RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
PTPN20-228ENST00000513266 NSD2O96028 1365 aa14.2□□□□□ -0.14
PTPN20-228ENST00000513266 KIF13BQ9NQT8 1826 aa14.2□□□□□ -0.14
PTPN20-228ENST00000513266 TOGARAM1Q9Y4F4 1720 aa14.19□□□□□ -0.14
PTPN20-228ENST00000513266 LTN1O94822 1766 aa14.19□□□□□ -0.14
PTPN20-228ENST00000513266 TNRC6CQ9HCJ0 1690 aaKnown RBP14.18□□□□□ -0.14
PTPN20-228ENST00000513266 C16orf71Q8IYS4 520 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-228ENST00000513266 CCNL1Q9UK58 526 aaPredicted RBP14.18□□□□□ -0.14
PTPN20-228ENST00000513266 BRCA1P38398 1863 aaKnown RBP14.18□□□□□ -0.14
PTPN20-228ENST00000513266 UBR3Q6ZT12 1888 aa14.17□□□□□ -0.14
PTPN20-228ENST00000513266 SOX12O15370 315 aa14.17□□□□□ -0.14
PTPN20-228ENST00000513266 FAM161AQ3B820 660 aa14.16□□□□□ -0.14
PTPN20-228ENST00000513266 ANKRD36BQ8N2N9 1353 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 PRIM1P49642 420 aaKnown RBP14.15□□□□□ -0.14
PTPN20-228ENST00000513266 KCNH5Q8NCM2 988 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 SYTL4Q96C24 671 aaPredicted RBP14.15□□□□□ -0.14
PTPN20-228ENST00000513266 NLRP2Q9NX02 1062 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 KDM2AQ9Y2K7 1162 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 KIAA1210Q9ULL0 1709 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 KCPQ6ZWJ8 1503 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 C10orf71Q711Q0 1435 aa14.15□□□□□ -0.14
PTPN20-228ENST00000513266 ERBB3P21860 1342 aa14.15□□□□□ -0.15
PTPN20-228ENST00000513266 ARFGEF1Q9Y6D6 1849 aa14.14□□□□□ -0.15
PTPN20-228ENST00000513266 SBF1O95248 1867 aa14.14□□□□□ -0.15
PTPN20-228ENST00000513266 SRPK2P78362 688 aaKnown RBP14.13□□□□□ -0.15
PTPN20-228ENST00000513266 DDX54Q8TDD1 881 aaKnown RBP14.13□□□□□ -0.15
PTPN20-228ENST00000513266 CABP2Q9NPB3 220 aa14.13□□□□□ -0.15
PTPN20-228ENST00000513266 C4BP0C0L5 1744 aa14.12□□□□□ -0.15
PTPN20-228ENST00000513266 PXDNLA1KZ92 1463 aa14.12□□□□□ -0.15
PTPN20-228ENST00000513266 CABP1Q9NZU7 370 aa14.12□□□□□ -0.15
PTPN20-228ENST00000513266 AMIGO3Q86WK7 504 aa14.11□□□□□ -0.15
PTPN20-228ENST00000513266 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
PTPN20-228ENST00000513266 PLEKHG2Q9H7P9 1386 aa14.1□□□□□ -0.15
PTPN20-228ENST00000513266 ARHGAP27Q6ZUM4 889 aa14.1□□□□□ -0.15
PTPN20-228ENST00000513266 SMC1BQ8NDV3 1235 aa14.1□□□□□ -0.15
PTPN20-228ENST00000513266 DCAF11Q8TEB1 546 aa14.1□□□□□ -0.15
PTPN20-228ENST00000513266 C9orf131Q5VYM1 1079 aa14.09□□□□□ -0.15
PTPN20-228ENST00000513266 SMIM5Q71RC9 77 aa14.09□□□□□ -0.15
PTPN20-228ENST00000513266 RRAGCQ9HB90 399 aa14.09□□□□□ -0.15
PTPN20-228ENST00000513266 BCS1LQ9Y276 419 aa14.09□□□□□ -0.15
PTPN20-228ENST00000513266 TTC21BQ7Z4L5 1316 aa14.09□□□□□ -0.15
PTPN20-228ENST00000513266 FAM208AQ9UK61 1670 aaKnown RBP14.08□□□□□ -0.16
PTPN20-228ENST00000513266 RGPD2P0DJD1 1756 aa14.08□□□□□ -0.16
PTPN20-228ENST00000513266 KDM2BQ8NHM5 1336 aa14.08□□□□□ -0.16
PTPN20-228ENST00000513266 USP47Q96K76 1375 aa14.08□□□□□ -0.16
PTPN20-228ENST00000513266 FOXN1O15353 648 aa14.06□□□□□ -0.16
PTPN20-228ENST00000513266 ANKRD24Q8TF21 1146 aa14.06□□□□□ -0.16
PTPN20-228ENST00000513266 PRDM10Q9NQV6 1147 aa14.06□□□□□ -0.16
PTPN20-228ENST00000513266 ITGB4P16144 1822 aa14.04□□□□□ -0.16
PTPN20-228ENST00000513266 A0A0G2JLW4 131 aa14.04□□□□□ -0.16
PTPN20-228ENST00000513266 TTC21AQ8NDW8 1320 aa14.04□□□□□ -0.16
PTPN20-228ENST00000513266 MON2Q7Z3U7 1717 aa14.04□□□□□ -0.16
PTPN20-228ENST00000513266 PDE4DIPQ5VU43 2346 aa14.03□□□□□ -0.16
PTPN20-228ENST00000513266 CCDC88AQ3V6T2 1871 aa14.02□□□□□ -0.16
PTPN20-228ENST00000513266 MAP2P11137 1827 aaKnown RBP14.02□□□□□ -0.16
PTPN20-228ENST00000513266 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.02□□□□□ -0.17
PTPN20-228ENST00000513266 PHF14O94880 888 aa14.02□□□□□ -0.17
PTPN20-228ENST00000513266 TGFB2P61812 414 aa14.02□□□□□ -0.17
PTPN20-228ENST00000513266 MLLT1Q03111 559 aaPredicted RBP14.02□□□□□ -0.17
PTPN20-228ENST00000513266 ABHD8Q96I13 439 aa14.02□□□□□ -0.17
PTPN20-228ENST00000513266 STAC3Q96MF2 364 aa14.02□□□□□ -0.17
PTPN20-228ENST00000513266 FCHSD2O94868 740 aa14.01□□□□□ -0.17
PTPN20-228ENST00000513266 AK7Q96M32 723 aa14.01□□□□□ -0.17
PTPN20-228ENST00000513266 VIRMAQ69YN4 1812 aaKnown RBP14.01□□□□□ -0.17
PTPN20-228ENST00000513266 PALLDQ8WX93 1383 aa14□□□□□ -0.17
PTPN20-228ENST00000513266 CENPJQ9HC77 1338 aaPredicted RBP14□□□□□ -0.17
PTPN20-228ENST00000513266 RNF181Q9P0P0 153 aa14□□□□□ -0.17
PTPN20-228ENST00000513266 NSD3Q9BZ95 1437 aa13.99□□□□□ -0.17
PTPN20-228ENST00000513266 TNRC18O15417 2968 aaPredicted RBP13.99□□□□□ -0.17
PTPN20-228ENST00000513266 MMP10P09238 476 aa13.99□□□□□ -0.17
PTPN20-228ENST00000513266 DPEP1P16444 411 aa13.99□□□□□ -0.17
PTPN20-228ENST00000513266 ZNF692Q9BU19 519 aaPredicted RBP13.99□□□□□ -0.17
PTPN20-228ENST00000513266 MEGF6O75095 1541 aa13.99□□□□□ -0.17
PTPN20-228ENST00000513266 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
PTPN20-228ENST00000513266 RGS19P49795 217 aa13.98□□□□□ -0.17
PTPN20-228ENST00000513266 ZCRB1Q8TBF4 217 aaKnown RBP13.98□□□□□ -0.17
PTPN20-228ENST00000513266 MKRN1Q9UHC7 482 aaKnown RBP13.98□□□□□ -0.17
PTPN20-228ENST00000513266 C4AP0C0L4 1744 aa13.98□□□□□ -0.17
PTPN20-228ENST00000513266 KCNA3P22001 575 aa13.97□□□□□ -0.17
PTPN20-228ENST00000513266 HMGB2P26583 209 aaKnown RBP13.97□□□□□ -0.17
PTPN20-228ENST00000513266 SSFA2P28290 1259 aa13.97□□□□□ -0.17
PTPN20-228ENST00000513266 CTCFP49711 727 aaPredicted RBP13.97□□□□□ -0.17
PTPN20-228ENST00000513266 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
PTPN20-228ENST00000513266 TIAM2Q8IVF5 1701 aa13.96□□□□□ -0.17
PTPN20-228ENST00000513266 VEGFAP15692 232 aaPredicted RBP13.95□□□□□ -0.18
PTPN20-228ENST00000513266 LBX1P52954 281 aa13.95□□□□□ -0.18
PTPN20-228ENST00000513266 DCAF5Q96JK2 942 aa13.95□□□□□ -0.18
PTPN20-228ENST00000513266 KTN1Q86UP2 1357 aaKnown RBP13.95□□□□□ -0.18
PTPN20-228ENST00000513266 LTV1Q96GA3 475 aaPredicted RBP13.94□□□□□ -0.18
PTPN20-228ENST00000513266 CREBZFQ9NS37 354 aa13.94□□□□□ -0.18
PTPN20-228ENST00000513266 NME9Q86XW9 330 aa13.93□□□□□ -0.18
PTPN20-228ENST00000513266 LINC00116Q8NCU8 138 aa13.93□□□□□ -0.18
PTPN20-228ENST00000513266 KDM6AO15550 1401 aaPredicted RBP13.92□□□□□ -0.18
PTPN20-228ENST00000513266 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.92□□□□□ -0.18
PTPN20-228ENST00000513266 IP6K1Q92551 441 aa13.92□□□□□ -0.18
PTPN20-228ENST00000513266 AIDAQ96BJ3 306 aa13.92□□□□□ -0.18
PTPN20-228ENST00000513266 CNTNAP1P78357 1384 aa13.92□□□□□ -0.18
PTPN20-228ENST00000513266 MPRIPQ6WCQ1 1025 aa13.91□□□□□ -0.18
PTPN20-228ENST00000513266 EVC2Q86UK5 1308 aa13.9□□□□□ -0.18
PTPN20-228ENST00000513266 ZC3H4Q9UPT8 1303 aaKnown RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms