RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 SYTL4Q96C24 671 aaPredicted RBP17.58■□□□□ 0.4
SFXN1-210ENST00000513725 LY75O60449 1722 aa17.58■□□□□ 0.4
SFXN1-210ENST00000513725 KCNH5Q8NCM2 988 aa17.57■□□□□ 0.4
SFXN1-210ENST00000513725 HMGB2P26583 209 aaKnown RBP17.56■□□□□ 0.4
SFXN1-210ENST00000513725 RRAGCQ9HB90 399 aa17.56■□□□□ 0.4
SFXN1-210ENST00000513725 NLRP2Q9NX02 1062 aa17.54■□□□□ 0.4
SFXN1-210ENST00000513725 BCS1LQ9Y276 419 aa17.54■□□□□ 0.4
SFXN1-210ENST00000513725 KCPQ6ZWJ8 1503 aa17.53■□□□□ 0.4
SFXN1-210ENST00000513725 FOXN1O15353 648 aa17.53■□□□□ 0.4
SFXN1-210ENST00000513725 PRIM1P49642 420 aaKnown RBP17.53■□□□□ 0.4
SFXN1-210ENST00000513725 C9orf131Q5VYM1 1079 aa17.53■□□□□ 0.4
SFXN1-210ENST00000513725 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
SFXN1-210ENST00000513725 SOX12O15370 315 aa17.52■□□□□ 0.4
SFXN1-210ENST00000513725 DDX54Q8TDD1 881 aaKnown RBP17.52■□□□□ 0.4
SFXN1-210ENST00000513725 ANKRD36BQ8N2N9 1353 aa17.52■□□□□ 0.39
SFXN1-210ENST00000513725 PXDNLA1KZ92 1463 aa17.51■□□□□ 0.39
SFXN1-210ENST00000513725 KIAA1210Q9ULL0 1709 aa17.51■□□□□ 0.39
SFXN1-210ENST00000513725 TNRC6CQ9HCJ0 1690 aaKnown RBP17.51■□□□□ 0.39
SFXN1-210ENST00000513725 CTCFP49711 727 aaPredicted RBP17.5■□□□□ 0.39
SFXN1-210ENST00000513725 RGS19P49795 217 aa17.49■□□□□ 0.39
SFXN1-210ENST00000513725 AIDAQ96BJ3 306 aa17.49■□□□□ 0.39
SFXN1-210ENST00000513725 MPHOSPH9Q99550 1183 aa17.49■□□□□ 0.39
SFXN1-210ENST00000513725 USP47Q96K76 1375 aa17.49■□□□□ 0.39
SFXN1-210ENST00000513725 SRPK2P78362 688 aaKnown RBP17.48■□□□□ 0.39
SFXN1-210ENST00000513725 TGFB2P61812 414 aa17.47■□□□□ 0.39
SFXN1-210ENST00000513725 NSD2O96028 1365 aa17.47■□□□□ 0.39
SFXN1-210ENST00000513725 ERBB3P21860 1342 aa17.47■□□□□ 0.39
SFXN1-210ENST00000513725 C5P01031 1676 aa17.46■□□□□ 0.39
SFXN1-210ENST00000513725 USP54Q70EL1 1684 aa17.46■□□□□ 0.39
SFXN1-210ENST00000513725 PKD1L3Q7Z443 1732 aa17.46■□□□□ 0.39
SFXN1-210ENST00000513725 FCHSD2O94868 740 aa17.45■□□□□ 0.38
SFXN1-210ENST00000513725 DOT1LQ8TEK3 1739 aa17.44■□□□□ 0.38
SFXN1-210ENST00000513725 RNF181Q9P0P0 153 aa17.44■□□□□ 0.38
SFXN1-210ENST00000513725 MKRN1Q9UHC7 482 aaKnown RBP17.44■□□□□ 0.38
SFXN1-210ENST00000513725 A0A0G2JLW4 131 aa17.43■□□□□ 0.38
SFXN1-210ENST00000513725 CCDC85CA6NKD9 419 aa17.43■□□□□ 0.38
SFXN1-210ENST00000513725 AK7Q96M32 723 aa17.43■□□□□ 0.38
SFXN1-210ENST00000513725 CABP1Q9NZU7 370 aa17.42■□□□□ 0.38
SFXN1-210ENST00000513725 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
SFXN1-210ENST00000513725 NFAT5O94916 1531 aa17.42■□□□□ 0.38
SFXN1-210ENST00000513725 N4BP2Q86UW6 1770 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-210ENST00000513725 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
SFXN1-210ENST00000513725 PHF14O94880 888 aa17.41■□□□□ 0.38
SFXN1-210ENST00000513725 VEGFAP15692 232 aaPredicted RBP17.41■□□□□ 0.38
SFXN1-210ENST00000513725 LBX1P52954 281 aa17.41■□□□□ 0.38
SFXN1-210ENST00000513725 CABP2Q9NPB3 220 aa17.41■□□□□ 0.38
SFXN1-210ENST00000513725 CREBZFQ9NS37 354 aa17.41■□□□□ 0.38
SFXN1-210ENST00000513725 KDM2AQ9Y2K7 1162 aa17.41■□□□□ 0.38
SFXN1-210ENST00000513725 KIF13BQ9NQT8 1826 aa17.4■□□□□ 0.38
SFXN1-210ENST00000513725 KIAA1551Q9HCM1 1747 aa17.39■□□□□ 0.37
SFXN1-210ENST00000513725 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.39■□□□□ 0.37
SFXN1-210ENST00000513725 ANKRD24Q8TF21 1146 aa17.39■□□□□ 0.37
SFXN1-210ENST00000513725 SMIM5Q71RC9 77 aa17.37■□□□□ 0.37
SFXN1-210ENST00000513725 TTC21BQ7Z4L5 1316 aa17.37■□□□□ 0.37
SFXN1-210ENST00000513725 TAF1LQ8IZX4 1826 aa17.37■□□□□ 0.37
SFXN1-210ENST00000513725 C4BP0C0L5 1744 aa17.36■□□□□ 0.37
SFXN1-210ENST00000513725 MMP10P09238 476 aa17.36■□□□□ 0.37
SFXN1-210ENST00000513725 DPEP1P16444 411 aa17.36■□□□□ 0.37
SFXN1-210ENST00000513725 SSFA2P28290 1259 aa17.36■□□□□ 0.37
SFXN1-210ENST00000513725 DCAF11Q8TEB1 546 aa17.36■□□□□ 0.37
SFXN1-210ENST00000513725 STAC3Q96MF2 364 aa17.36■□□□□ 0.37
SFXN1-210ENST00000513725 AMIGO3Q86WK7 504 aa17.35■□□□□ 0.37
SFXN1-210ENST00000513725 TTC21AQ8NDW8 1320 aa17.35■□□□□ 0.37
SFXN1-210ENST00000513725 ZC3H4Q9UPT8 1303 aaKnown RBP17.35■□□□□ 0.37
SFXN1-210ENST00000513725 CNTNAP1P78357 1384 aa17.34■□□□□ 0.37
SFXN1-210ENST00000513725 ZNF692Q9BU19 519 aaPredicted RBP17.34■□□□□ 0.37
SFXN1-210ENST00000513725 ARFGEF1Q9Y6D6 1849 aa17.34■□□□□ 0.37
SFXN1-210ENST00000513725 UBR3Q6ZT12 1888 aa17.33■□□□□ 0.37
SFXN1-210ENST00000513725 TOGARAM1Q9Y4F4 1720 aa17.33■□□□□ 0.37
SFXN1-210ENST00000513725 PALLDQ8WX93 1383 aa17.33■□□□□ 0.36
SFXN1-210ENST00000513725 WBP1LQ9NX94 342 aa17.33■□□□□ 0.36
SFXN1-210ENST00000513725 GLTPD2A6NH11 291 aa17.32■□□□□ 0.36
SFXN1-210ENST00000513725 ZCRB1Q8TBF4 217 aaKnown RBP17.32■□□□□ 0.36
SFXN1-210ENST00000513725 DCAF5Q96JK2 942 aa17.32■□□□□ 0.36
SFXN1-210ENST00000513725 CCDC87Q9NVE4 849 aa17.32■□□□□ 0.36
SFXN1-210ENST00000513725 BRCA1P38398 1863 aaKnown RBP17.32■□□□□ 0.36
SFXN1-210ENST00000513725 PIM2Q9P1W9 311 aa17.31■□□□□ 0.36
SFXN1-210ENST00000513725 HSPA8P11142 646 aaKnown RBP17.3■□□□□ 0.36
SFXN1-210ENST00000513725 DALRD3Q5D0E6 543 aaKnown RBP17.3■□□□□ 0.36
SFXN1-210ENST00000513725 CFAP44Q96MT7 982 aa17.3■□□□□ 0.36
SFXN1-210ENST00000513725 PDE4DIPQ5VU43 2346 aa17.3■□□□□ 0.36
SFXN1-210ENST00000513725 TNRC18O15417 2968 aaPredicted RBP17.29■□□□□ 0.36
SFXN1-210ENST00000513725 SBF1O95248 1867 aa17.29■□□□□ 0.36
SFXN1-210ENST00000513725 KCNA3P22001 575 aa17.28■□□□□ 0.36
SFXN1-210ENST00000513725 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
SFXN1-210ENST00000513725 LTN1O94822 1766 aa17.28■□□□□ 0.36
SFXN1-210ENST00000513725 VEGFBP49765 207 aa17.27■□□□□ 0.36
SFXN1-210ENST00000513725 SMARCC1Q92922 1105 aaPredicted RBP17.27■□□□□ 0.36
SFXN1-210ENST00000513725 NLGN1Q8N2Q7 840 aa17.26■□□□□ 0.35
SFXN1-210ENST00000513725 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
SFXN1-210ENST00000513725 CHADLQ6NUI6 762 aa17.25■□□□□ 0.35
SFXN1-210ENST00000513725 FAM208AQ9UK61 1670 aaKnown RBP17.25■□□□□ 0.35
SFXN1-210ENST00000513725 GNPATO15228 680 aa17.24■□□□□ 0.35
SFXN1-210ENST00000513725 TMF1P82094 1093 aa17.24■□□□□ 0.35
SFXN1-210ENST00000513725 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
SFXN1-210ENST00000513725 MAP2K1Q02750 393 aaPredicted RBP17.23■□□□□ 0.35
SFXN1-210ENST00000513725 LTV1Q96GA3 475 aaPredicted RBP17.23■□□□□ 0.35
SFXN1-210ENST00000513725 PARP3Q9Y6F1 533 aa17.23■□□□□ 0.35
SFXN1-210ENST00000513725 VIRMAQ69YN4 1812 aaKnown RBP17.22■□□□□ 0.35
SFXN1-210ENST00000513725 LMNB1P20700 586 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms