RNA–Protein interactions for RNA: ENST00000514627.5

YIPF3-217, Transcript of Yip1 domain family member 3, humanhuman

TSL 3

Gene YIPF3, Length 854 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-217ENST00000514627 FLT4P35916 1363 aa17.39■□□□□ 0.37
YIPF3-217ENST00000514627 SYTL4Q96C24 671 aaPredicted RBP17.38■□□□□ 0.37
YIPF3-217ENST00000514627 TATP17735 454 aaPredicted RBP17.37■□□□□ 0.37
YIPF3-217ENST00000514627 HSP90AB2PQ58FF8 381 aa17.37■□□□□ 0.37
YIPF3-217ENST00000514627 SLC16A10Q8TF71 515 aa17.37■□□□□ 0.37
YIPF3-217ENST00000514627 SGIP1Q9BQI5 828 aa17.37■□□□□ 0.37
YIPF3-217ENST00000514627 MEGF6O75095 1541 aa17.37■□□□□ 0.37
YIPF3-217ENST00000514627 AKT1S1Q96B36 256 aa17.36■□□□□ 0.37
YIPF3-217ENST00000514627 BTAF1O14981 1849 aa17.35■□□□□ 0.37
YIPF3-217ENST00000514627 YY1P25490 414 aa17.35■□□□□ 0.37
YIPF3-217ENST00000514627 HMGB2P26583 209 aaKnown RBP17.35■□□□□ 0.37
YIPF3-217ENST00000514627 ZNF827Q17R98 1081 aa17.35■□□□□ 0.37
YIPF3-217ENST00000514627 PAPPAQ13219 1627 aa17.34■□□□□ 0.37
YIPF3-217ENST00000514627 USHBP1Q8N6Y0 703 aa17.34■□□□□ 0.37
YIPF3-217ENST00000514627 SYT17Q9BSW7 474 aa17.34■□□□□ 0.37
YIPF3-217ENST00000514627 NSD3Q9BZ95 1437 aa17.34■□□□□ 0.37
YIPF3-217ENST00000514627 ARXQ96QS3 562 aa17.33■□□□□ 0.36
YIPF3-217ENST00000514627 FHDC1Q9C0D6 1143 aaPredicted RBP17.33■□□□□ 0.36
YIPF3-217ENST00000514627 KAT6BQ8WYB5 2073 aa17.32■□□□□ 0.36
YIPF3-217ENST00000514627 NSD2O96028 1365 aa17.32■□□□□ 0.36
YIPF3-217ENST00000514627 PCDH11XQ9BZA7 1347 aa17.32■□□□□ 0.36
YIPF3-217ENST00000514627 PCDH11YQ9BZA8 1340 aa17.32■□□□□ 0.36
YIPF3-217ENST00000514627 TFCP2L1Q9NZI6 479 aa17.32■□□□□ 0.36
YIPF3-217ENST00000514627 WASHC2AQ641Q2 1341 aa17.31■□□□□ 0.36
YIPF3-217ENST00000514627 CCNL1Q9UK58 526 aaPredicted RBP17.31■□□□□ 0.36
YIPF3-217ENST00000514627 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
YIPF3-217ENST00000514627 MAP3K5Q99683 1374 aa17.3■□□□□ 0.36
YIPF3-217ENST00000514627 PNPLA7Q6ZV29 1317 aa17.29■□□□□ 0.36
YIPF3-217ENST00000514627 POLD1P28340 1107 aa17.29■□□□□ 0.36
YIPF3-217ENST00000514627 EIF4G2P78344 907 aaKnown RBP eCLIP17.29■□□□□ 0.36
YIPF3-217ENST00000514627 PPM1GO15355 546 aaPredicted RBP17.28■□□□□ 0.36
YIPF3-217ENST00000514627 CYP27B1O15528 508 aa17.28■□□□□ 0.36
YIPF3-217ENST00000514627 KCNQ4P56696 695 aa17.28■□□□□ 0.36
YIPF3-217ENST00000514627 MYOM1P52179 1685 aa17.28■□□□□ 0.36
YIPF3-217ENST00000514627 KIF20BQ96Q89 1820 aa17.28■□□□□ 0.36
YIPF3-217ENST00000514627 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.27■□□□□ 0.36
YIPF3-217ENST00000514627 SPG7Q9UQ90 795 aa17.27■□□□□ 0.36
YIPF3-217ENST00000514627 RGPD2P0DJD1 1756 aa17.27■□□□□ 0.35
YIPF3-217ENST00000514627 NKX1-1Q15270 411 aaPredicted RBP17.26■□□□□ 0.35
YIPF3-217ENST00000514627 POLKQ9UBT6 870 aa17.26■□□□□ 0.35
YIPF3-217ENST00000514627 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
YIPF3-217ENST00000514627 DOT1LQ8TEK3 1739 aa17.25■□□□□ 0.35
YIPF3-217ENST00000514627 SHANK3Q9BYB0 1731 aa17.25■□□□□ 0.35
YIPF3-217ENST00000514627 MPRIPQ6WCQ1 1025 aa17.25■□□□□ 0.35
YIPF3-217ENST00000514627 SMARCC1Q92922 1105 aaPredicted RBP17.25■□□□□ 0.35
YIPF3-217ENST00000514627 POLR3GLQ9BT43 218 aa17.25■□□□□ 0.35
YIPF3-217ENST00000514627 FLAD1Q8NFF5 587 aa17.24■□□□□ 0.35
YIPF3-217ENST00000514627 EYA1Q99502 592 aa17.24■□□□□ 0.35
YIPF3-217ENST00000514627 HSPA5P11021 654 aaKnown RBP17.23■□□□□ 0.35
YIPF3-217ENST00000514627 CCER1Q8TC90 406 aaPredicted RBP17.23■□□□□ 0.35
YIPF3-217ENST00000514627 LY75O60449 1722 aa17.23■□□□□ 0.35
YIPF3-217ENST00000514627 QSER1Q2KHR3 1735 aa17.22■□□□□ 0.35
YIPF3-217ENST00000514627 PALLDQ8WX93 1383 aa17.22■□□□□ 0.35
YIPF3-217ENST00000514627 PLEKHG2Q9H7P9 1386 aa17.22■□□□□ 0.35
YIPF3-217ENST00000514627 COL23A1Q86Y22 540 aaPredicted RBP17.21■□□□□ 0.35
YIPF3-217ENST00000514627 PANK3Q9H999 370 aa17.21■□□□□ 0.35
YIPF3-217ENST00000514627 MSH5O43196 834 aa17.2■□□□□ 0.34
YIPF3-217ENST00000514627 IFNL2Q8IZJ0 200 aa17.2■□□□□ 0.34
YIPF3-217ENST00000514627 PIGBQ92521 554 aa17.2■□□□□ 0.34
YIPF3-217ENST00000514627 EIF4A2Q14240 407 aaKnown RBP17.19■□□□□ 0.34
YIPF3-217ENST00000514627 ANKRD26Q9UPS8 1709 aa17.18■□□□□ 0.34
YIPF3-217ENST00000514627 TNNT2P45379 298 aaPredicted RBP17.18■□□□□ 0.34
YIPF3-217ENST00000514627 UTRNP46939 3433 aa17.18■□□□□ 0.34
YIPF3-217ENST00000514627 PHKG2P15735 406 aa17.17■□□□□ 0.34
YIPF3-217ENST00000514627 GPR162Q16538 588 aa17.17■□□□□ 0.34
YIPF3-217ENST00000514627 KLHL34Q8N239 644 aa17.17■□□□□ 0.34
YIPF3-217ENST00000514627 TMOD3Q9NYL9 352 aa17.17■□□□□ 0.34
YIPF3-217ENST00000514627 COL24A1Q17RW2 1714 aa17.16■□□□□ 0.34
YIPF3-217ENST00000514627 PKD1L3Q7Z443 1732 aa17.16■□□□□ 0.34
YIPF3-217ENST00000514627 IGSF1Q8N6C5 1336 aa17.16■□□□□ 0.34
YIPF3-217ENST00000514627 LOC102724428A0A0B4J2F2 783 aa17.15■□□□□ 0.34
YIPF3-217ENST00000514627 SIK1P57059 783 aa17.15■□□□□ 0.34
YIPF3-217ENST00000514627 AK7Q96M32 723 aa17.15■□□□□ 0.34
YIPF3-217ENST00000514627 HSP90AB1P08238 724 aaKnown RBP17.14■□□□□ 0.33
YIPF3-217ENST00000514627 MORC1Q86VD1 984 aa17.14■□□□□ 0.33
YIPF3-217ENST00000514627 ZNF784Q8NCA9 323 aaPredicted RBP17.14■□□□□ 0.33
YIPF3-217ENST00000514627 KNSTRNQ9Y448 316 aa17.14■□□□□ 0.33
YIPF3-217ENST00000514627 MAP2P11137 1827 aaKnown RBP17.14■□□□□ 0.33
YIPF3-217ENST00000514627 PLEKHO1Q53GL0 409 aaPredicted RBP17.13■□□□□ 0.33
YIPF3-217ENST00000514627 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 SSFA2P28290 1259 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 NLGN2Q8NFZ4 835 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 DCAF5Q96JK2 942 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 ASAP1Q9ULH1 1129 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 CD2APQ9Y5K6 639 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 TUBGCP6Q96RT7 1819 aa17.12■□□□□ 0.33
YIPF3-217ENST00000514627 GRIN3BO60391 1043 aa17.11■□□□□ 0.33
YIPF3-217ENST00000514627 MSL1Q68DK7 614 aa17.11■□□□□ 0.33
YIPF3-217ENST00000514627 C5P01031 1676 aa17.1■□□□□ 0.33
YIPF3-217ENST00000514627 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
YIPF3-217ENST00000514627 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.1■□□□□ 0.33
YIPF3-217ENST00000514627 ATG3Q9NT62 314 aa17.1■□□□□ 0.33
YIPF3-217ENST00000514627 ATP6V1AP38606 617 aa17.09■□□□□ 0.33
YIPF3-217ENST00000514627 PELP1Q8IZL8 1130 aaKnown RBP17.09■□□□□ 0.33
YIPF3-217ENST00000514627 LINC00116Q8NCU8 138 aa17.09■□□□□ 0.33
YIPF3-217ENST00000514627 ITGB4P16144 1822 aa17.08■□□□□ 0.33
YIPF3-217ENST00000514627 C4BP0C0L5 1744 aa17.08■□□□□ 0.32
YIPF3-217ENST00000514627 ITPK1Q13572 414 aa17.08■□□□□ 0.32
YIPF3-217ENST00000514627 GOLGB1Q14789 3259 aaKnown RBP17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 563.5 ms