST00000514830 NEUROD2Q15784 382 aa15.7■□□□□ 0.1
PDLIM5-220ENST00000514830 KRT27Q7Z3Y8 459 aa15.7■□□□□ 0.1
PDLIM5-220ENST00000514830 BABAM1Q9NWV8 329 aa15.7■□□□□ 0.1
PDLIM5-220ENST00000514830 A0A0G2JS52 829 aa15.69■□□□□ 0.1
PDLIM5-220ENST00000514830 MYT1Q01538 1121 aa15.69■□□□□ 0.1
PDLIM5-220ENST00000514830 MPRIPQ6WCQ1 1025 aa15.69■□□□□ 0.1
PDLIM5-220ENST00000514830 UBR2Q8IWV8 1755 aa15.68■□□□□ 0.1
PDLIM5-220ENST00000514830 MCM10Q7L590 875 aa15.68■□□□□ 0.1
PDLIM5-220ENST00000514830 LGR6Q9HBX8 967 aa15.68■□□□□ 0.1
PDLIM5-220ENST00000514830 ZNF853P0CG23 659 aa15.67■□□□□ 0.1
PDLIM5-220ENST00000514830 BAG6P46379 1132 aa15.67■□□□□ 0.1
PDLIM5-220ENST00000514830 SLC52A2Q9HAB3 445 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms