RNA–Protein interactions for RNA: ENST00000514348.1

TMEM173-213, Transcript of transmembrane protein 173, humanhuman

TSL 3

Gene TMEM173, Length 705 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM173-213ENST00000514348 NBPF4Q96M43 638 aa17.45■□□□□ 0.38
TMEM173-213ENST00000514348 NHSQ6T4R5 1651 aa17.45■□□□□ 0.38
TMEM173-213ENST00000514348 NPC1L1Q9UHC9 1359 aa17.44■□□□□ 0.38
TMEM173-213ENST00000514348 PARD3Q8TEW0 1356 aa17.43■□□□□ 0.38
TMEM173-213ENST00000514348 SHANK3Q9BYB0 1731 aa17.43■□□□□ 0.38
TMEM173-213ENST00000514348 BTAF1O14981 1849 aa17.42■□□□□ 0.38
TMEM173-213ENST00000514348 RAPGEF4Q8WZA2 1011 aa17.42■□□□□ 0.38
TMEM173-213ENST00000514348 DDX10Q13206 875 aaKnown RBP17.41■□□□□ 0.38
TMEM173-213ENST00000514348 EIF4A2Q14240 407 aaKnown RBP17.41■□□□□ 0.38
TMEM173-213ENST00000514348 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
TMEM173-213ENST00000514348 MTHFSP49914 203 aa17.4■□□□□ 0.38
TMEM173-213ENST00000514348 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
TMEM173-213ENST00000514348 DOT1LQ8TEK3 1739 aa17.39■□□□□ 0.37
TMEM173-213ENST00000514348 EYA1Q99502 592 aa17.39■□□□□ 0.37
TMEM173-213ENST00000514348 BCL9O00512 1426 aa17.38■□□□□ 0.37
TMEM173-213ENST00000514348 KCNQ2O43526 872 aa17.38■□□□□ 0.37
TMEM173-213ENST00000514348 DDX54Q8TDD1 881 aaKnown RBP17.38■□□□□ 0.37
TMEM173-213ENST00000514348 BCL11BQ9C0K0 894 aaPredicted RBP17.38■□□□□ 0.37
TMEM173-213ENST00000514348 ANO8Q9HCE9 1232 aaPredicted RBP17.38■□□□□ 0.37
TMEM173-213ENST00000514348 MEGF6O75095 1541 aa17.37■□□□□ 0.37
TMEM173-213ENST00000514348 ZCRB1Q8TBF4 217 aaKnown RBP17.37■□□□□ 0.37
TMEM173-213ENST00000514348 CASZ1Q86V15 1759 aa17.36■□□□□ 0.37
TMEM173-213ENST00000514348 PLSCR1O15162 318 aa17.34■□□□□ 0.37
TMEM173-213ENST00000514348 NBPF14Q5TI25 921 aa17.34■□□□□ 0.37
TMEM173-213ENST00000514348 PROM2Q8N271 834 aa17.34■□□□□ 0.37
TMEM173-213ENST00000514348 IGSF1Q8N6C5 1336 aa17.32■□□□□ 0.36
TMEM173-213ENST00000514348 IL13P35225 146 aa17.32■□□□□ 0.36
TMEM173-213ENST00000514348 CFAP53Q96M91 514 aa17.32■□□□□ 0.36
TMEM173-213ENST00000514348 NCAPD2Q15021 1401 aa17.31■□□□□ 0.36
TMEM173-213ENST00000514348 ZNF316A6NFI3 1004 aaPredicted RBP17.31■□□□□ 0.36
TMEM173-213ENST00000514348 DIAPH1O60610 1272 aaKnown RBP17.31■□□□□ 0.36
TMEM173-213ENST00000514348 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
TMEM173-213ENST00000514348 PCDH11XQ9BZA7 1347 aa17.3■□□□□ 0.36
TMEM173-213ENST00000514348 PCDH11YQ9BZA8 1340 aa17.3■□□□□ 0.36
TMEM173-213ENST00000514348 PPP2R1AP30153 589 aa17.3■□□□□ 0.36
TMEM173-213ENST00000514348 TXNRD1Q16881 649 aa17.3■□□□□ 0.36
TMEM173-213ENST00000514348 SULT6B1Q6IMI4 303 aa17.3■□□□□ 0.36
TMEM173-213ENST00000514348 PDGFDQ9GZP0 370 aaPredicted RBP17.3■□□□□ 0.36
TMEM173-213ENST00000514348 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
TMEM173-213ENST00000514348 TUBGCP6Q96RT7 1819 aa17.29■□□□□ 0.36
TMEM173-213ENST00000514348 U2SURPO15042 1029 aaKnown RBP17.28■□□□□ 0.36
TMEM173-213ENST00000514348 AEBP1Q8IUX7 1158 aa17.28■□□□□ 0.36
TMEM173-213ENST00000514348 HMOX1P09601 288 aa17.27■□□□□ 0.36
TMEM173-213ENST00000514348 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.36
TMEM173-213ENST00000514348 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.35
TMEM173-213ENST00000514348 PLEKHO1Q53GL0 409 aaPredicted RBP17.26■□□□□ 0.35
TMEM173-213ENST00000514348 LY75O60449 1722 aa17.26■□□□□ 0.35
TMEM173-213ENST00000514348 PKD1L3Q7Z443 1732 aa17.26■□□□□ 0.35
TMEM173-213ENST00000514348 RALBP1Q15311 655 aa17.25■□□□□ 0.35
TMEM173-213ENST00000514348 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.35
TMEM173-213ENST00000514348 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
TMEM173-213ENST00000514348 ITGB4P16144 1822 aa17.25■□□□□ 0.35
TMEM173-213ENST00000514348 COL3A1P02461 1466 aaPredicted RBP17.24■□□□□ 0.35
TMEM173-213ENST00000514348 CYP27B1O15528 508 aa17.24■□□□□ 0.35
TMEM173-213ENST00000514348 PRIM1P49642 420 aaKnown RBP17.24■□□□□ 0.35
TMEM173-213ENST00000514348 AMOTQ4VCS5 1084 aa17.23■□□□□ 0.35
TMEM173-213ENST00000514348 ZNF530Q6P9A1 599 aaPredicted RBP17.23■□□□□ 0.35
TMEM173-213ENST00000514348 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
TMEM173-213ENST00000514348 STK32BQ9NY57 414 aa17.23■□□□□ 0.35
TMEM173-213ENST00000514348 ZBTB7AO95365 584 aa17.22■□□□□ 0.35
TMEM173-213ENST00000514348 KCNQ4P56696 695 aa17.22■□□□□ 0.35
TMEM173-213ENST00000514348 SPON1Q9HCB6 807 aa17.22■□□□□ 0.35
TMEM173-213ENST00000514348 LRRC4BQ9NT99 713 aa17.22■□□□□ 0.35
TMEM173-213ENST00000514348 KDRP35968 1356 aa17.22■□□□□ 0.35
TMEM173-213ENST00000514348 PLEKHG2Q9H7P9 1386 aa17.21■□□□□ 0.35
TMEM173-213ENST00000514348 PHKG2P15735 406 aa17.21■□□□□ 0.35
TMEM173-213ENST00000514348 SLC15A2Q16348 729 aa17.21■□□□□ 0.35
TMEM173-213ENST00000514348 ZNF827Q17R98 1081 aa17.21■□□□□ 0.35
TMEM173-213ENST00000514348 C1orf141Q5JVX7 400 aa17.21■□□□□ 0.35
TMEM173-213ENST00000514348 U2AF1L5P0DN76 240 aaPredicted RBP17.2■□□□□ 0.34
TMEM173-213ENST00000514348 U2AF1Q01081 240 aaKnown RBP eCLIP17.2■□□□□ 0.34
TMEM173-213ENST00000514348 QSER1Q2KHR3 1735 aa17.2■□□□□ 0.34
TMEM173-213ENST00000514348 HSP90AB1P08238 724 aaKnown RBP17.19■□□□□ 0.34
TMEM173-213ENST00000514348 PPP1R1BQ9UD71 204 aaPredicted RBP17.19■□□□□ 0.34
TMEM173-213ENST00000514348 ATF5Q9Y2D1 282 aaPredicted RBP17.19■□□□□ 0.34
TMEM173-213ENST00000514348 TAF1LQ8IZX4 1826 aa17.19■□□□□ 0.34
TMEM173-213ENST00000514348 MYBBP1AQ9BQG0 1328 aaKnown RBP17.19■□□□□ 0.34
TMEM173-213ENST00000514348 NKX1-1Q15270 411 aaPredicted RBP17.18■□□□□ 0.34
TMEM173-213ENST00000514348 MPRIPQ6WCQ1 1025 aa17.18■□□□□ 0.34
TMEM173-213ENST00000514348 C5P01031 1676 aa17.17■□□□□ 0.34
TMEM173-213ENST00000514348 PRKAR2BP31323 418 aa17.15■□□□□ 0.34
TMEM173-213ENST00000514348 PTGER2P43116 358 aa17.15■□□□□ 0.34
TMEM173-213ENST00000514348 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
TMEM173-213ENST00000514348 PRKRIP1Q9H875 184 aaPredicted RBP17.15■□□□□ 0.34
TMEM173-213ENST00000514348 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
TMEM173-213ENST00000514348 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
TMEM173-213ENST00000514348 AKAP4Q5JQC9 854 aa17.14■□□□□ 0.33
TMEM173-213ENST00000514348 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
TMEM173-213ENST00000514348 RSPH6AQ9H0K4 717 aa17.13■□□□□ 0.33
TMEM173-213ENST00000514348 NEFMP07197 916 aa17.12■□□□□ 0.33
TMEM173-213ENST00000514348 CABP4P57796 275 aa17.12■□□□□ 0.33
TMEM173-213ENST00000514348 GAS2L2Q8NHY3 880 aa17.12■□□□□ 0.33
TMEM173-213ENST00000514348 PIGBQ92521 554 aa17.12■□□□□ 0.33
TMEM173-213ENST00000514348 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
TMEM173-213ENST00000514348 FCHSD2O94868 740 aa17.11■□□□□ 0.33
TMEM173-213ENST00000514348 SLC27A3Q5K4L6 730 aa17.11■□□□□ 0.33
TMEM173-213ENST00000514348 SMARCC1Q92922 1105 aaPredicted RBP17.11■□□□□ 0.33
TMEM173-213ENST00000514348 KDM6AO15550 1401 aaPredicted RBP17.11■□□□□ 0.33
TMEM173-213ENST00000514348 COL24A1Q17RW2 1714 aa17.1■□□□□ 0.33
TMEM173-213ENST00000514348 ANP32CO43423 234 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms