RNA–Protein interactions for RNA: ENST00000513550.1

NEK11-214, Transcript of NIMA related kinase 11, humanhuman

TSL 3

Gene NEK11, Length 508 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK11-214ENST00000513550 TNS2Q63HR2 1409 aa17.4■□□□□ 0.38
NEK11-214ENST00000513550 KCNQ2O43526 872 aa17.4■□□□□ 0.38
NEK11-214ENST00000513550 TRIM37O94972 964 aa17.4■□□□□ 0.38
NEK11-214ENST00000513550 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
NEK11-214ENST00000513550 ZCRB1Q8TBF4 217 aaKnown RBP17.4■□□□□ 0.38
NEK11-214ENST00000513550 RAPGEF4Q8WZA2 1011 aa17.4■□□□□ 0.38
NEK11-214ENST00000513550 SHANK3Q9BYB0 1731 aa17.39■□□□□ 0.37
NEK11-214ENST00000513550 CYP27B1O15528 508 aa17.39■□□□□ 0.37
NEK11-214ENST00000513550 DEFB132Q7Z7B7 95 aa17.39■□□□□ 0.37
NEK11-214ENST00000513550 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
NEK11-214ENST00000513550 RALBP1Q15311 655 aa17.38■□□□□ 0.37
NEK11-214ENST00000513550 FAM196AQ6ZSG2 479 aa17.35■□□□□ 0.37
NEK11-214ENST00000513550 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
NEK11-214ENST00000513550 KDRP35968 1356 aa17.34■□□□□ 0.37
NEK11-214ENST00000513550 PHACTR3Q96KR7 559 aa17.34■□□□□ 0.37
NEK11-214ENST00000513550 CFAP53Q96M91 514 aa17.34■□□□□ 0.37
NEK11-214ENST00000513550 U2AF1L5P0DN76 240 aaPredicted RBP17.33■□□□□ 0.36
NEK11-214ENST00000513550 U2AF1Q01081 240 aaKnown RBP eCLIP17.33■□□□□ 0.36
NEK11-214ENST00000513550 EN1Q05925 392 aaPredicted RBP17.32■□□□□ 0.36
NEK11-214ENST00000513550 RSPH6AQ9H0K4 717 aa17.32■□□□□ 0.36
NEK11-214ENST00000513550 PRIM1P49642 420 aaKnown RBP17.31■□□□□ 0.36
NEK11-214ENST00000513550 MTHFSDQ2M296 383 aaKnown RBP17.31■□□□□ 0.36
NEK11-214ENST00000513550 PKD1L3Q7Z443 1732 aa17.3■□□□□ 0.36
NEK11-214ENST00000513550 SENP3-EIF4A1A0A087X0R7 540 aa17.3■□□□□ 0.36
NEK11-214ENST00000513550 APBA3O96018 575 aa17.3■□□□□ 0.36
NEK11-214ENST00000513550 PHKG2P15735 406 aa17.3■□□□□ 0.36
NEK11-214ENST00000513550 PRKAR2BP31323 418 aa17.3■□□□□ 0.36
NEK11-214ENST00000513550 ZNF530Q6P9A1 599 aaPredicted RBP17.3■□□□□ 0.36
NEK11-214ENST00000513550 TNS1Q9HBL0 1735 aaKnown RBP17.3■□□□□ 0.36
NEK11-214ENST00000513550 EZH2Q15910 746 aaKnown RBP17.29■□□□□ 0.36
NEK11-214ENST00000513550 SPG7Q9UQ90 795 aa17.29■□□□□ 0.36
NEK11-214ENST00000513550 SBF2Q86WG5 1849 aa17.28■□□□□ 0.36
NEK11-214ENST00000513550 PCDH11XQ9BZA7 1347 aa17.28■□□□□ 0.36
NEK11-214ENST00000513550 PCDH11YQ9BZA8 1340 aa17.28■□□□□ 0.36
NEK11-214ENST00000513550 PLEKHO1Q53GL0 409 aaPredicted RBP17.28■□□□□ 0.36
NEK11-214ENST00000513550 MPRIPQ6WCQ1 1025 aa17.28■□□□□ 0.36
NEK11-214ENST00000513550 SYTL4Q96C24 671 aaPredicted RBP17.28■□□□□ 0.36
NEK11-214ENST00000513550 TOGARAM1Q9Y4F4 1720 aa17.27■□□□□ 0.36
NEK11-214ENST00000513550 LGR6Q9HBX8 967 aa17.27■□□□□ 0.36
NEK11-214ENST00000513550 ANP32CO43423 234 aa17.26■□□□□ 0.35
NEK11-214ENST00000513550 KCNQ4P56696 695 aa17.26■□□□□ 0.35
NEK11-214ENST00000513550 CCDC146Q8IYE0 955 aa17.26■□□□□ 0.35
NEK11-214ENST00000513550 PROM2Q8N271 834 aa17.26■□□□□ 0.35
NEK11-214ENST00000513550 BCL11BQ9C0K0 894 aaPredicted RBP17.26■□□□□ 0.35
NEK11-214ENST00000513550 KDM6AO15550 1401 aaPredicted RBP17.26■□□□□ 0.35
NEK11-214ENST00000513550 DOT1LQ8TEK3 1739 aa17.26■□□□□ 0.35
NEK11-214ENST00000513550 BCL9O00512 1426 aa17.25■□□□□ 0.35
NEK11-214ENST00000513550 NKX1-1Q15270 411 aaPredicted RBP17.25■□□□□ 0.35
NEK11-214ENST00000513550 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
NEK11-214ENST00000513550 CAMKK2Q96RR4 588 aa17.25■□□□□ 0.35
NEK11-214ENST00000513550 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.25■□□□□ 0.35
NEK11-214ENST00000513550 NUDCQ9Y266 331 aa17.25■□□□□ 0.35
NEK11-214ENST00000513550 PLEKHF1Q96S99 279 aa17.24■□□□□ 0.35
NEK11-214ENST00000513550 ADAMTS8Q9UP79 889 aa17.24■□□□□ 0.35
NEK11-214ENST00000513550 PIGBQ92521 554 aa17.23■□□□□ 0.35
NEK11-214ENST00000513550 NHSQ6T4R5 1651 aa17.23■□□□□ 0.35
NEK11-214ENST00000513550 SF3B2Q13435 895 aaKnown RBP17.22■□□□□ 0.35
NEK11-214ENST00000513550 AMOTQ4VCS5 1084 aa17.22■□□□□ 0.35
NEK11-214ENST00000513550 FCHSD2O94868 740 aa17.21■□□□□ 0.35
NEK11-214ENST00000513550 DCTN1Q14203 1278 aa17.21■□□□□ 0.35
NEK11-214ENST00000513550 CCDC125Q86Z20 511 aa17.21■□□□□ 0.35
NEK11-214ENST00000513550 BTAF1O14981 1849 aa17.2■□□□□ 0.34
NEK11-214ENST00000513550 C1orf141Q5JVX7 400 aa17.2■□□□□ 0.34
NEK11-214ENST00000513550 IL17REQ8NFR9 667 aa17.2■□□□□ 0.34
NEK11-214ENST00000513550 RRP7AQ9Y3A4 280 aaKnown RBP17.2■□□□□ 0.34
NEK11-214ENST00000513550 KAT6BQ8WYB5 2073 aa17.19■□□□□ 0.34
NEK11-214ENST00000513550 BAG6P46379 1132 aa17.19■□□□□ 0.34
NEK11-214ENST00000513550 AKAP4Q5JQC9 854 aa17.19■□□□□ 0.34
NEK11-214ENST00000513550 ASAP1Q9ULH1 1129 aa17.19■□□□□ 0.34
NEK11-214ENST00000513550 RNMTO43148 476 aaKnown RBP17.18■□□□□ 0.34
NEK11-214ENST00000513550 MCM10Q7L590 875 aa17.18■□□□□ 0.34
NEK11-214ENST00000513550 NFATC2IPQ8NCF5 419 aa17.18■□□□□ 0.34
NEK11-214ENST00000513550 THUMPD2Q9BTF0 503 aaKnown RBP17.18■□□□□ 0.34
NEK11-214ENST00000513550 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
NEK11-214ENST00000513550 LRRC4BQ9NT99 713 aa17.18■□□□□ 0.34
NEK11-214ENST00000513550 PNISRQ8TF01 805 aaKnown RBP17.17■□□□□ 0.34
NEK11-214ENST00000513550 DCAF5Q96JK2 942 aa17.17■□□□□ 0.34
NEK11-214ENST00000513550 ITGB4P16144 1822 aa17.17■□□□□ 0.34
NEK11-214ENST00000513550 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
NEK11-214ENST00000513550 TXNRD1Q16881 649 aa17.16■□□□□ 0.34
NEK11-214ENST00000513550 DIEXFQ68CQ4 756 aaKnown RBP17.16■□□□□ 0.34
NEK11-214ENST00000513550 MIER1Q8N108 512 aa17.16■□□□□ 0.34
NEK11-214ENST00000513550 ATG3Q9NT62 314 aa17.16■□□□□ 0.34
NEK11-214ENST00000513550 PLSCR1O15162 318 aa17.15■□□□□ 0.34
NEK11-214ENST00000513550 CABP4P57796 275 aa17.15■□□□□ 0.34
NEK11-214ENST00000513550 SLC39A6Q13433 755 aa17.15■□□□□ 0.34
NEK11-214ENST00000513550 ANO8Q9HCE9 1232 aaPredicted RBP17.15■□□□□ 0.34
NEK11-214ENST00000513550 TMOD3Q9NYL9 352 aa17.15■□□□□ 0.34
NEK11-214ENST00000513550 MAP3K5Q99683 1374 aa17.15■□□□□ 0.34
NEK11-214ENST00000513550 PSDA5PKW4 1024 aaPredicted RBP17.14■□□□□ 0.33
NEK11-214ENST00000513550 GNAT3A8MTJ3 354 aa17.14■□□□□ 0.33
NEK11-214ENST00000513550 SMIM5Q71RC9 77 aa17.14■□□□□ 0.33
NEK11-214ENST00000513550 SLC4A9Q96Q91 983 aa17.14■□□□□ 0.33
NEK11-214ENST00000513550 KCNQ3O43525 872 aa17.13■□□□□ 0.33
NEK11-214ENST00000513550 NEUROD2Q15784 382 aa17.13■□□□□ 0.33
NEK11-214ENST00000513550 NFE2L2Q16236 605 aa17.13■□□□□ 0.33
NEK11-214ENST00000513550 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
NEK11-214ENST00000513550 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
NEK11-214ENST00000513550 HSP90AB1P08238 724 aaKnown RBP17.12■□□□□ 0.33
NEK11-214ENST00000513550 SLC52A2Q9HAB3 445 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms