RNA–Protein interactions for RNA: ENST00000512813.5

CLCN3-208, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-208ENST00000512813 ABHD8Q96I13 439 aa14.11□□□□□ -0.15
CLCN3-208ENST00000512813 CCDC61Q9Y6R9 512 aa14.11□□□□□ -0.15
CLCN3-208ENST00000512813 KDM2BQ8NHM5 1336 aa14.11□□□□□ -0.15
CLCN3-208ENST00000512813 KIAA1551Q9HCM1 1747 aa14.09□□□□□ -0.15
CLCN3-208ENST00000512813 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
CLCN3-208ENST00000512813 ARHGEF25Q86VW2 580 aa14.08□□□□□ -0.16
CLCN3-208ENST00000512813 C5P01031 1676 aa14.07□□□□□ -0.16
CLCN3-208ENST00000512813 NLRP6P59044 892 aa14.07□□□□□ -0.16
CLCN3-208ENST00000512813 FLAD1Q8NFF5 587 aa14.07□□□□□ -0.16
CLCN3-208ENST00000512813 CDK19Q9BWU1 502 aa14.07□□□□□ -0.16
CLCN3-208ENST00000512813 CCNL1Q9UK58 526 aaPredicted RBP14.07□□□□□ -0.16
CLCN3-208ENST00000512813 NSD2O96028 1365 aa14.07□□□□□ -0.16
CLCN3-208ENST00000512813 CTCFP49711 727 aaPredicted RBP14.06□□□□□ -0.16
CLCN3-208ENST00000512813 POTEDQ86YR6 584 aa14.06□□□□□ -0.16
CLCN3-208ENST00000512813 DOT1LQ8TEK3 1739 aa14.06□□□□□ -0.16
CLCN3-208ENST00000512813 TNRC18O15417 2968 aaPredicted RBP14.06□□□□□ -0.16
CLCN3-208ENST00000512813 KIF13BQ9NQT8 1826 aa14.06□□□□□ -0.16
CLCN3-208ENST00000512813 IL2RBP14784 551 aa14.05□□□□□ -0.16
CLCN3-208ENST00000512813 C9orf131Q5VYM1 1079 aa14.05□□□□□ -0.16
CLCN3-208ENST00000512813 RRAGCQ9HB90 399 aa14.05□□□□□ -0.16
CLCN3-208ENST00000512813 ANKRD36BQ8N2N9 1353 aa14.05□□□□□ -0.16
CLCN3-208ENST00000512813 ARHGAP27Q6ZUM4 889 aa14.04□□□□□ -0.16
CLCN3-208ENST00000512813 BCS1LQ9Y276 419 aa14.03□□□□□ -0.16
CLCN3-208ENST00000512813 NFAT5O94916 1531 aa14.03□□□□□ -0.16
CLCN3-208ENST00000512813 TOGARAM1Q9Y4F4 1720 aa14.03□□□□□ -0.16
CLCN3-208ENST00000512813 N4BP2Q86UW6 1770 aaPredicted RBP14.02□□□□□ -0.16
CLCN3-208ENST00000512813 LOC105371045A0A1W2PR82 267 aa14.02□□□□□ -0.17
CLCN3-208ENST00000512813 BRCA1P38398 1863 aaKnown RBP14.01□□□□□ -0.17
CLCN3-208ENST00000512813 AIDAQ96BJ3 306 aa14.01□□□□□ -0.17
CLCN3-208ENST00000512813 TAF1LQ8IZX4 1826 aa14.01□□□□□ -0.17
CLCN3-208ENST00000512813 ERBB3P21860 1342 aa14□□□□□ -0.17
CLCN3-208ENST00000512813 ARFGEF1Q9Y6D6 1849 aa14□□□□□ -0.17
CLCN3-208ENST00000512813 PRIM1P49642 420 aaKnown RBP14□□□□□ -0.17
CLCN3-208ENST00000512813 KCNH5Q8NCM2 988 aa14□□□□□ -0.17
CLCN3-208ENST00000512813 SYTL4Q96C24 671 aaPredicted RBP14□□□□□ -0.17
CLCN3-208ENST00000512813 MKRN1Q9UHC7 482 aaKnown RBP13.99□□□□□ -0.17
CLCN3-208ENST00000512813 CCDC85CA6NKD9 419 aa13.98□□□□□ -0.17
CLCN3-208ENST00000512813 HMGB2P26583 209 aaKnown RBP13.98□□□□□ -0.17
CLCN3-208ENST00000512813 LBX1P52954 281 aa13.98□□□□□ -0.17
CLCN3-208ENST00000512813 TGFB2P61812 414 aa13.98□□□□□ -0.17
CLCN3-208ENST00000512813 CREBZFQ9NS37 354 aa13.98□□□□□ -0.17
CLCN3-208ENST00000512813 NLRP2Q9NX02 1062 aa13.98□□□□□ -0.17
CLCN3-208ENST00000512813 C4BP0C0L5 1744 aa13.98□□□□□ -0.17
CLCN3-208ENST00000512813 UBR3Q6ZT12 1888 aa13.97□□□□□ -0.17
CLCN3-208ENST00000512813 USP47Q96K76 1375 aa13.97□□□□□ -0.17
CLCN3-208ENST00000512813 RNF181Q9P0P0 153 aa13.97□□□□□ -0.17
CLCN3-208ENST00000512813 NSD3Q9BZ95 1437 aa13.97□□□□□ -0.17
CLCN3-208ENST00000512813 CNTNAP1P78357 1384 aa13.96□□□□□ -0.17
CLCN3-208ENST00000512813 DDX54Q8TDD1 881 aaKnown RBP13.96□□□□□ -0.17
CLCN3-208ENST00000512813 FCHSD2O94868 740 aa13.95□□□□□ -0.18
CLCN3-208ENST00000512813 AMIGO3Q86WK7 504 aa13.95□□□□□ -0.18
CLCN3-208ENST00000512813 ZC3H4Q9UPT8 1303 aaKnown RBP13.94□□□□□ -0.18
CLCN3-208ENST00000512813 A0A0G2JLW4 131 aa13.94□□□□□ -0.18
CLCN3-208ENST00000512813 VEGFAP15692 232 aaPredicted RBP13.94□□□□□ -0.18
CLCN3-208ENST00000512813 SOX12O15370 315 aa13.93□□□□□ -0.18
CLCN3-208ENST00000512813 HSPA8P11142 646 aaKnown RBP13.93□□□□□ -0.18
CLCN3-208ENST00000512813 WBP1LQ9NX94 342 aa13.93□□□□□ -0.18
CLCN3-208ENST00000512813 SBF1O95248 1867 aa13.93□□□□□ -0.18
CLCN3-208ENST00000512813 VIRMAQ69YN4 1812 aaKnown RBP13.92□□□□□ -0.18
CLCN3-208ENST00000512813 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
CLCN3-208ENST00000512813 AK7Q96M32 723 aa13.91□□□□□ -0.18
CLCN3-208ENST00000512813 PHF14O94880 888 aa13.9□□□□□ -0.18
CLCN3-208ENST00000512813 MMP10P09238 476 aa13.9□□□□□ -0.18
CLCN3-208ENST00000512813 DPEP1P16444 411 aa13.9□□□□□ -0.18
CLCN3-208ENST00000512813 SMIM5Q71RC9 77 aa13.9□□□□□ -0.18
CLCN3-208ENST00000512813 DCAF5Q96JK2 942 aa13.9□□□□□ -0.18
CLCN3-208ENST00000512813 KDM6AO15550 1401 aaPredicted RBP13.9□□□□□ -0.19
CLCN3-208ENST00000512813 FAM208AQ9UK61 1670 aaKnown RBP13.89□□□□□ -0.19
CLCN3-208ENST00000512813 PALLDQ8WX93 1383 aa13.89□□□□□ -0.19
CLCN3-208ENST00000512813 SSFA2P28290 1259 aa13.89□□□□□ -0.19
CLCN3-208ENST00000512813 SRPK2P78362 688 aaKnown RBP13.89□□□□□ -0.19
CLCN3-208ENST00000512813 MPHOSPH9Q99550 1183 aa13.89□□□□□ -0.19
CLCN3-208ENST00000512813 LTN1O94822 1766 aa13.88□□□□□ -0.19
CLCN3-208ENST00000512813 GLTPD2A6NH11 291 aa13.88□□□□□ -0.19
CLCN3-208ENST00000512813 ANKRD24Q8TF21 1146 aa13.88□□□□□ -0.19
CLCN3-208ENST00000512813 VEGFBP49765 207 aa13.87□□□□□ -0.19
CLCN3-208ENST00000512813 CABP1Q9NZU7 370 aa13.87□□□□□ -0.19
CLCN3-208ENST00000512813 TTC21BQ7Z4L5 1316 aa13.87□□□□□ -0.19
CLCN3-208ENST00000512813 KCNA3P22001 575 aa13.86□□□□□ -0.19
CLCN3-208ENST00000512813 C4AP0C0L4 1744 aa13.86□□□□□ -0.19
CLCN3-208ENST00000512813 TIAM2Q8IVF5 1701 aa13.86□□□□□ -0.19
CLCN3-208ENST00000512813 TTC21AQ8NDW8 1320 aa13.86□□□□□ -0.19
CLCN3-208ENST00000512813 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
CLCN3-208ENST00000512813 PRPF38BQ5VTL8 546 aaKnown RBP13.84□□□□□ -0.19
CLCN3-208ENST00000512813 CCDC87Q9NVE4 849 aa13.84□□□□□ -0.19
CLCN3-208ENST00000512813 PIM2Q9P1W9 311 aa13.84□□□□□ -0.19
CLCN3-208ENST00000512813 DALRD3Q5D0E6 543 aaKnown RBP13.83□□□□□ -0.2
CLCN3-208ENST00000512813 CHADLQ6NUI6 762 aa13.83□□□□□ -0.2
CLCN3-208ENST00000512813 POTECB2RU33 542 aa13.82□□□□□ -0.2
CLCN3-208ENST00000512813 ZCRB1Q8TBF4 217 aaKnown RBP13.82□□□□□ -0.2
CLCN3-208ENST00000512813 CFAP44Q96MT7 982 aa13.82□□□□□ -0.2
CLCN3-208ENST00000512813 MAP2K1Q02750 393 aaPredicted RBP13.81□□□□□ -0.2
CLCN3-208ENST00000512813 THSD7BQ9C0I4 1608 aa13.81□□□□□ -0.2
CLCN3-208ENST00000512813 PASKQ96RG2 1323 aa13.81□□□□□ -0.2
CLCN3-208ENST00000512813 MEGF6O75095 1541 aa13.8□□□□□ -0.2
CLCN3-208ENST00000512813 STAC3Q96MF2 364 aa13.8□□□□□ -0.2
CLCN3-208ENST00000512813 KDM2AQ9Y2K7 1162 aa13.8□□□□□ -0.2
CLCN3-208ENST00000512813 MAP2P11137 1827 aaKnown RBP13.8□□□□□ -0.2
CLCN3-208ENST00000512813 LMNB1P20700 586 aa13.79□□□□□ -0.2
CLCN3-208ENST00000512813 RASSF7Q02833 373 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms