RNA–Protein interactions for RNA: ENST00000513263.1

SKP2-207, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 2

Gene SKP2, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-207ENST00000513263 TIMELESSQ9UNS1 1208 aa15.32■□□□□ 0.04
SKP2-207ENST00000513263 FLT4P35916 1363 aa15.32■□□□□ 0.04
SKP2-207ENST00000513263 C5P01031 1676 aa15.32■□□□□ 0.04
SKP2-207ENST00000513263 SLC16A10Q8TF71 515 aa15.31■□□□□ 0.04
SKP2-207ENST00000513263 CLSPNQ9HAW4 1339 aa15.31■□□□□ 0.04
SKP2-207ENST00000513263 MEGF6O75095 1541 aa15.31■□□□□ 0.04
SKP2-207ENST00000513263 MAP2P11137 1827 aaKnown RBP15.3■□□□□ 0.04
SKP2-207ENST00000513263 PTGER2P43116 358 aa15.3■□□□□ 0.04
SKP2-207ENST00000513263 TAF1LQ8IZX4 1826 aa15.3■□□□□ 0.04
SKP2-207ENST00000513263 LTV1Q96GA3 475 aaPredicted RBP15.3■□□□□ 0.04
SKP2-207ENST00000513263 INSRP06213 1382 aa15.29■□□□□ 0.04
SKP2-207ENST00000513263 ZCRB1Q8TBF4 217 aaKnown RBP15.29■□□□□ 0.04
SKP2-207ENST00000513263 DDX54Q8TDD1 881 aaKnown RBP15.29■□□□□ 0.04
SKP2-207ENST00000513263 RAPGEF4Q8WZA2 1011 aa15.29■□□□□ 0.04
SKP2-207ENST00000513263 ITGB4P16144 1822 aa15.29■□□□□ 0.04
SKP2-207ENST00000513263 PCDH11XQ9BZA7 1347 aa15.27■□□□□ 0.04
SKP2-207ENST00000513263 PCDH11YQ9BZA8 1340 aa15.27■□□□□ 0.04
SKP2-207ENST00000513263 PLEKHG2Q9H7P9 1386 aa15.26■□□□□ 0.03
SKP2-207ENST00000513263 FYB1O15117 783 aa15.26■□□□□ 0.03
SKP2-207ENST00000513263 POLD1P28340 1107 aa15.26■□□□□ 0.03
SKP2-207ENST00000513263 SYTL4Q96C24 671 aaPredicted RBP15.26■□□□□ 0.03
SKP2-207ENST00000513263 ARXQ96QS3 562 aa15.26■□□□□ 0.03
SKP2-207ENST00000513263 SGIP1Q9BQI5 828 aa15.26■□□□□ 0.03
SKP2-207ENST00000513263 PDGFDQ9GZP0 370 aaPredicted RBP15.26■□□□□ 0.03
SKP2-207ENST00000513263 ATF5Q9Y2D1 282 aaPredicted RBP15.26■□□□□ 0.03
SKP2-207ENST00000513263 TATP17735 454 aaPredicted RBP15.25■□□□□ 0.03
SKP2-207ENST00000513263 SYT17Q9BSW7 474 aa15.25■□□□□ 0.03
SKP2-207ENST00000513263 FHDC1Q9C0D6 1143 aaPredicted RBP15.25■□□□□ 0.03
SKP2-207ENST00000513263 NSD2O96028 1365 aa15.24■□□□□ 0.03
SKP2-207ENST00000513263 AKT1S1Q96B36 256 aa15.24■□□□□ 0.03
SKP2-207ENST00000513263 GGNBP2Q9H3C7 697 aa15.24■□□□□ 0.03
SKP2-207ENST00000513263 NSD3Q9BZ95 1437 aa15.24■□□□□ 0.03
SKP2-207ENST00000513263 TOGARAM1Q9Y4F4 1720 aa15.23■□□□□ 0.03
SKP2-207ENST00000513263 RRS1Q15050 365 aaKnown RBP15.23■□□□□ 0.03
SKP2-207ENST00000513263 ZNF827Q17R98 1081 aa15.23■□□□□ 0.03
SKP2-207ENST00000513263 TFCP2L1Q9NZI6 479 aa15.23■□□□□ 0.03
SKP2-207ENST00000513263 PRIM1P49642 420 aaKnown RBP15.22■□□□□ 0.03
SKP2-207ENST00000513263 LRRC4BQ9NT99 713 aa15.22■□□□□ 0.03
SKP2-207ENST00000513263 CCNL1Q9UK58 526 aaPredicted RBP15.22■□□□□ 0.03
SKP2-207ENST00000513263 NCAPD2Q15021 1401 aa15.22■□□□□ 0.03
SKP2-207ENST00000513263 NBPF6Q5VWK0 638 aa15.21■□□□□ 0.03
SKP2-207ENST00000513263 NBPF4Q96M43 638 aa15.21■□□□□ 0.03
SKP2-207ENST00000513263 C4BP0C0L5 1744 aa15.2■□□□□ 0.02
SKP2-207ENST00000513263 PNPLA7Q6ZV29 1317 aa15.2■□□□□ 0.02
SKP2-207ENST00000513263 UBR3Q6ZT12 1888 aa15.2■□□□□ 0.02
SKP2-207ENST00000513263 FLAD1Q8NFF5 587 aa15.19■□□□□ 0.02
SKP2-207ENST00000513263 HSP90AB2PQ58FF8 381 aa15.18■□□□□ 0.02
SKP2-207ENST00000513263 SMARCC1Q92922 1105 aaPredicted RBP15.18■□□□□ 0.02
SKP2-207ENST00000513263 ZNF831Q5JPB2 1677 aa15.17■□□□□ 0.02
SKP2-207ENST00000513263 PALLDQ8WX93 1383 aa15.17■□□□□ 0.02
SKP2-207ENST00000513263 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.16■□□□□ 0.02
SKP2-207ENST00000513263 SPG7Q9UQ90 795 aa15.16■□□□□ 0.02
SKP2-207ENST00000513263 FBLN1P23142 703 aa15.15■□□□□ 0.02
SKP2-207ENST00000513263 USHBP1Q8N6Y0 703 aa15.15■□□□□ 0.02
SKP2-207ENST00000513263 WASHC2AQ641Q2 1341 aa15.15■□□□□ 0.02
SKP2-207ENST00000513263 GPR162Q16538 588 aa15.14■□□□□ 0.01
SKP2-207ENST00000513263 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
SKP2-207ENST00000513263 EMILIN1Q9Y6C2 1016 aa15.13■□□□□ 0.01
SKP2-207ENST00000513263 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
SKP2-207ENST00000513263 MSH5O43196 834 aa15.12■□□□□ 0.01
SKP2-207ENST00000513263 NKX1-1Q15270 411 aaPredicted RBP15.12■□□□□ 0.01
SKP2-207ENST00000513263 ZNF784Q8NCA9 323 aaPredicted RBP15.12■□□□□ 0.01
SKP2-207ENST00000513263 CARD14Q9BXL6 1004 aa15.12■□□□□ 0.01
SKP2-207ENST00000513263 CYP27B1O15528 508 aa15.11■□□□□ 0.01
SKP2-207ENST00000513263 GRIN3BO60391 1043 aa15.11■□□□□ 0.01
SKP2-207ENST00000513263 MPRIPQ6WCQ1 1025 aa15.11■□□□□ 0.01
SKP2-207ENST00000513263 AK7Q96M32 723 aa15.11■□□□□ 0.01
SKP2-207ENST00000513263 COL5A3P25940 1745 aaPredicted RBP15.1■□□□□ 0.01
SKP2-207ENST00000513263 EIF4G2P78344 907 aaKnown RBP eCLIP15.1■□□□□ 0.01
SKP2-207ENST00000513263 IFNL2Q8IZJ0 200 aa15.09■□□□□ 0.01
SKP2-207ENST00000513263 TMOD3Q9NYL9 352 aa15.09■□□□□ 0.01
SKP2-207ENST00000513263 VIRMAQ69YN4 1812 aaKnown RBP15.08■□□□□ 0.01
SKP2-207ENST00000513263 HSP90AB1P08238 724 aaKnown RBP15.08■□□□□ 0
SKP2-207ENST00000513263 SSFA2P28290 1259 aa15.08■□□□□ 0
SKP2-207ENST00000513263 KCNQ4P56696 695 aa15.08■□□□□ 0
SKP2-207ENST00000513263 COL23A1Q86Y22 540 aaPredicted RBP15.08■□□□□ 0
SKP2-207ENST00000513263 CD2APQ9Y5K6 639 aa15.08■□□□□ 0
SKP2-207ENST00000513263 KIF13BQ9NQT8 1826 aa15.08■□□□□ 0
SKP2-207ENST00000513263 CICQ96RK0 1608 aaPredicted RBP15.07■□□□□ 0
SKP2-207ENST00000513263 EYA1Q99502 592 aa15.06■□□□□ 0
SKP2-207ENST00000513263 POLKQ9UBT6 870 aa15.06■□□□□ 0
SKP2-207ENST00000513263 SCN11AQ9UI33 1791 aa15.06■□□□□ 0
SKP2-207ENST00000513263 LOC102724428A0A0B4J2F2 783 aa15.05■□□□□ -0
SKP2-207ENST00000513263 SIK1P57059 783 aa15.05■□□□□ -0
SKP2-207ENST00000513263 PELP1Q8IZL8 1130 aaKnown RBP15.05■□□□□ -0
SKP2-207ENST00000513263 POLR3GLQ9BT43 218 aa15.05■□□□□ -0
SKP2-207ENST00000513263 IGSF1Q8N6C5 1336 aa15.05■□□□□ -0
SKP2-207ENST00000513263 PHKG2P15735 406 aa15.04■□□□□ -0
SKP2-207ENST00000513263 PIGBQ92521 554 aa15.04■□□□□ -0
SKP2-207ENST00000513263 PCGF6Q9BYE7 350 aa15.04■□□□□ -0
SKP2-207ENST00000513263 EIF4A2Q14240 407 aaKnown RBP15.03■□□□□ -0
SKP2-207ENST00000513263 AMOTQ4VCS5 1084 aa15.03■□□□□ -0
SKP2-207ENST00000513263 NLGN2Q8NFZ4 835 aa15.03■□□□□ -0
SKP2-207ENST00000513263 C4AP0C0L4 1744 aa15.03■□□□□ -0
SKP2-207ENST00000513263 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.02■□□□□ -0
SKP2-207ENST00000513263 ERVV-2B6SEH9 535 aa15.02■□□□□ -0
SKP2-207ENST00000513263 GIGYF1O75420 1035 aaPredicted RBP15.02■□□□□ -0
SKP2-207ENST00000513263 MSL1Q68DK7 614 aa15.02■□□□□ -0
SKP2-207ENST00000513263 DCAF5Q96JK2 942 aa15.02■□□□□ -0
SKP2-207ENST00000513263 KDRP35968 1356 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms